Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G26210

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate0.00E+00
2GO:0006223: uracil salvage0.00E+00
3GO:2000042: negative regulation of double-strand break repair via homologous recombination0.00E+00
4GO:0060416: response to growth hormone0.00E+00
5GO:0042821: pyridoxal biosynthetic process0.00E+00
6GO:0070272: proton-transporting ATP synthase complex biogenesis0.00E+00
7GO:0042820: vitamin B6 catabolic process0.00E+00
8GO:0006399: tRNA metabolic process0.00E+00
9GO:0006429: leucyl-tRNA aminoacylation0.00E+00
10GO:0032544: plastid translation1.18E-09
11GO:0006412: translation3.28E-08
12GO:0042254: ribosome biogenesis9.22E-08
13GO:0010027: thylakoid membrane organization1.01E-07
14GO:0006183: GTP biosynthetic process6.01E-05
15GO:0042372: phylloquinone biosynthetic process1.88E-04
16GO:1901259: chloroplast rRNA processing1.88E-04
17GO:0010444: guard mother cell differentiation2.45E-04
18GO:0009443: pyridoxal 5'-phosphate salvage3.04E-04
19GO:1903409: reactive oxygen species biosynthetic process3.04E-04
20GO:1904966: positive regulation of vitamin E biosynthetic process3.04E-04
21GO:1904964: positive regulation of phytol biosynthetic process3.04E-04
22GO:0042371: vitamin K biosynthetic process3.04E-04
23GO:0043007: maintenance of rDNA3.04E-04
24GO:0034337: RNA folding3.04E-04
25GO:0071588: hydrogen peroxide mediated signaling pathway3.04E-04
26GO:0010583: response to cyclopentenone4.35E-04
27GO:0009658: chloroplast organization6.24E-04
28GO:0010198: synergid death6.66E-04
29GO:0010115: regulation of abscisic acid biosynthetic process6.66E-04
30GO:1902326: positive regulation of chlorophyll biosynthetic process6.66E-04
31GO:0045717: negative regulation of fatty acid biosynthetic process6.66E-04
32GO:0080148: negative regulation of response to water deprivation6.66E-04
33GO:2000123: positive regulation of stomatal complex development6.66E-04
34GO:0009773: photosynthetic electron transport in photosystem I7.28E-04
35GO:0015995: chlorophyll biosynthetic process7.89E-04
36GO:0010207: photosystem II assembly1.06E-03
37GO:0090391: granum assembly1.08E-03
38GO:0006518: peptide metabolic process1.08E-03
39GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition1.08E-03
40GO:0015979: photosynthesis1.15E-03
41GO:0006633: fatty acid biosynthetic process1.30E-03
42GO:0019344: cysteine biosynthetic process1.45E-03
43GO:0006241: CTP biosynthetic process1.55E-03
44GO:0010731: protein glutathionylation1.55E-03
45GO:0006165: nucleoside diphosphate phosphorylation1.55E-03
46GO:0046739: transport of virus in multicellular host1.55E-03
47GO:0006228: UTP biosynthetic process1.55E-03
48GO:0050482: arachidonic acid secretion1.55E-03
49GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis1.55E-03
50GO:2001141: regulation of RNA biosynthetic process1.55E-03
51GO:2000038: regulation of stomatal complex development2.07E-03
52GO:0006021: inositol biosynthetic process2.07E-03
53GO:0044206: UMP salvage2.07E-03
54GO:0006749: glutathione metabolic process2.07E-03
55GO:0015976: carbon utilization2.07E-03
56GO:0009306: protein secretion2.28E-03
57GO:0010375: stomatal complex patterning2.65E-03
58GO:0009247: glycolipid biosynthetic process2.65E-03
59GO:0032543: mitochondrial translation2.65E-03
60GO:0043097: pyrimidine nucleoside salvage2.65E-03
61GO:0010236: plastoquinone biosynthetic process2.65E-03
62GO:0045038: protein import into chloroplast thylakoid membrane2.65E-03
63GO:0042335: cuticle development2.67E-03
64GO:0000413: protein peptidyl-prolyl isomerization2.67E-03
