co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G32230

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006987: activation of signaling protein activity involved in unfolded protein response	0.00E+00
2	GO:0036258: multivesicular body assembly	0.00E+00
3	GO:0048227: plasma membrane to endosome transport	0.00E+00
4	GO:0009991: response to extracellular stimulus	0.00E+00
5	GO:0080169: cellular response to boron-containing substance deprivation	0.00E+00
6	GO:0000169: activation of MAPK activity involved in osmosensory signaling pathway	0.00E+00
7	GO:0032780: negative regulation of ATPase activity	0.00E+00
8	GO:0006482: protein demethylation	0.00E+00
9	GO:0010111: glyoxysome organization	0.00E+00
10	GO:1900103: positive regulation of endoplasmic reticulum unfolded protein response	0.00E+00
11	GO:0015031: protein transport	1.90E-08
12	GO:0006914: autophagy	1.73E-05
13	GO:0006542: glutamine biosynthetic process	3.53E-05
14	GO:0035344: hypoxanthine transport	2.22E-04
15	GO:0080136: priming of cellular response to stress	2.22E-04
16	GO:0034214: protein hexamerization	2.22E-04
17	GO:0010265: SCF complex assembly	2.22E-04
18	GO:0071806: protein transmembrane transport	2.22E-04
19	GO:0098721: uracil import across plasma membrane	2.22E-04
20	GO:0042759: long-chain fatty acid biosynthetic process	2.22E-04
21	GO:0006144: purine nucleobase metabolic process	2.22E-04
22	GO:0010201: response to continuous far red light stimulus by the high-irradiance response system	2.22E-04
23	GO:0098702: adenine import across plasma membrane	2.22E-04
24	GO:0098710: guanine import across plasma membrane	2.22E-04
25	GO:0006805: xenobiotic metabolic process	2.22E-04
26	GO:0019628: urate catabolic process	2.22E-04
27	GO:0080173: male-female gamete recognition during double fertilization	2.22E-04
28	GO:0006481: C-terminal protein methylation	2.22E-04
29	GO:0030968: endoplasmic reticulum unfolded protein response	2.40E-04
30	GO:0010200: response to chitin	4.31E-04
31	GO:0019483: beta-alanine biosynthetic process	4.95E-04
32	GO:1902000: homogentisate catabolic process	4.95E-04
33	GO:0051258: protein polymerization	4.95E-04
34	GO:0019395: fatty acid oxidation	4.95E-04
35	GO:0031648: protein destabilization	4.95E-04
36	GO:0071395: cellular response to jasmonic acid stimulus	4.95E-04
37	GO:1905182: positive regulation of urease activity	4.95E-04
38	GO:0019521: D-gluconate metabolic process	4.95E-04
39	GO:0006212: uracil catabolic process	4.95E-04
40	GO:0019374: galactolipid metabolic process	4.95E-04
41	GO:0030010: establishment of cell polarity	4.95E-04
42	GO:0010359: regulation of anion channel activity	8.05E-04
43	GO:0006556: S-adenosylmethionine biosynthetic process	8.05E-04
44	GO:0043617: cellular response to sucrose starvation	8.05E-04
45	GO:0045039: protein import into mitochondrial inner membrane	8.05E-04
46	GO:0009072: aromatic amino acid family metabolic process	8.05E-04
47	GO:0030150: protein import into mitochondrial matrix	9.41E-04
48	GO:0070676: intralumenal vesicle formation	1.15E-03
49	GO:0046513: ceramide biosynthetic process	1.15E-03
50	GO:0006624: vacuolar protein processing	1.15E-03
51	GO:0009399: nitrogen fixation	1.15E-03
52	GO:0030433: ubiquitin-dependent ERAD pathway	1.24E-03
53	GO:0031348: negative regulation of defense response	1.24E-03
54	GO:0006468: protein phosphorylation	1.40E-03
55	GO:0051603: proteolysis involved in cellular protein catabolic process	1.42E-03
56	GO:2000038: regulation of stomatal complex development	1.53E-03
57	GO:0042991: transcription factor import into nucleus	1.53E-03
58	GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA	1.53E-03
59	GO:0006878: cellular copper ion homeostasis	1.53E-03
60	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.58E-03
