GO Enrichment Analysis of Co-expressed Genes with
AT1G31910
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006182: cGMP biosynthetic process | 0.00E+00 |
| 2 | GO:0072722: response to amitrole | 0.00E+00 |
| 3 | GO:0002191: cap-dependent translational initiation | 0.00E+00 |
| 4 | GO:0042430: indole-containing compound metabolic process | 0.00E+00 |
| 5 | GO:0006457: protein folding | 1.42E-12 |
| 6 | GO:0034976: response to endoplasmic reticulum stress | 1.32E-11 |
| 7 | GO:0009617: response to bacterium | 6.49E-08 |
| 8 | GO:0045454: cell redox homeostasis | 6.57E-07 |
| 9 | GO:0042742: defense response to bacterium | 9.64E-06 |
| 10 | GO:0009697: salicylic acid biosynthetic process | 2.06E-05 |
| 11 | GO:0046686: response to cadmium ion | 4.24E-05 |
| 12 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 4.39E-05 |
| 13 | GO:0055114: oxidation-reduction process | 4.70E-05 |
| 14 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 7.70E-05 |
| 15 | GO:0030968: endoplasmic reticulum unfolded protein response | 9.69E-05 |
| 16 | GO:0009699: phenylpropanoid biosynthetic process | 9.69E-05 |
| 17 | GO:0050691: regulation of defense response to virus by host | 1.22E-04 |
| 18 | GO:0034975: protein folding in endoplasmic reticulum | 1.22E-04 |
| 19 | GO:0051791: medium-chain fatty acid metabolic process | 1.22E-04 |
| 20 | GO:0043687: post-translational protein modification | 1.22E-04 |
| 21 | GO:0042964: thioredoxin reduction | 1.22E-04 |
| 22 | GO:0046244: salicylic acid catabolic process | 1.22E-04 |
| 23 | GO:0009073: aromatic amino acid family biosynthetic process | 2.00E-04 |
| 24 | GO:0009682: induced systemic resistance | 2.00E-04 |
| 25 | GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine | 2.82E-04 |
| 26 | GO:0045905: positive regulation of translational termination | 2.82E-04 |
| 27 | GO:0045901: positive regulation of translational elongation | 2.82E-04 |
| 28 | GO:0006452: translational frameshifting | 2.82E-04 |
| 29 | GO:0009062: fatty acid catabolic process | 4.65E-04 |
| 30 | GO:0010272: response to silver ion | 4.65E-04 |
| 31 | GO:0055074: calcium ion homeostasis | 4.65E-04 |
| 32 | GO:0006421: asparaginyl-tRNA aminoacylation | 4.65E-04 |
| 33 | GO:0031348: negative regulation of defense response | 5.53E-04 |
| 34 | GO:0009306: protein secretion | 6.53E-04 |
| 35 | GO:0010116: positive regulation of abscisic acid biosynthetic process | 6.66E-04 |
| 36 | GO:0002239: response to oomycetes | 6.66E-04 |
| 37 | GO:0072334: UDP-galactose transmembrane transport | 6.66E-04 |
| 38 | GO:0009553: embryo sac development | 7.14E-04 |
| 39 | GO:0009751: response to salicylic acid | 9.90E-04 |
| 40 | GO:0006635: fatty acid beta-oxidation | 9.99E-04 |
| 41 | GO:0018279: protein N-linked glycosylation via asparagine | 1.12E-03 |
| 42 | GO:0045116: protein neddylation | 1.12E-03 |
| 43 | GO:0000304: response to singlet oxygen | 1.12E-03 |
| 44 | GO:0006413: translational initiation | 1.34E-03 |
| 45 | GO:0047484: regulation of response to osmotic stress | 1.37E-03 |
| 46 | GO:0001731: formation of translation preinitiation complex | 1.37E-03 |
