GO Enrichment Analysis of Co-expressed Genes with
AT1G34310
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 2 | GO:2000121: regulation of removal of superoxide radicals | 0.00E+00 |
| 3 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 4 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 5 | GO:0015979: photosynthesis | 1.04E-17 |
| 6 | GO:0042742: defense response to bacterium | 2.44E-09 |
| 7 | GO:0019253: reductive pentose-phosphate cycle | 4.95E-09 |
| 8 | GO:0009409: response to cold | 9.28E-09 |
| 9 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 1.24E-07 |
| 10 | GO:0015995: chlorophyll biosynthetic process | 3.27E-07 |
| 11 | GO:0009773: photosynthetic electron transport in photosystem I | 3.99E-07 |
| 12 | GO:0018119: peptidyl-cysteine S-nitrosylation | 3.99E-07 |
| 13 | GO:0006000: fructose metabolic process | 4.81E-07 |
| 14 | GO:0010207: photosystem II assembly | 8.28E-07 |
| 15 | GO:0015976: carbon utilization | 2.26E-06 |
| 16 | GO:0042549: photosystem II stabilization | 5.95E-06 |
| 17 | GO:0009772: photosynthetic electron transport in photosystem II | 1.19E-05 |
| 18 | GO:0006002: fructose 6-phosphate metabolic process | 2.05E-05 |
| 19 | GO:0010206: photosystem II repair | 2.58E-05 |
| 20 | GO:0043489: RNA stabilization | 4.45E-05 |
| 21 | GO:0006094: gluconeogenesis | 6.27E-05 |
| 22 | GO:0005986: sucrose biosynthetic process | 6.27E-05 |
| 23 | GO:0055114: oxidation-reduction process | 7.29E-05 |
| 24 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.17E-04 |
| 25 | GO:0015986: ATP synthesis coupled proton transport | 2.39E-04 |
| 26 | GO:0009735: response to cytokinin | 2.70E-04 |
| 27 | GO:0051513: regulation of monopolar cell growth | 2.78E-04 |
| 28 | GO:0071484: cellular response to light intensity | 2.78E-04 |
| 29 | GO:0019464: glycine decarboxylation via glycine cleavage system | 3.73E-04 |
| 30 | GO:0045727: positive regulation of translation | 3.73E-04 |
| 31 | GO:2000122: negative regulation of stomatal complex development | 3.73E-04 |
| 32 | GO:0006546: glycine catabolic process | 3.73E-04 |
| 33 | GO:0010037: response to carbon dioxide | 3.73E-04 |
| 34 | GO:0034052: positive regulation of plant-type hypersensitive response | 4.75E-04 |
| 35 | GO:0032543: mitochondrial translation | 4.75E-04 |
| 36 | GO:0009817: defense response to fungus, incompatible interaction | 5.18E-04 |
| 37 | GO:0018298: protein-chromophore linkage | 5.18E-04 |
| 38 | GO:0010189: vitamin E biosynthetic process | 6.94E-04 |
| 39 | GO:0010196: nonphotochemical quenching | 8.11E-04 |
| 40 | GO:0010114: response to red light | 8.29E-04 |
| 41 | GO:0043068: positive regulation of programmed cell death | 9.32E-04 |
| 42 | GO:0009657: plastid organization | 1.06E-03 |
| 43 | GO:0032544: plastid translation | 1.06E-03 |
| 44 | GO:0006754: ATP biosynthetic process | 1.19E-03 |
| 45 | GO:0006096: glycolytic process | 1.29E-03 |
| 46 | GO:0006396: RNA processing | 1.58E-03 |
| 47 | GO:0019684: photosynthesis, light reaction | 1.61E-03 |
| 48 | GO:0009089: lysine biosynthetic process via diaminopimelate | 1.61E-03 |
| 49 | GO:0000272: polysaccharide catabolic process | 1.61E-03 |
| 50 | GO:0009750: response to fructose | 1.61E-03 |
| 51 | GO:0006006: glucose metabolic process | 1.92E-03 |
| 52 | GO:0005985: sucrose metabolic process | 2.25E-03 |
| 53 | GO:0006636: unsaturated fatty acid biosynthetic process | 2.42E-03 |