61	GO:0046686: response to cadmium ion	1.61E-03
62	GO:0042631: cellular response to water deprivation	1.71E-03
63	GO:0016094: polyprenol biosynthetic process	1.95E-03
64	GO:0009738: abscisic acid-activated signaling pathway	2.09E-03
65	GO:0010183: pollen tube guidance	2.12E-03
66	GO:0046777: protein autophosphorylation	2.24E-03
67	GO:0006635: fatty acid beta-oxidation	2.26E-03
68	GO:1900425: negative regulation of defense response to bacterium	2.40E-03
69	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	2.40E-03
70	GO:0002238: response to molecule of fungal origin	2.40E-03
71	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	2.40E-03
72	GO:0006751: glutathione catabolic process	2.40E-03
73	GO:0070814: hydrogen sulfide biosynthetic process	2.40E-03
74	GO:0010358: leaf shaping	2.40E-03
75	GO:1902456: regulation of stomatal opening	2.40E-03
76	GO:0006464: cellular protein modification process	2.74E-03
77	GO:2000037: regulation of stomatal complex patterning	2.89E-03
78	GO:0000911: cytokinesis by cell plate formation	2.89E-03
79	GO:0015937: coenzyme A biosynthetic process	3.40E-03
80	GO:0009610: response to symbiotic fungus	3.40E-03
81	GO:0006955: immune response	3.40E-03
82	GO:0046470: phosphatidylcholine metabolic process	3.40E-03
83	GO:0071446: cellular response to salicylic acid stimulus	3.40E-03
84	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	3.40E-03
85	GO:0009790: embryo development	3.44E-03
86	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.45E-03
87	GO:0042128: nitrate assimilation	3.64E-03
88	GO:0006950: response to stress	3.84E-03
89	GO:0006605: protein targeting	3.94E-03
90	GO:0006102: isocitrate metabolic process	3.94E-03
91	GO:0006644: phospholipid metabolic process	3.94E-03
92	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	3.94E-03
93	GO:0010120: camalexin biosynthetic process	4.51E-03
94	GO:0043562: cellular response to nitrogen levels	4.51E-03
95	GO:0009880: embryonic pattern specification	4.51E-03
96	GO:0048527: lateral root development	4.91E-03
97	GO:0010119: regulation of stomatal movement	4.91E-03
98	GO:0090333: regulation of stomatal closure	5.11E-03
99	GO:0006098: pentose-phosphate shunt	5.11E-03
100	GO:0009867: jasmonic acid mediated signaling pathway	5.38E-03
101	GO:0009873: ethylene-activated signaling pathway	5.41E-03
102	GO:0008202: steroid metabolic process	5.74E-03
103	GO:0042761: very long-chain fatty acid biosynthetic process	5.74E-03
104	GO:2000280: regulation of root development	5.74E-03
105	GO:0019538: protein metabolic process	6.38E-03
106	GO:0000103: sulfate assimilation	6.38E-03
107	GO:0006631: fatty acid metabolic process	6.39E-03
108	GO:0072593: reactive oxygen species metabolic process	7.06E-03
109	GO:0043085: positive regulation of catalytic activity	7.06E-03
110	GO:0010072: primary shoot apical meristem specification	7.06E-03
111	GO:0006970: response to osmotic stress	8.16E-03
112	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	8.40E-03
113	GO:0006626: protein targeting to mitochondrion	8.48E-03
114	GO:0006807: nitrogen compound metabolic process	8.48E-03
115	GO:0010229: inflorescence development	8.48E-03
116	GO:0055046: microgametogenesis	8.48E-03
117	GO:0007049: cell cycle	8.55E-03
118	GO:0042538: hyperosmotic salinity response	8.71E-03
119	GO:0009723: response to ethylene	8.94E-03
120	GO:0009611: response to wounding	9.06E-03
121	GO:0048366: leaf development	9.14E-03
122	GO:0007034: vacuolar transport	9.23E-03
123	GO:0009887: animal organ morphogenesis	9.23E-03
124	GO:0009736: cytokinin-activated signaling pathway	9.36E-03
125	GO:0046854: phosphatidylinositol phosphorylation	1.00E-02
126	GO:0007031: peroxisome organization	1.00E-02