| 47 | GO:0010256: endomembrane system organization | 1.37E-03 |
| 48 | GO:0009627: systemic acquired resistance | 1.58E-03 |
| 49 | GO:0009423: chorismate biosynthetic process | 1.64E-03 |
| 50 | GO:0042372: phylloquinone biosynthetic process | 1.64E-03 |
| 51 | GO:1902074: response to salt | 1.92E-03 |
| 52 | GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c | 1.92E-03 |
| 53 | GO:0009735: response to cytokinin | 2.10E-03 |
| 54 | GO:0006605: protein targeting | 2.22E-03 |
| 55 | GO:0006875: cellular metal ion homeostasis | 2.22E-03 |
| 56 | GO:0030091: protein repair | 2.22E-03 |
| 57 | GO:0006099: tricarboxylic acid cycle | 2.43E-03 |
| 58 | GO:0010120: camalexin biosynthetic process | 2.54E-03 |
| 59 | GO:0019430: removal of superoxide radicals | 2.54E-03 |
| 60 | GO:0006468: protein phosphorylation | 2.82E-03 |
| 61 | GO:0009060: aerobic respiration | 2.87E-03 |
| 62 | GO:0015780: nucleotide-sugar transport | 2.87E-03 |
| 63 | GO:0046685: response to arsenic-containing substance | 2.87E-03 |
| 64 | GO:0043067: regulation of programmed cell death | 3.21E-03 |
| 65 | GO:0006032: chitin catabolic process | 3.57E-03 |
| 66 | GO:0000272: polysaccharide catabolic process | 3.94E-03 |
| 67 | GO:0016485: protein processing | 3.94E-03 |
| 68 | GO:0052544: defense response by callose deposition in cell wall | 3.94E-03 |
| 69 | GO:0006790: sulfur compound metabolic process | 4.32E-03 |
| 70 | GO:0002213: defense response to insect | 4.32E-03 |
| 71 | GO:0010075: regulation of meristem growth | 4.71E-03 |
| 72 | GO:0048316: seed development | 4.90E-03 |
| 73 | GO:0006446: regulation of translational initiation | 5.12E-03 |
| 74 | GO:0009934: regulation of meristem structural organization | 5.12E-03 |
| 75 | GO:0002237: response to molecule of bacterial origin | 5.12E-03 |
| 76 | GO:0009620: response to fungus | 5.21E-03 |
| 77 | GO:0009408: response to heat | 5.44E-03 |
| 78 | GO:0046688: response to copper ion | 5.54E-03 |
| 79 | GO:0046854: phosphatidylinositol phosphorylation | 5.54E-03 |
| 80 | GO:0000162: tryptophan biosynthetic process | 5.98E-03 |
| 81 | GO:0080147: root hair cell development | 6.42E-03 |
| 82 | GO:0006825: copper ion transport | 6.87E-03 |
| 83 | GO:0016998: cell wall macromolecule catabolic process | 7.34E-03 |
| 84 | GO:0030433: ubiquitin-dependent ERAD pathway | 7.81E-03 |
| 85 | GO:0019748: secondary metabolic process | 7.81E-03 |
| 86 | GO:0007131: reciprocal meiotic recombination | 7.81E-03 |
| 87 | GO:0010227: floral organ abscission | 8.30E-03 |
| 88 | GO:0010089: xylem development | 8.80E-03 |
| 89 | GO:0000413: protein peptidyl-prolyl isomerization | 9.83E-03 |
| 90 | GO:0010118: stomatal movement | 9.83E-03 |
| 91 | GO:0010150: leaf senescence | 9.86E-03 |
| 92 | GO:0015031: protein transport | 1.01E-02 |
| 93 | GO:0010197: polar nucleus fusion | 1.04E-02 |
| 94 | GO:0048868: pollen tube development | 1.04E-02 |
| 95 | GO:0007166: cell surface receptor signaling pathway | 1.13E-02 |
| 96 | GO:0009851: auxin biosynthetic process | 1.15E-02 |
| 97 | GO:0002229: defense response to oomycetes | 1.20E-02 |
