co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G31420

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0045176: apical protein localization	0.00E+00
2	GO:0045014: negative regulation of transcription by glucose	0.00E+00
3	GO:0006780: uroporphyrinogen III biosynthetic process	0.00E+00
4	GO:0010115: regulation of abscisic acid biosynthetic process	1.45E-06
5	GO:0048443: stamen development	6.84E-05
6	GO:0008610: lipid biosynthetic process	1.32E-04
7	GO:0006824: cobalt ion transport	1.73E-04
8	GO:0070509: calcium ion import	1.73E-04
9	GO:0007263: nitric oxide mediated signal transduction	1.73E-04
10	GO:0043266: regulation of potassium ion transport	1.73E-04
11	GO:0010480: microsporocyte differentiation	1.73E-04
12	GO:0006723: cuticle hydrocarbon biosynthetic process	1.73E-04
13	GO:0042547: cell wall modification involved in multidimensional cell growth	1.73E-04
14	GO:0080051: cutin transport	1.73E-04
15	GO:2000021: regulation of ion homeostasis	1.73E-04
16	GO:0034628: 'de novo' NAD biosynthetic process from aspartate	1.73E-04
17	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.20E-04
18	GO:0010152: pollen maturation	3.80E-04
19	GO:0015908: fatty acid transport	3.92E-04
20	GO:0034755: iron ion transmembrane transport	3.92E-04
21	GO:0045717: negative regulation of fatty acid biosynthetic process	3.92E-04
22	GO:0010541: acropetal auxin transport	3.92E-04
23	GO:0010289: homogalacturonan biosynthetic process	3.92E-04
24	GO:0006695: cholesterol biosynthetic process	3.92E-04
25	GO:0010540: basipetal auxin transport	4.87E-04
26	GO:0006833: water transport	6.07E-04
27	GO:0010160: formation of animal organ boundary	6.40E-04
28	GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	6.40E-04
29	GO:0051176: positive regulation of sulfur metabolic process	6.40E-04
30	GO:1902448: positive regulation of shade avoidance	6.40E-04
31	GO:0043447: alkane biosynthetic process	6.40E-04
32	GO:0051639: actin filament network formation	9.13E-04
33	GO:0034059: response to anoxia	9.13E-04
34	GO:0043481: anthocyanin accumulation in tissues in response to UV light	9.13E-04
35	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.12E-03
36	GO:0009416: response to light stimulus	1.18E-03
37	GO:1901601: strigolactone biosynthetic process	1.21E-03
38	GO:0000919: cell plate assembly	1.21E-03
39	GO:0042335: cuticle development	1.21E-03
40	GO:0000271: polysaccharide biosynthetic process	1.21E-03
41	GO:0034220: ion transmembrane transport	1.21E-03
42	GO:0010222: stem vascular tissue pattern formation	1.21E-03
43	GO:0051764: actin crosslink formation	1.21E-03
44	GO:0006085: acetyl-CoA biosynthetic process	1.21E-03
45	GO:0010182: sugar mediated signaling pathway	1.30E-03
46	GO:0045038: protein import into chloroplast thylakoid membrane	1.54E-03
47	GO:0009435: NAD biosynthetic process	1.54E-03
48	GO:0071554: cell wall organization or biogenesis	1.60E-03
49	GO:0009913: epidermal cell differentiation	1.89E-03
50	GO:0018258: protein O-linked glycosylation via hydroxyproline	1.89E-03
51	GO:0060918: auxin transport	1.89E-03
52	GO:0006796: phosphate-containing compound metabolic process	1.89E-03
53	GO:0006561: proline biosynthetic process	1.89E-03
54	GO:0010405: arabinogalactan protein metabolic process	1.89E-03
55	GO:0006751: glutathione catabolic process	1.89E-03
56	GO:0048827: phyllome development	1.89E-03
57	GO:2000033: regulation of seed dormancy process	2.27E-03
58	GO:0006694: steroid biosynthetic process	2.27E-03
59	GO:0071669: plant-type cell wall organization or biogenesis	2.67E-03
60	GO:0051510: regulation of unidimensional cell growth	2.67E-03
61	GO:0048437: floral organ development	2.67E-03
62	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	2.67E-03
63	GO:0015995: chlorophyll biosynthetic process	2.70E-03
64	GO:0006526: arginine biosynthetic process	3.54E-03
65	GO:0009808: lignin metabolic process	3.54E-03
66	GO:0016051: carbohydrate biosynthetic process	3.78E-03