65GO:0006655: phosphatidylglycerol biosynthetic process3.27E-03
66GO:0010190: cytochrome b6f complex assembly3.27E-03
67GO:0006206: pyrimidine nucleobase metabolic process3.27E-03
68GO:0046855: inositol phosphate dephosphorylation3.27E-03
69GO:0006561: proline biosynthetic process3.27E-03
70GO:0009955: adaxial/abaxial pattern specification3.93E-03
71GO:0006694: steroid biosynthetic process3.93E-03
72GO:0009554: megasporogenesis3.93E-03
73GO:0009854: oxidative photosynthetic carbon pathway3.93E-03
74GO:0010019: chloroplast-nucleus signaling pathway3.93E-03
75GO:0010555: response to mannitol3.93E-03
76GO:0009735: response to cytokinin4.22E-03
77GO:0007267: cell-cell signaling4.56E-03
78GO:0009772: photosynthetic electron transport in photosystem II4.64E-03
79GO:0006614: SRP-dependent cotranslational protein targeting to membrane4.64E-03
80GO:0010196: nonphotochemical quenching4.64E-03
81GO:0006400: tRNA modification4.64E-03
82GO:0009395: phospholipid catabolic process4.64E-03
83GO:0009642: response to light intensity5.39E-03
84GO:0006605: protein targeting5.39E-03
85GO:0019375: galactolipid biosynthetic process5.39E-03
86GO:0010078: maintenance of root meristem identity5.39E-03
87GO:0009704: de-etiolation5.39E-03
88GO:0006644: phospholipid metabolic process5.39E-03
89GO:0010411: xyloglucan metabolic process6.04E-03
90GO:0071482: cellular response to light stimulus6.18E-03
91GO:0010497: plasmodesmata-mediated intercellular transport6.18E-03
92GO:0043562: cellular response to nitrogen levels6.18E-03
93GO:0017004: cytochrome complex assembly6.18E-03
94GO:0009808: lignin metabolic process6.18E-03
95GO:0009932: cell tip growth6.18E-03
96GO:0010206: photosystem II repair7.01E-03
97GO:0006783: heme biosynthetic process7.01E-03
98GO:0006754: ATP biosynthetic process7.01E-03
99GO:0048589: developmental growth7.01E-03
100GO:0009407: toxin catabolic process7.38E-03
101GO:0048527: lateral root development7.74E-03
102GO:0006782: protoporphyrinogen IX biosynthetic process8.77E-03
103GO:0009870: defense response signaling pathway, resistance gene-dependent8.77E-03
104GO:0006535: cysteine biosynthetic process from serine8.77E-03
105GO:0009688: abscisic acid biosynthetic process8.77E-03
106GO:0000038: very long-chain fatty acid metabolic process9.71E-03
107GO:0009073: aromatic amino acid family biosynthetic process9.71E-03
108GO:0006415: translational termination9.71E-03
109GO:0006352: DNA-templated transcription, initiation9.71E-03
110GO:0009750: response to fructose9.71E-03
111GO:0018119: peptidyl-cysteine S-nitrosylation9.71E-03
112GO:0009684: indoleacetic acid biosynthetic process9.71E-03
113GO:0006790: sulfur compound metabolic process1.07E-02
114GO:0016024: CDP-diacylglycerol biosynthetic process1.07E-02
115GO:0042546: cell wall biogenesis1.14E-02
116GO:0010588: cotyledon vascular tissue pattern formation1.17E-02
117GO:0010628: positive regulation of gene expression1.17E-02
118GO:0030036: actin cytoskeleton organization1.17E-02
119GO:0050826: response to freezing1.17E-02
120GO:0009636: response to toxic substance1.23E-02
121GO:0048467: gynoecium development1.27E-02
122GO:0010167: response to nitrate1.38E-02
123GO:0019853: L-ascorbic acid biosynthetic process1.38E-02
124GO:0046854: phosphatidylinositol phosphorylation1.38E-02
125GO:0006833: water transport1.49E-02
126GO:0009116: nucleoside metabolic process1.60E-02
127GO:0000027: ribosomal large subunit assembly1.60E-02
128GO:0007010: cytoskeleton organization1.60E-02
129GO:0071555: cell wall organization1.68E-02
130GO:0006418: tRNA aminoacylation for protein translation1.72E-02
131GO:0007017: microtubule-based process1.72E-02