| 98 | GO:0009630: gravitropism | 1.26E-02 |
| 99 | GO:0030163: protein catabolic process | 1.32E-02 |
| 100 | GO:0006464: cellular protein modification process | 1.38E-02 |
| 101 | GO:0009567: double fertilization forming a zygote and endosperm | 1.38E-02 |
| 102 | GO:0010252: auxin homeostasis | 1.38E-02 |
| 103 | GO:0009615: response to virus | 1.56E-02 |
| 104 | GO:0006906: vesicle fusion | 1.69E-02 |
| 105 | GO:0016311: dephosphorylation | 1.82E-02 |
| 106 | GO:0016049: cell growth | 1.82E-02 |
| 107 | GO:0009817: defense response to fungus, incompatible interaction | 1.88E-02 |
| 108 | GO:0009407: toxin catabolic process | 2.02E-02 |
| 109 | GO:0044550: secondary metabolite biosynthetic process | 2.07E-02 |
| 110 | GO:0010043: response to zinc ion | 2.09E-02 |
| 111 | GO:0007568: aging | 2.09E-02 |
| 112 | GO:0045087: innate immune response | 2.23E-02 |
| 113 | GO:0006887: exocytosis | 2.52E-02 |
| 114 | GO:0006979: response to oxidative stress | 2.77E-02 |
| 115 | GO:0009636: response to toxic substance | 2.90E-02 |
| 116 | GO:0009965: leaf morphogenesis | 2.90E-02 |
| 117 | GO:0006855: drug transmembrane transport | 2.98E-02 |
| 118 | GO:0031347: regulation of defense response | 3.06E-02 |
| 119 | GO:0009846: pollen germination | 3.14E-02 |
| 120 | GO:0009809: lignin biosynthetic process | 3.30E-02 |
| 121 | GO:0006486: protein glycosylation | 3.30E-02 |
| 122 | GO:0010224: response to UV-B | 3.38E-02 |
| 123 | GO:0006417: regulation of translation | 3.55E-02 |
| 124 | GO:0050832: defense response to fungus | 3.56E-02 |
| 125 | GO:0006096: glycolytic process | 3.72E-02 |
| 126 | GO:0009651: response to salt stress | 4.24E-02 |
| 127 | GO:0009624: response to nematode | 4.24E-02 |
| 128 | GO:0018105: peptidyl-serine phosphorylation | 4.33E-02 |
| 129 | GO:0009555: pollen development | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016312: inositol bisphosphate phosphatase activity | 0.00E+00 |
| 2 | GO:0050269: coniferyl-aldehyde dehydrogenase activity | 0.00E+00 |
| 3 | GO:0046424: ferulate 5-hydroxylase activity | 0.00E+00 |
| 4 | GO:0047720: indoleacetaldoxime dehydratase activity | 0.00E+00 |
| 5 | GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity | 0.00E+00 |
| 6 | GO:0098808: mRNA cap binding | 0.00E+00 |
| 7 | GO:0003756: protein disulfide isomerase activity | 9.76E-11 |
| 8 | GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity | 7.51E-07 |
| 9 | GO:0051082: unfolded protein binding | 4.27E-06 |
| 10 | GO:0005460: UDP-glucose transmembrane transporter activity | 6.65E-06 |
| 11 | GO:0005459: UDP-galactose transmembrane transporter activity | 2.06E-05 |
| 12 | GO:0004656: procollagen-proline 4-dioxygenase activity | 4.39E-05 |
| 13 | GO:0048037: cofactor binding | 1.22E-04 |
| 14 | GO:0008909: isochorismate synthase activity | 1.22E-04 |
| 15 | GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity | 1.22E-04 |
| 16 | GO:0008809: carnitine racemase activity | 1.22E-04 |
| 17 | GO:0033984: indole-3-glycerol-phosphate lyase activity | 1.22E-04 |
| 18 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 2.30E-04 |