127	GO:0009825: multidimensional cell growth	1.00E-02
128	GO:0006417: regulation of translation	1.04E-02
129	GO:0048367: shoot system development	1.14E-02
130	GO:0009695: jasmonic acid biosynthetic process	1.24E-02
131	GO:0061077: chaperone-mediated protein folding	1.33E-02
132	GO:0031408: oxylipin biosynthetic process	1.33E-02
133	GO:0006730: one-carbon metabolic process	1.42E-02
134	GO:0080092: regulation of pollen tube growth	1.42E-02
135	GO:0009814: defense response, incompatible interaction	1.42E-02
136	GO:0009693: ethylene biosynthetic process	1.51E-02
137	GO:0071215: cellular response to abscisic acid stimulus	1.51E-02
138	GO:0016042: lipid catabolic process	1.55E-02
139	GO:0009561: megagametogenesis	1.60E-02
140	GO:0009306: protein secretion	1.60E-02
141	GO:0048364: root development	1.69E-02
142	GO:0006397: mRNA processing	1.69E-02
143	GO:0070417: cellular response to cold	1.70E-02
144	GO:0042147: retrograde transport, endosome to Golgi	1.70E-02
145	GO:0010087: phloem or xylem histogenesis	1.79E-02
146	GO:0009845: seed germination	1.81E-02
147	GO:0050832: defense response to fungus	1.83E-02
148	GO:0071472: cellular response to salt stress	1.89E-02
149	GO:0010154: fruit development	1.89E-02
150	GO:0010197: polar nucleus fusion	1.89E-02
151	GO:0016567: protein ubiquitination	1.91E-02
152	GO:0042752: regulation of circadian rhythm	1.99E-02
153	GO:0009646: response to absence of light	1.99E-02
154	GO:0048825: cotyledon development	2.09E-02
155	GO:0055072: iron ion homeostasis	2.09E-02
156	GO:0006623: protein targeting to vacuole	2.09E-02
157	GO:0002229: defense response to oomycetes	2.19E-02
158	GO:0006891: intra-Golgi vesicle-mediated transport	2.19E-02
159	GO:0040008: regulation of growth	2.21E-02
160	GO:0007264: small GTPase mediated signal transduction	2.30E-02
161	GO:0010583: response to cyclopentenone	2.30E-02
162	GO:0010150: leaf senescence	2.31E-02
163	GO:0071281: cellular response to iron ion	2.41E-02
164	GO:0009734: auxin-activated signaling pathway	2.47E-02
165	GO:0006904: vesicle docking involved in exocytosis	2.63E-02
166	GO:0006470: protein dephosphorylation	2.65E-02
167	GO:0007166: cell surface receptor signaling pathway	2.65E-02
168	GO:0051607: defense response to virus	2.74E-02
169	GO:0009617: response to bacterium	2.76E-02
170	GO:0010468: regulation of gene expression	2.76E-02
171	GO:0009816: defense response to bacterium, incompatible interaction	2.97E-02
172	GO:0048573: photoperiodism, flowering	3.20E-02
173	GO:0055114: oxidation-reduction process	3.37E-02
174	GO:0009817: defense response to fungus, incompatible interaction	3.45E-02
175	GO:0048481: plant ovule development	3.45E-02
176	GO:0009407: toxin catabolic process	3.70E-02
177	GO:0007568: aging	3.82E-02
178	GO:0009860: pollen tube growth	3.85E-02
179	GO:0009409: response to cold	3.93E-02
180	GO:0006099: tricarboxylic acid cycle	4.21E-02
181	GO:0009744: response to sucrose	4.88E-02
182	GO:0051707: response to other organism	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0016508: long-chain-enoyl-CoA hydratase activity	0.00E+00
2	GO:0004846: urate oxidase activity	0.00E+00
3	GO:0051723: protein methylesterase activity	0.00E+00
4	GO:0004157: dihydropyrimidinase activity	0.00E+00
5	GO:0042030: ATPase inhibitor activity	0.00E+00
6	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
7	GO:0033550: MAP kinase tyrosine phosphatase activity	0.00E+00
8	GO:0005524: ATP binding	1.62E-06
9	GO:0005515: protein binding	2.70E-06
10	GO:0004356: glutamate-ammonia ligase activity	5.65E-05
11	GO:0004674: protein serine/threonine kinase activity	1.10E-04
12	GO:0004620: phospholipase activity	1.52E-04
13	GO:0015207: adenine transmembrane transporter activity	2.22E-04
14	GO:0019786: Atg8-specific protease activity	2.22E-04