67	GO:0009414: response to water deprivation	3.90E-03
68	GO:0033384: geranyl diphosphate biosynthetic process	4.00E-03
69	GO:0048589: developmental growth	4.00E-03
70	GO:0009060: aerobic respiration	4.00E-03
71	GO:0045337: farnesyl diphosphate biosynthetic process	4.00E-03
72	GO:0071555: cell wall organization	4.06E-03
73	GO:0031146: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	4.49E-03
74	GO:0006779: porphyrin-containing compound biosynthetic process	4.49E-03
75	GO:0009086: methionine biosynthetic process	4.49E-03
76	GO:0006782: protoporphyrinogen IX biosynthetic process	4.99E-03
77	GO:0009688: abscisic acid biosynthetic process	4.99E-03
78	GO:0010162: seed dormancy process	4.99E-03
79	GO:0042546: cell wall biogenesis	5.06E-03
80	GO:0006970: response to osmotic stress	5.19E-03
81	GO:0009750: response to fructose	5.52E-03
82	GO:0048229: gametophyte development	5.52E-03
83	GO:0000038: very long-chain fatty acid metabolic process	5.52E-03
84	GO:0008361: regulation of cell size	6.06E-03
85	GO:0012501: programmed cell death	6.06E-03
86	GO:0006820: anion transport	6.06E-03
87	GO:0010102: lateral root morphogenesis	6.61E-03
88	GO:0030048: actin filament-based movement	6.61E-03
89	GO:0010229: inflorescence development	6.61E-03
90	GO:0009718: anthocyanin-containing compound biosynthetic process	6.61E-03
91	GO:0010075: regulation of meristem growth	6.61E-03
92	GO:0010588: cotyledon vascular tissue pattern formation	6.61E-03
93	GO:0046777: protein autophosphorylation	6.76E-03
94	GO:0006857: oligopeptide transport	7.01E-03
95	GO:0010223: secondary shoot formation	7.20E-03
96	GO:0009934: regulation of meristem structural organization	7.20E-03
97	GO:0048768: root hair cell tip growth	7.20E-03
98	GO:0010143: cutin biosynthetic process	7.20E-03
99	GO:0010030: positive regulation of seed germination	7.79E-03
100	GO:0010025: wax biosynthetic process	8.41E-03
101	GO:0051017: actin filament bundle assembly	9.03E-03
102	GO:0006468: protein phosphorylation	9.19E-03
103	GO:0007017: microtubule-based process	9.69E-03
104	GO:0009742: brassinosteroid mediated signaling pathway	9.89E-03
105	GO:0006629: lipid metabolic process	1.02E-02
106	GO:0035428: hexose transmembrane transport	1.10E-02
107	GO:0009814: defense response, incompatible interaction	1.10E-02
108	GO:0016226: iron-sulfur cluster assembly	1.10E-02
109	GO:0009306: protein secretion	1.24E-02
110	GO:0042391: regulation of membrane potential	1.39E-02
111	GO:0000413: protein peptidyl-prolyl isomerization	1.39E-02
112	GO:0048653: anther development	1.39E-02
113	GO:0042631: cellular response to water deprivation	1.39E-02
114	GO:0007165: signal transduction	1.46E-02
115	GO:0009958: positive gravitropism	1.47E-02
116	GO:0006520: cellular amino acid metabolic process	1.47E-02
117	GO:0046323: glucose import	1.47E-02
118	GO:0009741: response to brassinosteroid	1.47E-02
119	GO:0006633: fatty acid biosynthetic process	1.47E-02
120	GO:0045489: pectin biosynthetic process	1.47E-02
121	GO:0048825: cotyledon development	1.62E-02
122	GO:0009791: post-embryonic development	1.62E-02
123	GO:0016132: brassinosteroid biosynthetic process	1.70E-02
124	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.70E-02
125	GO:0009733: response to auxin	1.76E-02
126	GO:0010583: response to cyclopentenone	1.78E-02
127	GO:0048235: pollen sperm cell differentiation	1.78E-02
128	GO:0007166: cell surface receptor signaling pathway	1.85E-02
129	GO:0030163: protein catabolic process	1.87E-02
130	GO:0009639: response to red or far red light	1.95E-02
131	GO:0009911: positive regulation of flower development	2.21E-02
132	GO:0010027: thylakoid membrane organization	2.21E-02
133	GO:0016126: sterol biosynthetic process	2.21E-02
134	GO:0042128: nitrate assimilation	2.39E-02
135	GO:0009826: unidimensional cell growth	2.41E-02
136	GO:0010411: xyloglucan metabolic process	2.48E-02
137	GO:0030244: cellulose biosynthetic process	2.67E-02