| 19 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 2.82E-04 |
| 20 | GO:0019781: NEDD8 activating enzyme activity | 2.82E-04 |
| 21 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 2.82E-04 |
| 22 | GO:0005509: calcium ion binding | 3.35E-04 |
| 23 | GO:0005506: iron ion binding | 3.84E-04 |
| 24 | GO:0016301: kinase activity | 3.85E-04 |
| 25 | GO:0031418: L-ascorbic acid binding | 4.18E-04 |
| 26 | GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity | 4.65E-04 |
| 27 | GO:0004816: asparagine-tRNA ligase activity | 4.65E-04 |
| 28 | GO:0004383: guanylate cyclase activity | 4.65E-04 |
| 29 | GO:0000030: mannosyltransferase activity | 4.65E-04 |
| 30 | GO:0016531: copper chaperone activity | 4.65E-04 |
| 31 | GO:0004148: dihydrolipoyl dehydrogenase activity | 4.65E-04 |
| 32 | GO:0019003: GDP binding | 4.65E-04 |
| 33 | GO:0004165: dodecenoyl-CoA delta-isomerase activity | 6.66E-04 |
| 34 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 8.31E-04 |
| 35 | GO:0004576: oligosaccharyl transferase activity | 8.84E-04 |
| 36 | GO:0004834: tryptophan synthase activity | 8.84E-04 |
| 37 | GO:0003997: acyl-CoA oxidase activity | 1.12E-03 |
| 38 | GO:0008641: small protein activating enzyme activity | 1.12E-03 |
| 39 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 1.12E-03 |
| 40 | GO:0004029: aldehyde dehydrogenase (NAD) activity | 1.37E-03 |
| 41 | GO:0008113: peptide-methionine (S)-S-oxide reductase activity | 1.64E-03 |
| 42 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 1.64E-03 |
| 43 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.64E-03 |
| 44 | GO:0030247: polysaccharide binding | 1.67E-03 |
| 45 | GO:0003743: translation initiation factor activity | 1.77E-03 |
| 46 | GO:0043022: ribosome binding | 2.22E-03 |
| 47 | GO:0003746: translation elongation factor activity | 2.33E-03 |
| 48 | GO:0000166: nucleotide binding | 2.40E-03 |
| 49 | GO:0008135: translation factor activity, RNA binding | 2.54E-03 |
| 50 | GO:0004674: protein serine/threonine kinase activity | 3.03E-03 |
| 51 | GO:0030955: potassium ion binding | 3.21E-03 |
| 52 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 3.21E-03 |
| 53 | GO:0004743: pyruvate kinase activity | 3.21E-03 |
| 54 | GO:0004568: chitinase activity | 3.57E-03 |
| 55 | GO:0008559: xenobiotic-transporting ATPase activity | 3.94E-03 |
| 56 | GO:0004022: alcohol dehydrogenase (NAD) activity | 4.71E-03 |
| 57 | GO:0031072: heat shock protein binding | 4.71E-03 |
| 58 | GO:0008061: chitin binding | 5.54E-03 |
| 59 | GO:0015035: protein disulfide oxidoreductase activity | 5.87E-03 |
| 60 | GO:0005524: ATP binding | 6.25E-03 |
| 61 | GO:0004298: threonine-type endopeptidase activity | 7.34E-03 |
| 62 | GO:0004791: thioredoxin-disulfide reductase activity | 1.09E-02 |
| 63 | GO:0016853: isomerase activity | 1.09E-02 |
| 64 | GO:0010181: FMN binding | 1.09E-02 |
| 65 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.32E-02 |
| 66 | GO:0020037: heme binding | 1.40E-02 |
| 67 | GO:0051213: dioxygenase activity | 1.56E-02 |
| 68 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 1.69E-02 |
