GO Enrichment Analysis of Co-expressed Genes with
AT1G24510
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006182: cGMP biosynthetic process | 0.00E+00 |
| 2 | GO:0039694: viral RNA genome replication | 0.00E+00 |
| 3 | GO:0090069: regulation of ribosome biogenesis | 0.00E+00 |
| 4 | GO:0006390: transcription from mitochondrial promoter | 2.76E-05 |
| 5 | GO:0006430: lysyl-tRNA aminoacylation | 2.76E-05 |
| 6 | GO:0006177: GMP biosynthetic process | 2.76E-05 |
| 7 | GO:1990641: response to iron ion starvation | 2.76E-05 |
| 8 | GO:2000232: regulation of rRNA processing | 2.76E-05 |
| 9 | GO:0006101: citrate metabolic process | 7.01E-05 |
| 10 | GO:0008535: respiratory chain complex IV assembly | 7.01E-05 |
| 11 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 7.01E-05 |
| 12 | GO:0006413: translational initiation | 1.05E-04 |
| 13 | GO:1902626: assembly of large subunit precursor of preribosome | 1.23E-04 |
| 14 | GO:0042256: mature ribosome assembly | 1.23E-04 |
| 15 | GO:0045039: protein import into mitochondrial inner membrane | 1.23E-04 |
| 16 | GO:0080156: mitochondrial mRNA modification | 1.46E-04 |
| 17 | GO:0042823: pyridoxal phosphate biosynthetic process | 1.83E-04 |
| 18 | GO:0000460: maturation of 5.8S rRNA | 2.48E-04 |
| 19 | GO:0051205: protein insertion into membrane | 2.48E-04 |
| 20 | GO:0006097: glyoxylate cycle | 3.18E-04 |
| 21 | GO:0006461: protein complex assembly | 3.18E-04 |
| 22 | GO:0006099: tricarboxylic acid cycle | 3.77E-04 |
| 23 | GO:0000470: maturation of LSU-rRNA | 3.92E-04 |
| 24 | GO:0016554: cytidine to uridine editing | 3.92E-04 |
| 25 | GO:0000054: ribosomal subunit export from nucleus | 4.69E-04 |
| 26 | GO:0042773: ATP synthesis coupled electron transport | 5.49E-04 |
| 27 | GO:0006102: isocitrate metabolic process | 6.32E-04 |
| 28 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 6.32E-04 |
| 29 | GO:0046686: response to cadmium ion | 7.04E-04 |
| 30 | GO:0010053: root epidermal cell differentiation | 1.50E-03 |
| 31 | GO:0009617: response to bacterium | 1.72E-03 |
| 32 | GO:0007010: cytoskeleton organization | 1.73E-03 |
| 33 | GO:0071215: cellular response to abscisic acid stimulus | 2.22E-03 |
| 34 | GO:0008033: tRNA processing | 2.61E-03 |
| 35 | GO:0010501: RNA secondary structure unwinding | 2.61E-03 |
| 36 | GO:0009615: response to virus | 4.06E-03 |
| 37 | GO:0048481: plant ovule development | 4.87E-03 |
| 38 | GO:0048767: root hair elongation | 5.04E-03 |
| 39 | GO:0009853: photorespiration | 5.73E-03 |
| 40 | GO:0009793: embryo development ending in seed dormancy | 6.71E-03 |
| 41 | GO:0006855: drug transmembrane transport | 7.59E-03 |
| 42 | GO:0006486: protein glycosylation | 8.40E-03 |
| 43 | GO:0006417: regulation of translation | 9.01E-03 |
| 44 | GO:0009620: response to fungus | 1.01E-02 |
| 45 | GO:0000398: mRNA splicing, via spliceosome | 1.19E-02 |
| 46 | GO:0009845: seed germination | 1.33E-02 |
| 47 | GO:0006979: response to oxidative stress | 1.46E-02 |
| 48 | GO:0009451: RNA modification | 1.61E-02 |
| 49 | GO:0007166: cell surface receptor signaling pathway | 1.74E-02 |
| 50 | GO:0008380: RNA splicing | 1.79E-02 |
| 51 | GO:0009860: pollen tube growth | 2.27E-02 |
| 52 | GO:0032259: methylation | 3.22E-02 |
| 53 | GO:0009751: response to salicylic acid | 3.29E-02 |
| 54 | GO:0009408: response to heat | 3.32E-02 |
| 55 | GO:0048364: root development | 3.42E-02 |
| 56 | GO:0009735: response to cytokinin | 4.68E-02 |
| 57 | GO:0009651: response to salt stress | 4.84E-02 |
| 58 | GO:0009416: response to light stimulus | 4.99E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.49E-05 |
| 2 | GO:0004824: lysine-tRNA ligase activity | 2.76E-05 |
| 3 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 7.01E-05 |
| 4 | GO:0003938: IMP dehydrogenase activity | 7.01E-05 |
| 5 | GO:0003994: aconitate hydratase activity | 7.01E-05 |
| 6 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 7.01E-05 |