138	GO:0005975: carbohydrate metabolic process	2.75E-02
139	GO:0010311: lateral root formation	2.77E-02
140	GO:0009832: plant-type cell wall biogenesis	2.77E-02
141	GO:0010218: response to far red light	2.87E-02
142	GO:0009834: plant-type secondary cell wall biogenesis	2.87E-02
143	GO:0048527: lateral root development	2.96E-02
144	GO:0080167: response to karrikin	3.11E-02
145	GO:0009637: response to blue light	3.16E-02
146	GO:0030001: metal ion transport	3.47E-02
147	GO:0009640: photomorphogenesis	3.79E-02
148	GO:0009926: auxin polar transport	3.79E-02
149	GO:0051707: response to other organism	3.79E-02
150	GO:0042538: hyperosmotic salinity response	4.45E-02

Rank	GO Term	Adjusted P value
1	GO:0038198: auxin receptor activity	0.00E+00
2	GO:0004852: uroporphyrinogen-III synthase activity	0.00E+00
3	GO:1990534: thermospermine oxidase activity	0.00E+00
4	GO:0005048: signal sequence binding	0.00E+00
5	GO:0050614: delta24-sterol reductase activity	0.00E+00
6	GO:0005222: intracellular cAMP activated cation channel activity	0.00E+00
7	GO:0047513: 1,2-alpha-L-fucosidase activity	0.00E+00
8	GO:0008987: quinolinate synthetase A activity	0.00E+00
9	GO:0010301: xanthoxin dehydrogenase activity	0.00E+00
10	GO:0010011: auxin binding	2.30E-05
11	GO:0047150: betaine-homocysteine S-methyltransferase activity	1.73E-04
12	GO:0015245: fatty acid transporter activity	1.73E-04
13	GO:0005221: intracellular cyclic nucleotide activated cation channel activity	1.73E-04
14	GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity	1.73E-04
15	GO:0046912: transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	1.73E-04
16	GO:0015929: hexosaminidase activity	3.92E-04
17	GO:0004563: beta-N-acetylhexosaminidase activity	3.92E-04
18	GO:0000822: inositol hexakisphosphate binding	3.92E-04
19	GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	3.92E-04
20	GO:0003839: gamma-glutamylcyclotransferase activity	3.92E-04
21	GO:0008898: S-adenosylmethionine-homocysteine S-methyltransferase activity	3.92E-04
22	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	6.40E-04
23	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	8.83E-04
24	GO:0001872: (1->3)-beta-D-glucan binding	9.13E-04
25	GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity	9.13E-04
26	GO:0003878: ATP citrate synthase activity	9.13E-04
27	GO:0004674: protein serine/threonine kinase activity	1.10E-03
28	GO:0004506: squalene monooxygenase activity	1.21E-03
29	GO:0046527: glucosyltransferase activity	1.21E-03
30	GO:0008526: phosphatidylinositol transporter activity	1.21E-03
31	GO:0016836: hydro-lyase activity	1.21E-03
32	GO:0008381: mechanically-gated ion channel activity	1.54E-03
33	GO:0035673: oligopeptide transmembrane transporter activity	1.89E-03
34	GO:0042578: phosphoric ester hydrolase activity	1.89E-03
35	GO:1990714: hydroxyproline O-galactosyltransferase activity	1.89E-03
36	GO:0016829: lyase activity	1.99E-03
37	GO:0016413: O-acetyltransferase activity	2.17E-03
38	GO:0005261: cation channel activity	2.27E-03
39	GO:0051753: mannan synthase activity	2.27E-03
40	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	2.27E-03
41	GO:0005242: inward rectifier potassium channel activity	2.27E-03
42	GO:0015631: tubulin binding	2.27E-03
43	GO:0015250: water channel activity	2.30E-03
44	GO:0004427: inorganic diphosphatase activity	2.67E-03
45	GO:0004033: aldo-keto reductase (NADP) activity	3.09E-03
46	GO:0008312: 7S RNA binding	3.09E-03
47	GO:0004337: geranyltranstransferase activity	4.00E-03
48	GO:0005381: iron ion transmembrane transporter activity	4.49E-03
49	GO:0008047: enzyme activator activity	4.99E-03
50	GO:0004161: dimethylallyltranstransferase activity	5.52E-03
51	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	5.67E-03
52	GO:0015198: oligopeptide transporter activity	6.06E-03
53	GO:0016491: oxidoreductase activity	6.57E-03
54	GO:0010329: auxin efflux transmembrane transporter activity	6.61E-03