| 54 | GO:0009814: defense response, incompatible interaction | 3.14E-03 |
| 55 | GO:0042631: cellular response to water deprivation | 3.93E-03 |
| 56 | GO:0000413: protein peptidyl-prolyl isomerization | 3.93E-03 |
| 57 | GO:0042254: ribosome biogenesis | 4.12E-03 |
| 58 | GO:0009749: response to glucose | 4.56E-03 |
| 59 | GO:0019252: starch biosynthetic process | 4.56E-03 |
| 60 | GO:0045454: cell redox homeostasis | 5.99E-03 |
| 61 | GO:0009627: systemic acquired resistance | 6.64E-03 |
| 62 | GO:0042128: nitrate assimilation | 6.64E-03 |
| 63 | GO:0006397: mRNA processing | 7.69E-03 |
| 64 | GO:0010218: response to far red light | 7.91E-03 |
| 65 | GO:0009631: cold acclimation | 8.18E-03 |
| 66 | GO:0010119: regulation of stomatal movement | 8.18E-03 |
| 67 | GO:0009637: response to blue light | 8.71E-03 |
| 68 | GO:0045087: innate immune response | 8.71E-03 |
| 69 | GO:0016051: carbohydrate biosynthetic process | 8.71E-03 |
| 70 | GO:0009744: response to sucrose | 1.04E-02 |
| 71 | GO:0006364: rRNA processing | 1.28E-02 |
| 72 | GO:0006417: regulation of translation | 1.38E-02 |
| 73 | GO:0009626: plant-type hypersensitive response | 1.51E-02 |
| 74 | GO:0009740: gibberellic acid mediated signaling pathway | 1.58E-02 |
| 75 | GO:0006633: fatty acid biosynthetic process | 2.27E-02 |
| 76 | GO:0007623: circadian rhythm | 2.43E-02 |
| 77 | GO:0009451: RNA modification | 2.47E-02 |
| 78 | GO:0009739: response to gibberellin | 2.63E-02 |
| 79 | GO:0010468: regulation of gene expression | 2.76E-02 |
| 80 | GO:0009658: chloroplast organization | 3.32E-02 |
| 81 | GO:0080167: response to karrikin | 3.87E-02 |
| 82 | GO:0006810: transport | 3.90E-02 |
| 83 | GO:0006412: translation | 4.04E-02 |
| 84 | GO:0032259: methylation | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 2 | GO:0045550: geranylgeranyl reductase activity | 0.00E+00 |
| 3 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 4 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 5 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 1.24E-07 |
| 6 | GO:0051920: peroxiredoxin activity | 8.63E-06 |
| 7 | GO:0016209: antioxidant activity | 1.59E-05 |
| 8 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 4.45E-05 |
| 9 | GO:0051537: 2 iron, 2 sulfur cluster binding | 5.45E-05 |
| 10 | GO:0004089: carbonate dehydratase activity | 6.27E-05 |
| 11 | GO:0008266: poly(U) RNA binding | 7.22E-05 |
| 12 | GO:0031409: pigment binding | 9.34E-05 |
| 13 | GO:0042389: omega-3 fatty acid desaturase activity | 1.10E-04 |
| 14 | GO:0004618: phosphoglycerate kinase activity | 1.10E-04 |
| 15 | GO:0010297: heteropolysaccharide binding | 1.10E-04 |
| 16 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 1.10E-04 |
| 17 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 1.10E-04 |
| 18 | GO:0019843: rRNA binding | 1.75E-04 |
| 19 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 1.89E-04 |
| 20 | GO:0004324: ferredoxin-NADP+ reductase activity | 1.89E-04 |
| 21 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 1.89E-04 |
| 22 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 2.22E-04 |
| 23 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 2.78E-04 |
| 24 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 2.78E-04 |
| 25 | GO:0016851: magnesium chelatase activity | 2.78E-04 |
| 26 | GO:0016168: chlorophyll binding | 4.21E-04 |