| 69 | GO:0004683: calmodulin-dependent protein kinase activity | 1.75E-02 |
| 70 | GO:0005507: copper ion binding | 1.77E-02 |
| 71 | GO:0019825: oxygen binding | 1.77E-02 |
| 72 | GO:0050660: flavin adenine dinucleotide binding | 1.77E-02 |
| 73 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 1.82E-02 |
| 74 | GO:0008233: peptidase activity | 1.87E-02 |
| 75 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.88E-02 |
| 76 | GO:0004497: monooxygenase activity | 1.90E-02 |
| 77 | GO:0015238: drug transmembrane transporter activity | 1.95E-02 |
| 78 | GO:0004222: metalloendopeptidase activity | 2.02E-02 |
| 79 | GO:0050897: cobalt ion binding | 2.09E-02 |
| 80 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 2.09E-02 |
| 81 | GO:0000149: SNARE binding | 2.37E-02 |
| 82 | GO:0004364: glutathione transferase activity | 2.59E-02 |
| 83 | GO:0005484: SNAP receptor activity | 2.67E-02 |
| 84 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.98E-02 |
| 85 | GO:0016491: oxidoreductase activity | 3.86E-02 |
| 86 | GO:0016746: transferase activity, transferring acyl groups | 4.33E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000327: lytic vacuole within protein storage vacuole | 0.00E+00 |
| 2 | GO:0005783: endoplasmic reticulum | 1.80E-17 |
| 3 | GO:0005788: endoplasmic reticulum lumen | 3.38E-15 |
| 4 | GO:0005774: vacuolar membrane | 1.88E-05 |
| 5 | GO:0045252: oxoglutarate dehydrogenase complex | 1.22E-04 |
| 6 | GO:0005829: cytosol | 1.33E-04 |
| 7 | GO:0005886: plasma membrane | 2.59E-04 |
| 8 | GO:0030176: integral component of endoplasmic reticulum membrane | 3.37E-04 |
| 9 | GO:0005758: mitochondrial intermembrane space | 4.18E-04 |
| 10 | GO:0016020: membrane | 5.57E-04 |
| 11 | GO:0009507: chloroplast | 7.96E-04 |
| 12 | GO:0005789: endoplasmic reticulum membrane | 9.29E-04 |
| 13 | GO:0016592: mediator complex | 1.06E-03 |
| 14 | GO:0008250: oligosaccharyltransferase complex | 1.12E-03 |
| 15 | GO:0005759: mitochondrial matrix | 1.30E-03 |
| 16 | GO:0016282: eukaryotic 43S preinitiation complex | 1.37E-03 |
| 17 | GO:0033290: eukaryotic 48S preinitiation complex | 1.64E-03 |
| 18 | GO:0030173: integral component of Golgi membrane | 1.64E-03 |
| 19 | GO:0009505: plant-type cell wall | 2.53E-03 |
| 20 | GO:0000326: protein storage vacuole | 2.54E-03 |
| 21 | GO:0019773: proteasome core complex, alpha-subunit complex | 2.54E-03 |
| 22 | GO:0005834: heterotrimeric G-protein complex | 5.05E-03 |
| 23 | GO:0005750: mitochondrial respiratory chain complex III | 5.12E-03 |
| 24 | GO:0005741: mitochondrial outer membrane | 7.34E-03 |
| 25 | GO:0005839: proteasome core complex | 7.34E-03 |
| 26 | GO:0048046: apoplast | 1.61E-02 |
| 27 | GO:0000325: plant-type vacuole | 2.09E-02 |
| 28 | GO:0016021: integral component of membrane | 2.52E-02 |
| 29 | GO:0031201: SNARE complex | 2.52E-02 |
| 30 | GO:0005773: vacuole | 3.05E-02 |
| 31 | GO:0000502: proteasome complex | 3.30E-02 |
| 32 | GO:0009536: plastid | 3.54E-02 |
| 33 | GO:0005747: mitochondrial respiratory chain complex I | 3.80E-02 |
| 34 | GO:0005794: Golgi apparatus | 4.55E-02 |