55	GO:0004022: alcohol dehydrogenase (NAD) activity	6.61E-03
56	GO:0005262: calcium channel activity	6.61E-03
57	GO:0004565: beta-galactosidase activity	6.61E-03
58	GO:0008131: primary amine oxidase activity	7.20E-03
59	GO:0003774: motor activity	7.20E-03
60	GO:0004190: aspartic-type endopeptidase activity	7.79E-03
61	GO:0030552: cAMP binding	7.79E-03
62	GO:0030553: cGMP binding	7.79E-03
63	GO:0004672: protein kinase activity	7.95E-03
64	GO:0004871: signal transducer activity	8.28E-03
65	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	8.41E-03
66	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	8.41E-03
67	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	8.41E-03
68	GO:0005528: FK506 binding	9.03E-03
69	GO:0005516: calmodulin binding	9.46E-03
70	GO:0005216: ion channel activity	9.69E-03
71	GO:0033612: receptor serine/threonine kinase binding	1.03E-02
72	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.03E-02
73	GO:0004707: MAP kinase activity	1.03E-02
74	GO:0016758: transferase activity, transferring hexosyl groups	1.14E-02
75	GO:0030570: pectate lyase activity	1.17E-02
76	GO:0016760: cellulose synthase (UDP-forming) activity	1.17E-02
77	GO:0030551: cyclic nucleotide binding	1.39E-02
78	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.51E-02
79	GO:0005355: glucose transmembrane transporter activity	1.54E-02
80	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.70E-02
81	GO:0005215: transporter activity	1.72E-02
82	GO:0051015: actin filament binding	1.87E-02
83	GO:0005200: structural constituent of cytoskeleton	2.04E-02
84	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	2.06E-02
85	GO:0016301: kinase activity	2.40E-02
86	GO:0030247: polysaccharide binding	2.48E-02
87	GO:0016798: hydrolase activity, acting on glycosyl bonds	2.48E-02
88	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.67E-02
89	GO:0005096: GTPase activator activity	2.77E-02
90	GO:0050660: flavin adenine dinucleotide binding	2.90E-02
91	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.96E-02
92	GO:0052689: carboxylic ester hydrolase activity	3.43E-02
93	GO:0005524: ATP binding	3.45E-02
94	GO:0051539: 4 iron, 4 sulfur cluster binding	3.47E-02
95	GO:0042803: protein homodimerization activity	3.89E-02
96	GO:0035091: phosphatidylinositol binding	4.01E-02
97	GO:0015293: symporter activity	4.12E-02
98	GO:0051287: NAD binding	4.34E-02
99	GO:0016787: hydrolase activity	4.54E-02
100	GO:0003924: GTPase activity	4.57E-02
101	GO:0016298: lipase activity	4.80E-02

Rank	GO Term	Adjusted P value
1	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
2	GO:0005886: plasma membrane	6.47E-12
3	GO:0016021: integral component of membrane	3.79E-04
4	GO:0080085: signal recognition particle, chloroplast targeting	3.92E-04
5	GO:0009505: plant-type cell wall	4.52E-04
6	GO:0009897: external side of plasma membrane	6.40E-04
7	GO:0046658: anchored component of plasma membrane	6.76E-04
8	GO:0009346: citrate lyase complex	9.13E-04
9	GO:0032432: actin filament bundle	9.13E-04
10	GO:0000139: Golgi membrane	1.95E-03
11	GO:0009506: plasmodesma	2.32E-03
12	GO:0005794: Golgi apparatus	2.36E-03
13	GO:0031225: anchored component of membrane	2.57E-03
14	GO:0005887: integral component of plasma membrane	3.39E-03
15	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	3.54E-03
16	GO:0045298: tubulin complex	4.00E-03
17	GO:0031977: thylakoid lumen	4.49E-03
18	GO:0016459: myosin complex	4.99E-03
19	GO:0005884: actin filament	5.52E-03
20	GO:0030659: cytoplasmic vesicle membrane	7.20E-03
21	GO:0009543: chloroplast thylakoid lumen	1.17E-02
22	GO:0005770: late endosome	1.47E-02
23	GO:0005618: cell wall	1.59E-02
24	GO:0005576: extracellular region	2.51E-02
25	GO:0009534: chloroplast thylakoid	2.67E-02
26	GO:0000151: ubiquitin ligase complex	2.67E-02
27	GO:0019005: SCF ubiquitin ligase complex	2.67E-02
28	GO:0016020: membrane	3.01E-02
29	GO:0009570: chloroplast stroma	4.07E-02
30	GO:0005768: endosome	4.43E-02