132GO:0080167: response to karrikin1.75E-02
133GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.82E-02
134GO:0019915: lipid storage1.84E-02
135GO:0061077: chaperone-mediated protein folding1.84E-02
136GO:0016226: iron-sulfur cluster assembly1.96E-02
137GO:0009411: response to UV2.09E-02
138GO:0045454: cell redox homeostasis2.19E-02
139GO:0019722: calcium-mediated signaling2.22E-02
140GO:0042127: regulation of cell proliferation2.22E-02
141GO:0000271: polysaccharide biosynthetic process2.48E-02
142GO:0080022: primary root development2.48E-02
143GO:0034220: ion transmembrane transport2.48E-02
144GO:0010087: phloem or xylem histogenesis2.48E-02
145GO:0009958: positive gravitropism2.62E-02
146GO:0045489: pectin biosynthetic process2.62E-02
147GO:0010182: sugar mediated signaling pathway2.62E-02
148GO:0009793: embryo development ending in seed dormancy2.71E-02
149GO:0048825: cotyledon development2.90E-02
150GO:0008654: phospholipid biosynthetic process2.90E-02
151GO:0009851: auxin biosynthetic process2.90E-02
152GO:0042744: hydrogen peroxide catabolic process3.01E-02
153GO:0048510: regulation of timing of transition from vegetative to reproductive phase3.04E-02
154GO:0000302: response to reactive oxygen species3.04E-02
155GO:0016132: brassinosteroid biosynthetic process3.04E-02
156GO:0009790: embryo development3.09E-02
157GO:0007264: small GTPase mediated signal transduction3.19E-02
158GO:0032502: developmental process3.19E-02
159GO:1901657: glycosyl compound metabolic process3.33E-02
160GO:0005975: carbohydrate metabolic process3.39E-02
161GO:0009567: double fertilization forming a zygote and endosperm3.49E-02
162GO:0040008: regulation of growth3.49E-02
163GO:0051607: defense response to virus3.79E-02
164GO:0007166: cell surface receptor signaling pathway4.17E-02
165GO:0009627: systemic acquired resistance4.27E-02
166GO:0042128: nitrate assimilation4.27E-02
167GO:0016311: dephosphorylation4.60E-02
168GO:0009817: defense response to fungus, incompatible interaction4.77E-02
169GO:0018298: protein-chromophore linkage4.77E-02
170GO:0009813: flavonoid biosynthetic process4.94E-02
171GO:0048767: root hair elongation4.94E-02
172GO:0000160: phosphorelay signal transduction system4.94E-02
RankGO TermAdjusted P value
1GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity0.00E+00
2GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity0.00E+00
3GO:0050236: pyridoxine:NADP 4-dehydrogenase activity0.00E+00
4GO:0010301: xanthoxin dehydrogenase activity0.00E+00
5GO:0008887: glycerate kinase activity0.00E+00
6GO:0048307: ferredoxin-nitrite reductase activity0.00E+00
7GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity0.00E+00
8GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity0.00E+00
9GO:0050421: nitrite reductase (NO-forming) activity0.00E+00
10GO:0004823: leucine-tRNA ligase activity0.00E+00
11GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
12GO:0019146: arabinose-5-phosphate isomerase activity0.00E+00
13GO:0005048: signal sequence binding0.00E+00
14GO:0047889: ferredoxin-nitrate reductase activity0.00E+00
15GO:0050614: delta24-sterol reductase activity0.00E+00
16GO:0019843: rRNA binding1.46E-13
17GO:0003735: structural constituent of ribosome9.32E-09
18GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.84E-06
19GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity4.22E-06
20GO:0005528: FK506 binding1.13E-04
21GO:0051920: peroxiredoxin activity1.88E-04
22GO:0004560: alpha-L-fucosidase activity3.04E-04
23GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity3.04E-04
