co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G31970

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0000478: endonucleolytic cleavage involved in rRNA processing	0.00E+00
2	GO:0072321: chaperone-mediated protein transport	0.00E+00
3	GO:0000494: box C/D snoRNA 3'-end processing	0.00E+00
4	GO:0080056: petal vascular tissue pattern formation	0.00E+00
5	GO:0071731: response to nitric oxide	0.00E+00
6	GO:0080057: sepal vascular tissue pattern formation	0.00E+00
7	GO:1990258: histone glutamine methylation	0.00E+00
8	GO:0042254: ribosome biogenesis	5.36E-13
9	GO:0006412: translation	1.11E-10
10	GO:0006364: rRNA processing	3.75E-09
11	GO:0031167: rRNA methylation	1.17E-06
12	GO:0006458: 'de novo' protein folding	2.70E-06
13	GO:0046686: response to cadmium ion	3.63E-06
14	GO:0001510: RNA methylation	6.65E-06
15	GO:0010162: seed dormancy process	1.29E-05
16	GO:0000027: ribosomal large subunit assembly	3.76E-05
17	GO:0009944: polarity specification of adaxial/abaxial axis	3.76E-05
18	GO:0061077: chaperone-mediated protein folding	4.74E-05
19	GO:0007005: mitochondrion organization	5.28E-05
20	GO:0045041: protein import into mitochondrial intermembrane space	5.64E-05
21	GO:0009294: DNA mediated transformation	5.84E-05
22	GO:0008033: tRNA processing	7.73E-05
23	GO:1902626: assembly of large subunit precursor of preribosome	9.94E-05
24	GO:0045039: protein import into mitochondrial inner membrane	9.94E-05
25	GO:0006986: response to unfolded protein	1.49E-04
26	GO:0070301: cellular response to hydrogen peroxide	1.49E-04
27	GO:0051085: chaperone mediated protein folding requiring cofactor	1.49E-04
28	GO:0006241: CTP biosynthetic process	1.49E-04
29	GO:0006165: nucleoside diphosphate phosphorylation	1.49E-04
30	GO:0006228: UTP biosynthetic process	1.49E-04
31	GO:0051131: chaperone-mediated protein complex assembly	1.49E-04
32	GO:0006183: GTP biosynthetic process	2.04E-04
33	GO:0042273: ribosomal large subunit biogenesis	2.04E-04
34	GO:0042026: protein refolding	3.89E-04
35	GO:0042255: ribosome assembly	5.25E-04
36	GO:0009735: response to cytokinin	6.03E-04
37	GO:0006457: protein folding	9.25E-04
38	GO:0006626: protein targeting to mitochondrion	1.07E-03
39	GO:0010588: cotyledon vascular tissue pattern formation	1.07E-03
40	GO:0048467: gynoecium development	1.16E-03
41	GO:0009651: response to salt stress	1.42E-03
42	GO:0000413: protein peptidyl-prolyl isomerization	2.15E-03
43	GO:0010305: leaf vascular tissue pattern formation	2.26E-03
44	GO:0032502: developmental process	2.73E-03
45	GO:0009408: response to heat	3.03E-03
46	GO:0016049: cell growth	3.87E-03
47	GO:0010043: response to zinc ion	4.42E-03
48	GO:0048527: lateral root development	4.42E-03
49	GO:0010224: response to UV-B	7.05E-03
50	GO:0048367: shoot system development	7.90E-03
51	GO:0006414: translational elongation	7.95E-03
52	GO:0016569: covalent chromatin modification	8.43E-03
53	GO:0009553: embryo sac development	8.61E-03
54	GO:0006413: translational initiation	1.23E-02
55	GO:0009723: response to ethylene	1.95E-02
56	GO:0048366: leaf development	1.98E-02
57	GO:0045892: negative regulation of transcription, DNA-templated	2.36E-02
58	GO:0009793: embryo development ending in seed dormancy	2.51E-02
59	GO:0048364: root development	2.79E-02
60	GO:0009734: auxin-activated signaling pathway	3.46E-02
61	GO:0009555: pollen development	4.07E-02
62	GO:0051301: cell division	4.33E-02

Rank	GO Term	Adjusted P value
1	GO:1990259: histone-glutamine methyltransferase activity	0.00E+00
2	GO:0016018: cyclosporin A binding	0.00E+00
3	GO:0003735: structural constituent of ribosome	1.59E-14
4	GO:0008649: rRNA methyltransferase activity	1.42E-07
5	GO:0051082: unfolded protein binding	7.14E-07
6	GO:0030515: snoRNA binding	3.78E-06
7	GO:0044183: protein binding involved in protein folding	1.56E-05
8	GO:0004407: histone deacetylase activity	3.76E-05
9	GO:0003729: mRNA binding	4.70E-05
10	GO:0005507: copper ion binding	1.21E-04
11	GO:0004550: nucleoside diphosphate kinase activity	1.49E-04
12	GO:0003746: translation elongation factor activity	2.70E-04
13	GO:0003924: GTPase activity	3.26E-04
14	GO:0003723: RNA binding	1.14E-03
15	GO:0051087: chaperone binding	1.53E-03
16	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	4.00E-03
17	GO:0050897: cobalt ion binding	4.42E-03
18	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	6.23E-03
19	GO:0008565: protein transporter activity	1.17E-02
20	GO:0003743: translation initiation factor activity	1.44E-02
21	GO:0005524: ATP binding	2.56E-02
22	GO:0005515: protein binding	4.36E-02
23	GO:0003676: nucleic acid binding	4.45E-02

Rank	GO Term	Adjusted P value
1	GO:0042719: mitochondrial intermembrane space protein transporter complex	0.00E+00
2	GO:0005832: chaperonin-containing T-complex	0.00E+00
3	GO:0005730: nucleolus	3.68E-20
4	GO:0022625: cytosolic large ribosomal subunit	1.84E-14
5	GO:0005840: ribosome	9.26E-13
6	GO:0022626: cytosolic ribosome	5.51E-11
7	GO:0005774: vacuolar membrane	1.61E-07
8	GO:0031428: box C/D snoRNP complex	1.84E-06
9	GO:0015934: large ribosomal subunit	6.26E-06
10	GO:0015030: Cajal body	1.05E-05
11	GO:0032040: small-subunit processome	1.85E-05
12	GO:0005759: mitochondrial matrix	6.59E-05
13	GO:0005829: cytosol	9.62E-05
14	GO:0005773: vacuole	9.71E-05
15	GO:0005737: cytoplasm	1.27E-04
16	GO:0009506: plasmodesma	1.46E-04
17	GO:0030687: preribosome, large subunit precursor	4.56E-04
18	GO:0034399: nuclear periphery	5.25E-04
19	GO:0005747: mitochondrial respiratory chain complex I	5.67E-04
20	GO:0016020: membrane	1.05E-03
21	GO:0005739: mitochondrion	1.25E-03
22	GO:0005758: mitochondrial intermembrane space	1.43E-03
23	GO:0005618: cell wall	1.83E-03
24	GO:0016592: mediator complex	2.73E-03
25	GO:0022627: cytosolic small ribosomal subunit	1.58E-02
26	GO:0005743: mitochondrial inner membrane	2.57E-02
27	GO:0048046: apoplast	3.94E-02
28	GO:0005777: peroxisome	4.49E-02