Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G25290

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071474: cellular hyperosmotic response0.00E+00
2GO:0033494: ferulate metabolic process0.00E+00
3GO:0090279: regulation of calcium ion import0.00E+00
4GO:0046322: negative regulation of fatty acid oxidation0.00E+00
5GO:0006833: water transport1.45E-06
6GO:0034220: ion transmembrane transport5.28E-06
7GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process4.74E-05
8GO:0006285: base-excision repair, AP site formation4.74E-05
9GO:0015808: L-alanine transport4.74E-05
10GO:0010143: cutin biosynthetic process7.90E-05
11GO:0098712: L-glutamate import across plasma membrane1.17E-04
12GO:0015804: neutral amino acid transport1.17E-04
13GO:0051262: protein tetramerization1.17E-04
14GO:0010541: acropetal auxin transport1.17E-04
15GO:0006296: nucleotide-excision repair, DNA incision, 5'-to lesion2.00E-04
16GO:0010160: formation of animal organ boundary2.00E-04
17GO:1901562: response to paraquat2.00E-04
18GO:0051639: actin filament network formation2.94E-04
19GO:0080170: hydrogen peroxide transmembrane transport2.94E-04
20GO:0043481: anthocyanin accumulation in tissues in response to UV light2.94E-04
21GO:0010306: rhamnogalacturonan II biosynthetic process2.94E-04
22GO:1901332: negative regulation of lateral root development2.94E-04
23GO:0051764: actin crosslink formation3.94E-04
24GO:0009107: lipoate biosynthetic process5.00E-04
25GO:0055085: transmembrane transport5.14E-04
26GO:0060918: auxin transport6.13E-04
27GO:0043090: amino acid import8.54E-04
28GO:0010196: nonphotochemical quenching8.54E-04
29GO:0009787: regulation of abscisic acid-activated signaling pathway9.81E-04
30GO:0009414: response to water deprivation1.00E-03
31GO:0009624: response to nematode1.66E-03
32GO:0009684: indoleacetic acid biosynthetic process1.70E-03
33GO:0019684: photosynthesis, light reaction1.70E-03
34GO:0008361: regulation of cell size1.86E-03
35GO:0016024: CDP-diacylglycerol biosynthetic process1.86E-03
36GO:0010540: basipetal auxin transport2.20E-03
37GO:0010030: positive regulation of seed germination2.38E-03
38GO:0010025: wax biosynthetic process2.56E-03
39GO:0051017: actin filament bundle assembly2.74E-03
40GO:0007017: microtubule-based process2.93E-03
41GO:0010431: seed maturation3.12E-03
42GO:0061077: chaperone-mediated protein folding3.12E-03
43GO:0009737: response to abscisic acid3.24E-03
44GO:0035428: hexose transmembrane transport3.32E-03
45GO:0048443: stamen development3.73E-03
46GO:0006284: base-excision repair3.73E-03
47GO:0009789: positive regulation of abscisic acid-activated signaling pathway3.93E-03
48GO:0042631: cellular response to water deprivation4.15E-03
49GO:0006662: glycerol ether metabolic process4.37E-03
50GO:0048868: pollen tube development4.37E-03
51GO:0046323: glucose import4.37E-03
52GO:0009958: positive gravitropism4.37E-03
53GO:1901657: glycosyl compound metabolic process5.52E-03
54GO:0009639: response to red or far red light5.75E-03
55GO:0009651: response to salt stress6.46E-03
56GO:0045454: cell redox homeostasis6.48E-03
57GO:0042128: nitrate assimilation7.01E-03
58GO:0006629: lipid metabolic process7.99E-03
59GO:0010311: lateral root formation8.09E-03
60GO:0010218: response to far red light8.37E-03
61GO:0048527: lateral root development8.65E-03
62GO:0006810: transport9.12E-03
63GO:0009637: response to blue light9.22E-03
64GO:0034599: cellular response to oxidative stress9.51E-03
65GO:0006631: fatty acid metabolic process1.04E-02
66GO:0009926: auxin polar transport1.10E-02
67GO:0009640: photomorphogenesis1.10E-02
68GO:0009734: auxin-activated signaling pathway1.13E-02
69GO:0009644: response to high light intensity1.16E-02
70GO:0006486: protein glycosylation1.36E-02
71GO:0006857: oligopeptide transport1.43E-02
72GO:0009742: brassinosteroid mediated signaling pathway1.82E-02
73GO:0006413: translational initiation2.45E-02
74GO:0007623: circadian rhythm2.57E-02
75GO:0009733: response to auxin3.24E-02
76GO:0009860: pollen tube growth3.70E-02
77GO:0006970: response to osmotic stress3.70E-02
78GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway4.19E-02
79GO:0046777: protein autophosphorylation4.30E-02
80GO:0015979: photosynthesis4.50E-02
81GO:0045892: negative regulation of transcription, DNA-templated4.71E-02
82GO:0006869: lipid transport4.97E-02
RankGO TermAdjusted P value
1GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity0.00E+00