15	GO:0004671: protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity	2.22E-04
16	GO:0008692: 3-hydroxybutyryl-CoA epimerase activity	2.22E-04
17	GO:0015208: guanine transmembrane transporter activity	2.22E-04
18	GO:0015294: solute:cation symporter activity	2.22E-04
19	GO:0019779: Atg8 activating enzyme activity	4.95E-04
20	GO:0001077: transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	4.95E-04
21	GO:0003988: acetyl-CoA C-acyltransferase activity	4.95E-04
22	GO:0004450: isocitrate dehydrogenase (NADP+) activity	4.95E-04
23	GO:0050291: sphingosine N-acyltransferase activity	4.95E-04
24	GO:0004594: pantothenate kinase activity	4.95E-04
25	GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity	4.95E-04
26	GO:0015266: protein channel activity	6.09E-04
27	GO:0003840: gamma-glutamyltransferase activity	8.05E-04
28	GO:0036374: glutathione hydrolase activity	8.05E-04
29	GO:0004781: sulfate adenylyltransferase (ATP) activity	8.05E-04
30	GO:0016805: dipeptidase activity	8.05E-04
31	GO:0004478: methionine adenosyltransferase activity	8.05E-04
32	GO:0005093: Rab GDP-dissociation inhibitor activity	8.05E-04
33	GO:0003863: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity	8.05E-04
34	GO:0016151: nickel cation binding	8.05E-04
35	GO:0005047: signal recognition particle binding	8.05E-04
36	GO:0003924: GTPase activity	8.11E-04
37	GO:0043130: ubiquitin binding	9.41E-04
38	GO:0004165: dodecenoyl-CoA delta-isomerase activity	1.15E-03
39	GO:0004300: enoyl-CoA hydratase activity	1.15E-03
40	GO:0016301: kinase activity	1.15E-03
41	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	1.15E-03
42	GO:0000285: 1-phosphatidylinositol-3-phosphate 5-kinase activity	1.15E-03
43	GO:0004416: hydroxyacylglutathione hydrolase activity	1.15E-03
44	GO:0019776: Atg8 ligase activity	1.53E-03
45	GO:0004301: epoxide hydrolase activity	1.53E-03
46	GO:0015210: uracil transmembrane transporter activity	1.53E-03
47	GO:0016887: ATPase activity	1.74E-03
48	GO:0031386: protein tag	1.95E-03
49	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	1.95E-03
50	GO:0002094: polyprenyltransferase activity	1.95E-03
51	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	1.95E-03
52	GO:0036402: proteasome-activating ATPase activity	2.40E-03
53	GO:0031593: polyubiquitin binding	2.40E-03
54	GO:0047714: galactolipase activity	2.40E-03
55	GO:0004197: cysteine-type endopeptidase activity	2.42E-03
56	GO:0102391: decanoate--CoA ligase activity	2.89E-03
57	GO:0003730: mRNA 3'-UTR binding	2.89E-03
58	GO:0004656: procollagen-proline 4-dioxygenase activity	2.89E-03
59	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	2.89E-03
60	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	2.89E-03
61	GO:0016787: hydrolase activity	3.24E-03
62	GO:0004467: long-chain fatty acid-CoA ligase activity	3.40E-03
63	GO:0008235: metalloexopeptidase activity	3.40E-03
64	GO:0004869: cysteine-type endopeptidase inhibitor activity	3.94E-03
65	GO:0052747: sinapyl alcohol dehydrogenase activity	3.94E-03
66	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	4.25E-03
67	GO:0005096: GTPase activator activity	4.46E-03
68	GO:0008142: oxysterol binding	4.51E-03
69	GO:0004630: phospholipase D activity	4.51E-03
70	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	4.51E-03
71	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	4.51E-03
72	GO:0047617: acyl-CoA hydrolase activity	5.74E-03
73	GO:0045309: protein phosphorylated amino acid binding	5.74E-03
74	GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity	6.38E-03
75	GO:0004713: protein tyrosine kinase activity	6.38E-03
76	GO:0019904: protein domain specific binding	7.06E-03
77	GO:0008794: arsenate reductase (glutaredoxin) activity	7.06E-03