| 7 | GO:0048531: beta-1,3-galactosyltransferase activity | 7.01E-05 |
| 8 | GO:0004383: guanylate cyclase activity | 1.23E-04 |
| 9 | GO:0019003: GDP binding | 1.23E-04 |
| 10 | GO:0010181: FMN binding | 1.25E-04 |
| 11 | GO:0003743: translation initiation factor activity | 1.45E-04 |
| 12 | GO:0043023: ribosomal large subunit binding | 1.83E-04 |
| 13 | GO:0005496: steroid binding | 3.18E-04 |
| 14 | GO:0004656: procollagen-proline 4-dioxygenase activity | 4.69E-04 |
| 15 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 6.17E-04 |
| 16 | GO:0043022: ribosome binding | 6.32E-04 |
| 17 | GO:0003729: mRNA binding | 6.58E-04 |
| 18 | GO:0001054: RNA polymerase I activity | 1.09E-03 |
| 19 | GO:0005507: copper ion binding | 1.49E-03 |
| 20 | GO:0051536: iron-sulfur cluster binding | 1.73E-03 |
| 21 | GO:0031418: L-ascorbic acid binding | 1.73E-03 |
| 22 | GO:0003954: NADH dehydrogenase activity | 1.73E-03 |
| 23 | GO:0005524: ATP binding | 2.26E-03 |
| 24 | GO:0003713: transcription coactivator activity | 2.74E-03 |
| 25 | GO:0008137: NADH dehydrogenase (ubiquinone) activity | 3.16E-03 |
| 26 | GO:0005200: structural constituent of cytoskeleton | 3.75E-03 |
| 27 | GO:0004004: ATP-dependent RNA helicase activity | 4.54E-03 |
| 28 | GO:0030247: polysaccharide binding | 4.54E-03 |
| 29 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 4.87E-03 |
| 30 | GO:0015238: drug transmembrane transporter activity | 5.04E-03 |
| 31 | GO:0050897: cobalt ion binding | 5.38E-03 |
| 32 | GO:0003697: single-stranded DNA binding | 5.73E-03 |
| 33 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 5.73E-03 |
| 34 | GO:0000166: nucleotide binding | 7.12E-03 |
| 35 | GO:0051537: 2 iron, 2 sulfur cluster binding | 7.20E-03 |
| 36 | GO:0043621: protein self-association | 7.20E-03 |
| 37 | GO:0003723: RNA binding | 8.01E-03 |
| 38 | GO:0008026: ATP-dependent helicase activity | 1.12E-02 |
| 39 | GO:0004386: helicase activity | 1.14E-02 |
| 40 | GO:0005515: protein binding | 1.27E-02 |
| 41 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.28E-02 |
| 42 | GO:0016829: lyase activity | 1.33E-02 |
| 43 | GO:0003676: nucleic acid binding | 1.40E-02 |
| 44 | GO:0015297: antiporter activity | 1.53E-02 |
| 45 | GO:0016491: oxidoreductase activity | 1.91E-02 |
| 46 | GO:0008168: methyltransferase activity | 2.10E-02 |
| 47 | GO:0046982: protein heterodimerization activity | 2.13E-02 |
| 48 | GO:0046872: metal ion binding | 2.81E-02 |
| 49 | GO:0003924: GTPase activity | 3.32E-02 |
| 50 | GO:0009055: electron carrier activity | 3.49E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019034: viral replication complex | 0.00E+00 |
| 2 | GO:0005829: cytosol | 2.56E-07 |
| 3 | GO:0034245: mitochondrial DNA-directed RNA polymerase complex | 2.76E-05 |
| 4 | GO:0070545: PeBoW complex | 7.01E-05 |
| 5 | GO:0030687: preribosome, large subunit precursor | 5.49E-04 |
| 6 | GO:0005730: nucleolus | 7.98E-04 |
| 7 | GO:0005736: DNA-directed RNA polymerase I complex | 8.07E-04 |
| 8 | GO:0005852: eukaryotic translation initiation factor 3 complex | 1.09E-03 |
| 9 | GO:0043234: protein complex | 1.62E-03 |
| 10 | GO:0045271: respiratory chain complex I | 1.85E-03 |
| 11 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 2.43E-03 |
| 12 | GO:0005743: mitochondrial inner membrane | 3.75E-03 |
| 13 | GO:0005856: cytoskeleton | 7.40E-03 |
| 14 | GO:0031966: mitochondrial membrane | 7.99E-03 |
| 15 | GO:0005681: spliceosomal complex | 9.44E-03 |
| 16 | GO:0005747: mitochondrial respiratory chain complex I | 9.65E-03 |
| 17 | GO:0016607: nuclear speck | 9.65E-03 |
| 18 | GO:0005654: nucleoplasm | 1.24E-02 |
| 19 | GO:0005618: cell wall | 1.33E-02 |
| 20 | GO:0046658: anchored component of plasma membrane | 1.93E-02 |
| 21 | GO:0005739: mitochondrion | 2.01E-02 |
| 22 | GO:0005794: Golgi apparatus | 2.78E-02 |
| 23 | GO:0005737: cytoplasm | 3.98E-02 |
| 24 | GO:0005774: vacuolar membrane | 4.99E-02 |