co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G31800

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0097164: ammonium ion metabolic process	0.00E+00
2	GO:0032544: plastid translation	7.76E-06
3	GO:0006438: valyl-tRNA aminoacylation	2.41E-05
4	GO:0070981: L-asparagine biosynthetic process	6.16E-05
5	GO:0006529: asparagine biosynthetic process	6.16E-05
6	GO:0006568: tryptophan metabolic process	6.16E-05
7	GO:0015714: phosphoenolpyruvate transport	1.09E-04
8	GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis	1.62E-04
9	GO:0006021: inositol biosynthetic process	2.21E-04
10	GO:0015713: phosphoglycerate transport	2.21E-04
11	GO:0046855: inositol phosphate dephosphorylation	3.51E-04
12	GO:0009854: oxidative photosynthetic carbon pathway	4.20E-04
13	GO:0009955: adaxial/abaxial pattern specification	4.20E-04
14	GO:1901259: chloroplast rRNA processing	4.20E-04
15	GO:0006605: protein targeting	5.68E-04
16	GO:0008610: lipid biosynthetic process	5.68E-04
17	GO:0006790: sulfur compound metabolic process	1.07E-03
18	GO:0006541: glutamine metabolic process	1.25E-03
19	GO:0019853: L-ascorbic acid biosynthetic process	1.35E-03
20	GO:0046854: phosphatidylinositol phosphorylation	1.35E-03
21	GO:0006487: protein N-linked glycosylation	1.55E-03
22	GO:0006418: tRNA aminoacylation for protein translation	1.65E-03
23	GO:0009306: protein secretion	2.10E-03
24	GO:0009646: response to absence of light	2.57E-03
25	GO:1901657: glycosyl compound metabolic process	3.08E-03
26	GO:0006412: translation	3.34E-03
27	GO:0010027: thylakoid membrane organization	3.63E-03
28	GO:0000160: phosphorelay signal transduction system	4.49E-03
29	GO:0009853: photorespiration	5.11E-03
30	GO:0008643: carbohydrate transport	6.42E-03
31	GO:0042538: hyperosmotic salinity response	7.11E-03
32	GO:0009736: cytokinin-activated signaling pathway	7.47E-03
33	GO:0042744: hydrogen peroxide catabolic process	1.23E-02
34	GO:0016036: cellular response to phosphate starvation	1.34E-02
35	GO:0006413: translational initiation	1.34E-02
36	GO:0008380: RNA splicing	1.59E-02
37	GO:0009409: response to cold	1.65E-02
38	GO:0009658: chloroplast organization	1.92E-02
39	GO:0080167: response to karrikin	2.23E-02
40	GO:0015979: photosynthesis	2.45E-02
41	GO:0032259: methylation	2.86E-02
42	GO:0016310: phosphorylation	3.00E-02
43	GO:0006397: mRNA processing	3.04E-02
44	GO:0009735: response to cytokinin	4.16E-02

Rank	GO Term	Adjusted P value
1	GO:0008887: glycerate kinase activity	0.00E+00
2	GO:0004832: valine-tRNA ligase activity	2.41E-05
3	GO:0010347: L-galactose-1-phosphate phosphatase activity	2.41E-05
4	GO:0030794: (S)-coclaurine-N-methyltransferase activity	2.41E-05
5	GO:0004425: indole-3-glycerol-phosphate synthase activity	2.41E-05
6	GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	2.41E-05
7	GO:0015121: phosphoenolpyruvate:phosphate antiporter activity	2.41E-05
8	GO:0004071: aspartate-ammonia ligase activity	2.41E-05
9	GO:0008825: cyclopropane-fatty-acyl-phospholipid synthase activity	6.16E-05
10	GO:0052832: inositol monophosphate 3-phosphatase activity	6.16E-05
11	GO:0008934: inositol monophosphate 1-phosphatase activity	6.16E-05
12	GO:0052833: inositol monophosphate 4-phosphatase activity	6.16E-05
13	GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity	6.16E-05
14	GO:0004148: dihydrolipoyl dehydrogenase activity	1.09E-04
15	GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity	1.62E-04
16	GO:0015120: phosphoglycerate transmembrane transporter activity	2.21E-04
17	GO:0004045: aminoacyl-tRNA hydrolase activity	2.21E-04
18	GO:0016773: phosphotransferase activity, alcohol group as acceptor	2.84E-04
19	GO:0004040: amidase activity	2.84E-04
20	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	4.20E-04
21	GO:0051119: sugar transmembrane transporter activity	1.35E-03
22	GO:0004812: aminoacyl-tRNA ligase activity	2.21E-03
23	GO:0000156: phosphorelay response regulator activity	3.08E-03
24	GO:0008375: acetylglucosaminyltransferase activity	3.90E-03
25	GO:0102483: scopolin beta-glucosidase activity	4.05E-03
26	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	4.34E-03
27	GO:0003993: acid phosphatase activity	5.26E-03
28	GO:0008422: beta-glucosidase activity	5.42E-03
29	GO:0019843: rRNA binding	1.12E-02
30	GO:0015297: antiporter activity	1.36E-02
31	GO:0003743: translation initiation factor activity	1.57E-02
32	GO:0016491: oxidoreductase activity	1.61E-02
33	GO:0008168: methyltransferase activity	1.86E-02
34	GO:0004601: peroxidase activity	1.92E-02
35	GO:0003735: structural constituent of ribosome	2.44E-02
36	GO:0042803: protein homodimerization activity	2.62E-02
37	GO:0004722: protein serine/threonine phosphatase activity	2.71E-02
38	GO:0009055: electron carrier activity	3.10E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	5.29E-08
2	GO:0009570: chloroplast stroma	2.22E-07
3	GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex	2.41E-05
4	GO:0005763: mitochondrial small ribosomal subunit	7.25E-04
5	GO:0046658: anchored component of plasma membrane	1.62E-03
6	GO:0005840: ribosome	1.99E-03
7	GO:0009505: plant-type cell wall	2.49E-03
8	GO:0009941: chloroplast envelope	2.86E-03
9	GO:0030529: intracellular ribonucleoprotein complex	3.63E-03
10	GO:0015934: large ribosomal subunit	4.80E-03
11	GO:0009535: chloroplast thylakoid membrane	5.19E-03
12	GO:0009579: thylakoid	7.19E-03
13	GO:0009534: chloroplast thylakoid	7.26E-03
14	GO:0031225: anchored component of membrane	9.38E-03
15	GO:0005622: intracellular	1.07E-02
16	GO:0031969: chloroplast membrane	2.23E-02
17	GO:0005887: integral component of plasma membrane	3.66E-02
18	GO:0048046: apoplast	4.44E-02