78	GO:0004177: aminopeptidase activity	7.06E-03
79	GO:0035091: phosphatidylinositol binding	7.50E-03
80	GO:0045551: cinnamyl-alcohol dehydrogenase activity	7.76E-03
81	GO:0004521: endoribonuclease activity	7.76E-03
82	GO:0008081: phosphoric diester hydrolase activity	8.48E-03
83	GO:0004175: endopeptidase activity	9.23E-03
84	GO:0017025: TBP-class protein binding	1.00E-02
85	GO:0008234: cysteine-type peptidase activity	1.04E-02
86	GO:0004725: protein tyrosine phosphatase activity	1.08E-02
87	GO:0031418: L-ascorbic acid binding	1.16E-02
88	GO:0005528: FK506 binding	1.16E-02
89	GO:0004707: MAP kinase activity	1.33E-02
90	GO:0030246: carbohydrate binding	1.37E-02
91	GO:0047134: protein-disulfide reductase activity	1.70E-02
92	GO:0005525: GTP binding	1.85E-02
93	GO:0004791: thioredoxin-disulfide reductase activity	1.99E-02
94	GO:0008565: protein transporter activity	2.01E-02
95	GO:0009931: calcium-dependent protein serine/threonine kinase activity	3.09E-02
96	GO:0030247: polysaccharide binding	3.20E-02
97	GO:0004683: calmodulin-dependent protein kinase activity	3.20E-02
98	GO:0004806: triglyceride lipase activity	3.20E-02
99	GO:0000166: nucleotide binding	3.29E-02
100	GO:0046982: protein heterodimerization activity	3.51E-02
101	GO:0030145: manganese ion binding	3.82E-02
102	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.08E-02
103	GO:0004712: protein serine/threonine/tyrosine kinase activity	4.34E-02
104	GO:0003729: mRNA binding	4.50E-02
105	GO:0061630: ubiquitin protein ligase activity	4.65E-02
106	GO:0004364: glutathione transferase activity	4.74E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0005785: signal recognition particle receptor complex	0.00E+00
3	GO:0005829: cytosol	1.83E-07
4	GO:0005886: plasma membrane	4.01E-06
5	GO:0005783: endoplasmic reticulum	8.20E-06
6	GO:0030139: endocytic vesicle	8.46E-06
7	GO:0000323: lytic vacuole	1.93E-05
8	GO:0005776: autophagosome	3.53E-05
9	GO:0031305: integral component of mitochondrial inner membrane	1.94E-04
10	GO:0009514: glyoxysome	2.40E-04
11	GO:0005789: endoplasmic reticulum membrane	4.60E-04
12	GO:0005777: peroxisome	7.14E-04
13	GO:0042406: extrinsic component of endoplasmic reticulum membrane	8.05E-04
14	GO:0031902: late endosome membrane	8.52E-04
15	GO:0031461: cullin-RING ubiquitin ligase complex	1.15E-03
16	GO:0005775: vacuolar lumen	1.15E-03
17	GO:0032585: multivesicular body membrane	1.15E-03
18	GO:0031410: cytoplasmic vesicle	1.24E-03
19	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.46E-03
20	GO:0030136: clathrin-coated vesicle	1.58E-03
21	GO:0000813: ESCRT I complex	1.95E-03
22	GO:0031597: cytosolic proteasome complex	2.89E-03
23	GO:0009524: phragmoplast	3.03E-03
24	GO:0000794: condensed nuclear chromosome	3.40E-03
25	GO:0031595: nuclear proteasome complex	3.40E-03
26	GO:0005773: vacuole	3.41E-03
27	GO:0000421: autophagosome membrane	3.94E-03
28	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	4.51E-03
29	GO:0031901: early endosome membrane	5.11E-03
30	GO:0030665: clathrin-coated vesicle membrane	5.74E-03
31	GO:0008540: proteasome regulatory particle, base subcomplex	5.74E-03
32	GO:0005819: spindle	5.87E-03
33	GO:0017119: Golgi transport complex	6.38E-03
34	GO:0016602: CCAAT-binding factor complex	8.48E-03
35	GO:0005764: lysosome	9.23E-03
36	GO:0005635: nuclear envelope	1.00E-02
37	GO:0005795: Golgi stack	1.00E-02
38	GO:0005769: early endosome	1.08E-02
39	GO:0005741: mitochondrial outer membrane	1.33E-02
40	GO:0005737: cytoplasm	2.54E-02
41	GO:0005615: extracellular space	2.59E-02
42	GO:0030529: intracellular ribonucleoprotein complex	2.85E-02
43	GO:0000932: P-body	2.85E-02
44	GO:0000151: ubiquitin ligase complex	3.45E-02
45	GO:0000786: nucleosome	3.95E-02