24GO:0001530: lipopolysaccharide binding3.04E-04
25GO:0009374: biotin binding3.04E-04
26GO:0004853: uroporphyrinogen decarboxylase activity3.04E-04
27GO:0004328: formamidase activity3.04E-04
28GO:0010347: L-galactose-1-phosphate phosphatase activity3.04E-04
29GO:0030794: (S)-coclaurine-N-methyltransferase activity3.04E-04
30GO:0004033: aldo-keto reductase (NADP) activity3.09E-04
31GO:0016209: antioxidant activity3.09E-04
32GO:0005200: structural constituent of cytoskeleton5.53E-04
33GO:0052832: inositol monophosphate 3-phosphatase activity6.66E-04
34GO:0080097: L-tryptophan:pyruvate aminotransferase activity6.66E-04
35GO:0008934: inositol monophosphate 1-phosphatase activity6.66E-04
36GO:0052833: inositol monophosphate 4-phosphatase activity6.66E-04
37GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity6.66E-04
38GO:0003938: IMP dehydrogenase activity6.66E-04
39GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity6.66E-04
40GO:0005504: fatty acid binding1.08E-03
41GO:0002161: aminoacyl-tRNA editing activity1.08E-03
42GO:0004148: dihydrolipoyl dehydrogenase activity1.08E-03
43GO:0045174: glutathione dehydrogenase (ascorbate) activity1.08E-03
44GO:0070402: NADPH binding1.08E-03
45GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity1.55E-03
46GO:0035250: UDP-galactosyltransferase activity1.55E-03
47GO:0016149: translation release factor activity, codon specific1.55E-03
48GO:0016851: magnesium chelatase activity1.55E-03
49GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides1.55E-03
50GO:0004550: nucleoside diphosphate kinase activity1.55E-03
51GO:0008097: 5S rRNA binding1.55E-03
52GO:0004364: glutathione transferase activity1.57E-03
53GO:0004045: aminoacyl-tRNA hydrolase activity2.07E-03
54GO:0016987: sigma factor activity2.07E-03
55GO:0045430: chalcone isomerase activity2.07E-03
56GO:0043495: protein anchor2.07E-03
57GO:0004659: prenyltransferase activity2.07E-03
58GO:0001053: plastid sigma factor activity2.07E-03
59GO:0004845: uracil phosphoribosyltransferase activity2.07E-03
60GO:0016836: hydro-lyase activity2.07E-03
61GO:0016846: carbon-sulfur lyase activity2.65E-03
62GO:0004623: phospholipase A2 activity2.65E-03
63GO:0004040: amidase activity2.65E-03
64GO:0003989: acetyl-CoA carboxylase activity2.65E-03
65GO:0004130: cytochrome-c peroxidase activity3.27E-03
66GO:0016208: AMP binding3.27E-03
67GO:0016688: L-ascorbate peroxidase activity3.27E-03
68GO:0004605: phosphatidate cytidylyltransferase activity3.27E-03
69GO:0016762: xyloglucan:xyloglucosyl transferase activity3.55E-03
70GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity3.93E-03
71GO:0051753: mannan synthase activity3.93E-03
72GO:0004849: uridine kinase activity3.93E-03
73GO:0004124: cysteine synthase activity3.93E-03
74GO:0016722: oxidoreductase activity, oxidizing metal ions4.56E-03
75GO:0019899: enzyme binding4.64E-03
76GO:0043295: glutathione binding4.64E-03
77GO:0008312: 7S RNA binding5.39E-03
78GO:0016798: hydrolase activity, acting on glycosyl bonds6.04E-03
79GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity6.69E-03
80GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism7.01E-03
81GO:0003747: translation release factor activity7.01E-03
82GO:0003993: acid phosphatase activity8.87E-03
83GO:0051539: 4 iron, 4 sulfur cluster binding9.68E-03
84GO:0008794: arsenate reductase (glutaredoxin) activity9.71E-03
85GO:0004022: alcohol dehydrogenase (NAD) activity1.17E-02
86GO:0004089: carbonate dehydratase activity1.17E-02
87GO:0004601: peroxidase activity1.33E-02
88GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.49E-02
89GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.49E-02
90GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.49E-02
91GO:0051536: iron-sulfur cluster binding1.60E-02
92GO:0004857: enzyme inhibitor activity1.60E-02
93GO:0004650: polygalacturonase activity1.93E-02
94GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity1.96E-02
95GO:0052689: carboxylic ester hydrolase activity1.98E-02
96GO:0022891: substrate-specific transmembrane transporter activity2.09E-02
97GO:0008514: organic anion transmembrane transporter activity2.22E-02
98GO:0004812: aminoacyl-tRNA ligase activity2.35E-02
99GO:0016758: transferase activity, transferring hexosyl groups2.58E-02
100GO:0003713: transcription coactivator activity2.62E-02
101GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds2.64E-02
102GO:0010181: FMN binding2.76E-02
103GO:0003924: GTPase activity2.85E-02
104GO:0019901: protein kinase binding2.90E-02
105GO:0000156: phosphorelay response regulator activity3.33E-02
106GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.40E-02
107GO:0005525: GTP binding3.64E-02
108GO:0016597: amino acid binding3.79E-02
109GO:0015250: water channel activity3.95E-02
110GO:0008194: UDP-glycosyltransferase activity4.08E-02
111GO:0016168: chlorophyll binding4.11E-02
112GO:0102483: scopolin beta-glucosidase activity4.44E-02
113GO:0008236: serine-type peptidase activity4.60E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast6.70E-37
2GO:0009570: chloroplast stroma1.21E-30
3GO:0009941: chloroplast envelope4.52E-24
4GO:0009535: chloroplast thylakoid membrane3.51E-15
5GO:0009543: chloroplast thylakoid lumen1.46E-13
6GO:0005840: ribosome7.31E-13
7GO:0031977: thylakoid lumen7.74E-13
8GO:0009579: thylakoid2.01E-11
9GO:0009534: chloroplast thylakoid3.65E-08
10GO:0048046: apoplast2.90E-06
11GO:0031225: anchored component of membrane9.36E-06
12GO:0046658: anchored component of plasma membrane7.58E-05
13GO:0009536: plastid2.42E-04
14GO:0009505: plant-type cell wall2.58E-04
15GO:0016020: membrane2.87E-04
16GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex3.04E-04
17GO:0009515: granal stacked thylakoid3.04E-04
18GO:0080085: signal recognition particle, chloroplast targeting6.66E-04
19GO:0005618: cell wall7.75E-04
20GO:0010007: magnesium chelatase complex1.08E-03
21GO:0009509: chromoplast1.08E-03
22GO:0009317: acetyl-CoA carboxylase complex1.08E-03
23GO:0009654: photosystem II oxygen evolving complex1.60E-03
24GO:0019898: extrinsic component of membrane3.31E-03
25GO:0009533: chloroplast stromal thylakoid4.64E-03
26GO:0005576: extracellular region5.33E-03
27GO:0005786: signal recognition particle, endoplasmic reticulum targeting6.18E-03
28GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)7.01E-03
29GO:0045298: tubulin complex7.01E-03
30GO:0005763: mitochondrial small ribosomal subunit7.01E-03
31GO:0015934: large ribosomal subunit7.74E-03
32GO:0000311: plastid large ribosomal subunit1.07E-02
33GO:0032040: small-subunit processome1.07E-02
34GO:0005856: cytoskeleton1.23E-02
35GO:0030095: chloroplast photosystem II1.27E-02
36GO:0022626: cytosolic ribosome1.63E-02
37GO:0042651: thylakoid membrane1.72E-02
38GO:0031969: chloroplast membrane1.75E-02
39GO:0015935: small ribosomal subunit1.84E-02
40GO:0031410: cytoplasmic vesicle1.96E-02
41GO:0009506: plasmodesma2.42E-02
42GO:0005773: vacuole2.54E-02
43GO:0009523: photosystem II2.90E-02
44GO:0009295: nucleoid3.64E-02
45GO:0005778: peroxisomal membrane3.64E-02
46GO:0030529: intracellular ribonucleoprotein complex3.95E-02
47GO:0005886: plasma membrane4.91E-02
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Gene type



Gene DE type