| 27 | GO:0003959: NADPH dehydrogenase activity | 4.75E-04 |
| 28 | GO:0042578: phosphoric ester hydrolase activity | 5.82E-04 |
| 29 | GO:0004602: glutathione peroxidase activity | 6.94E-04 |
| 30 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 1.06E-03 |
| 31 | GO:0030234: enzyme regulator activity | 1.47E-03 |
| 32 | GO:0031072: heat shock protein binding | 1.92E-03 |
| 33 | GO:0004176: ATP-dependent peptidase activity | 2.96E-03 |
| 34 | GO:0003756: protein disulfide isomerase activity | 3.53E-03 |
| 35 | GO:0003727: single-stranded RNA binding | 3.53E-03 |
| 36 | GO:0004601: peroxidase activity | 4.04E-03 |
| 37 | GO:0050662: coenzyme binding | 4.35E-03 |
| 38 | GO:0009055: electron carrier activity | 7.91E-03 |
| 39 | GO:0050661: NADP binding | 9.55E-03 |
| 40 | GO:0043621: protein self-association | 1.10E-02 |
| 41 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.16E-02 |
| 42 | GO:0051287: NAD binding | 1.19E-02 |
| 43 | GO:0003735: structural constituent of ribosome | 1.21E-02 |
| 44 | GO:0003690: double-stranded DNA binding | 1.32E-02 |
| 45 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 1.48E-02 |
| 46 | GO:0051082: unfolded protein binding | 1.65E-02 |
| 47 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.97E-02 |
| 48 | GO:0005509: calcium ion binding | 2.46E-02 |
| 49 | GO:0016788: hydrolase activity, acting on ester bonds | 3.36E-02 |
| 50 | GO:0008233: peptidase activity | 3.82E-02 |
| 51 | GO:0003729: mRNA binding | 3.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 8.43E-32 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 1.02E-30 |
| 4 | GO:0009941: chloroplast envelope | 8.63E-24 |
| 5 | GO:0009579: thylakoid | 5.98E-22 |
| 6 | GO:0009570: chloroplast stroma | 8.49E-21 |
| 7 | GO:0009534: chloroplast thylakoid | 3.94E-20 |
| 8 | GO:0010319: stromule | 9.03E-14 |
| 9 | GO:0048046: apoplast | 3.20E-09 |
| 10 | GO:0009543: chloroplast thylakoid lumen | 4.55E-09 |
| 11 | GO:0030095: chloroplast photosystem II | 4.95E-09 |
| 12 | GO:0010287: plastoglobule | 1.96E-07 |
| 13 | GO:0009706: chloroplast inner membrane | 5.23E-06 |
| 14 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 5.95E-06 |
| 15 | GO:0031977: thylakoid lumen | 4.26E-05 |
| 16 | GO:0009783: photosystem II antenna complex | 4.45E-05 |
| 17 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 1.10E-04 |
| 18 | GO:0042170: plastid membrane | 1.10E-04 |
| 19 | GO:0009654: photosystem II oxygen evolving complex | 1.17E-04 |
| 20 | GO:0010007: magnesium chelatase complex | 1.89E-04 |
| 21 | GO:0009522: photosystem I | 2.39E-04 |
| 22 | GO:0019898: extrinsic component of membrane | 2.57E-04 |
| 23 | GO:0009523: photosystem II | 2.57E-04 |
| 24 | GO:0005960: glycine cleavage complex | 2.78E-04 |
| 25 | GO:0009544: chloroplast ATP synthase complex | 3.73E-04 |
| 26 | GO:0031969: chloroplast membrane | 6.28E-04 |
| 27 | GO:0009538: photosystem I reaction center | 9.32E-04 |
| 28 | GO:0005840: ribosome | 9.85E-04 |
| 29 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.19E-03 |
| 30 | GO:0016020: membrane | 1.39E-03 |
| 31 | GO:0030076: light-harvesting complex | 2.25E-03 |
| 32 | GO:0042651: thylakoid membrane | 2.77E-03 |
| 33 | GO:0015935: small ribosomal subunit | 2.96E-03 |
| 34 | GO:0030529: intracellular ribonucleoprotein complex | 6.15E-03 |
| 35 | GO:0005618: cell wall | 2.88E-02 |