2GO:0043864: indoleacetamide hydrolase activity0.00E+00
3GO:0015250: water channel activity1.62E-05
4GO:0000703: oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity4.74E-05
5GO:0005227: calcium activated cation channel activity4.74E-05
6GO:0015194: L-serine transmembrane transporter activity4.74E-05
7GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity4.74E-05
8GO:0015180: L-alanine transmembrane transporter activity1.17E-04
9GO:0030385: ferredoxin:thioredoxin reductase activity1.17E-04
10GO:0070330: aromatase activity2.00E-04
11GO:0050734: hydroxycinnamoyltransferase activity2.00E-04
12GO:0016992: lipoate synthase activity2.00E-04
13GO:0015193: L-proline transmembrane transporter activity2.00E-04
14GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity2.94E-04
15GO:0015186: L-glutamine transmembrane transporter activity2.94E-04
16GO:0015175: neutral amino acid transmembrane transporter activity2.94E-04
17GO:0019104: DNA N-glycosylase activity3.94E-04
18GO:0005313: L-glutamate transmembrane transporter activity3.94E-04
19GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds3.94E-04
20GO:0004040: amidase activity5.00E-04
21GO:0018685: alkane 1-monooxygenase activity5.00E-04
22GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity6.13E-04
23GO:0004366: glycerol-3-phosphate O-acyltransferase activity6.13E-04
24GO:0005261: cation channel activity7.31E-04
25GO:0009927: histidine phosphotransfer kinase activity7.31E-04
26GO:0015293: symporter activity9.98E-04
27GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors1.25E-03
28GO:0044183: protein binding involved in protein folding1.70E-03
29GO:0008378: galactosyltransferase activity1.86E-03
30GO:0010329: auxin efflux transmembrane transporter activity2.03E-03
31GO:0005528: FK506 binding2.74E-03
32GO:0042626: ATPase activity, coupled to transmembrane movement of substances3.60E-03
33GO:0047134: protein-disulfide reductase activity3.93E-03
34GO:0004791: thioredoxin-disulfide reductase activity4.59E-03
35GO:0005355: glucose transmembrane transporter activity4.59E-03
36GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor5.52E-03
37GO:0051015: actin filament binding5.52E-03
38GO:0016791: phosphatase activity5.75E-03
39GO:0005200: structural constituent of cytoskeleton6.00E-03
40GO:0042803: protein homodimerization activity6.79E-03
41GO:0102483: scopolin beta-glucosidase activity7.28E-03
42GO:0008422: beta-glucosidase activity9.80E-03
43GO:0051539: 4 iron, 4 sulfur cluster binding1.01E-02
44GO:0005198: structural molecule activity1.20E-02
45GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.23E-02
46GO:0015171: amino acid transmembrane transporter activity1.46E-02
47GO:0031625: ubiquitin protein ligase binding1.46E-02
48GO:0045735: nutrient reservoir activity1.53E-02
49GO:0015035: protein disulfide oxidoreductase activity1.78E-02
50GO:0016746: transferase activity, transferring acyl groups1.78E-02
51GO:0016758: transferase activity, transferring hexosyl groups2.01E-02
52GO:0015144: carbohydrate transmembrane transporter activity2.33E-02
53GO:0005351: sugar:proton symporter activity2.53E-02
54GO:0003743: translation initiation factor activity2.88E-02
55GO:0005215: transporter activity3.19E-02
56GO:0008168: methyltransferase activity3.42E-02
57GO:0016788: hydrolase activity, acting on ester bonds3.56E-02
58GO:0052689: carboxylic ester hydrolase activity4.40E-02
59GO:0004871: signal transducer activity4.81E-02
RankGO TermAdjusted P value
1GO:0010287: plastoglobule1.82E-04
2GO:0009507: chloroplast2.91E-04
3GO:0032432: actin filament bundle2.94E-04
4GO:0009534: chloroplast thylakoid4.77E-04
5GO:0016021: integral component of membrane6.23E-04
6GO:0009535: chloroplast thylakoid membrane7.58E-04
7GO:0042644: chloroplast nucleoid1.25E-03
8GO:0045298: tubulin complex1.25E-03
9GO:0005887: integral component of plasma membrane1.64E-03
10GO:0005884: actin filament1.70E-03
11GO:0009543: chloroplast thylakoid lumen2.07E-03
12GO:0009941: chloroplast envelope2.76E-03
13GO:0042651: thylakoid membrane2.93E-03
14GO:0009707: chloroplast outer membrane7.81E-03
15GO:0005886: plasma membrane8.18E-03
16GO:0005618: cell wall8.32E-03
17GO:0031977: thylakoid lumen1.04E-02
18GO:0016020: membrane1.24E-02
19GO:0009570: chloroplast stroma1.78E-02
20GO:0046658: anchored component of plasma membrane3.14E-02
21GO:0005874: microtubule4.00E-02
22GO:0031969: chloroplast membrane4.09E-02
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Gene type



Gene DE type