Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G23290

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0044843: cell cycle G1/S phase transition0.00E+00
2GO:0006412: translation1.35E-136
3GO:0042254: ribosome biogenesis1.96E-51
4GO:0000027: ribosomal large subunit assembly2.20E-15
5GO:0009735: response to cytokinin1.16E-07
6GO:0009955: adaxial/abaxial pattern specification6.14E-05
7GO:0000028: ribosomal small subunit assembly1.06E-04
8GO:0006407: rRNA export from nucleus1.50E-04
9GO:0030490: maturation of SSU-rRNA1.50E-04
10GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)1.50E-04
11GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)1.50E-04
12GO:0009409: response to cold3.35E-04
13GO:0048569: post-embryonic animal organ development3.42E-04
14GO:0009967: positive regulation of signal transduction3.42E-04
15GO:0006626: protein targeting to mitochondrion3.54E-04
16GO:0006414: translational elongation3.87E-04
17GO:0009965: leaf morphogenesis5.44E-04
18GO:1902626: assembly of large subunit precursor of preribosome5.61E-04
19GO:0002181: cytoplasmic translation5.61E-04
20GO:0010476: gibberellin mediated signaling pathway5.61E-04
21GO:0042256: mature ribosome assembly5.61E-04
22GO:0006364: rRNA processing6.84E-04
23GO:0070301: cellular response to hydrogen peroxide8.03E-04
24GO:0006241: CTP biosynthetic process8.03E-04
25GO:0006165: nucleoside diphosphate phosphorylation8.03E-04
26GO:0006228: UTP biosynthetic process8.03E-04
27GO:0044205: 'de novo' UMP biosynthetic process1.06E-03
28GO:0042274: ribosomal small subunit biogenesis1.06E-03
29GO:0006183: GTP biosynthetic process1.06E-03
30GO:0009793: embryo development ending in seed dormancy1.11E-03
31GO:0071493: cellular response to UV-B1.35E-03
32GO:0000470: maturation of LSU-rRNA1.65E-03
33GO:0000911: cytokinesis by cell plate formation1.98E-03
34GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process2.33E-03
35GO:0001558: regulation of cell growth3.08E-03
36GO:0006526: arginine biosynthetic process3.08E-03
37GO:0000387: spliceosomal snRNP assembly3.91E-03
38GO:0008283: cell proliferation3.98E-03
39GO:0009644: response to high light intensity4.30E-03
40GO:0010015: root morphogenesis4.80E-03
41GO:0006913: nucleocytoplasmic transport4.80E-03
42GO:0006820: anion transport5.27E-03
43GO:0010102: lateral root morphogenesis5.75E-03
44GO:0048467: gynoecium development6.25E-03
45GO:0006541: glutamine metabolic process6.25E-03
46GO:0030150: protein import into mitochondrial matrix7.84E-03
47GO:0051302: regulation of cell division8.40E-03
48GO:0007005: mitochondrion organization9.56E-03
49GO:0040007: growth1.02E-02
50GO:0071215: cellular response to abscisic acid stimulus1.02E-02
51GO:0009749: response to glucose1.41E-02
52GO:0032502: developmental process1.55E-02
53GO:0010090: trichome morphogenesis1.62E-02
54GO:0046686: response to cadmium ion2.12E-02
55GO:0006811: ion transport2.48E-02
56GO:0010043: response to zinc ion2.56E-02
57GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process3.76E-02
58GO:0006417: regulation of translation4.36E-02
59GO:0009620: response to fungus4.88E-02
RankGO TermAdjusted P value
1GO:0003735: structural constituent of ribosome3.56E-167
2GO:0003729: mRNA binding1.56E-43
3GO:0019843: rRNA binding9.88E-10
4GO:0008097: 5S rRNA binding9.63E-06
5GO:0004088: carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity1.50E-04
6GO:0005078: MAP-kinase scaffold activity3.42E-04
7GO:0032947: protein complex scaffold5.61E-04
8GO:0070181: small ribosomal subunit rRNA binding5.61E-04
9GO:0004550: nucleoside diphosphate kinase activity8.03E-04
10GO:0008235: metalloexopeptidase activity2.33E-03
11GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity2.45E-03
12GO:0015288: porin activity2.70E-03
13GO:0008308: voltage-gated anion channel activity3.08E-03
14GO:0015266: protein channel activity5.75E-03
15GO:0003723: RNA binding5.80E-03
16GO:0003746: translation elongation factor activity2.74E-02
RankGO TermAdjusted P value
1GO:0043186: P granule0.00E+00
2GO:0022626: cytosolic ribosome2.74E-127
3GO:0005840: ribosome3.20E-100
4GO:0022625: cytosolic large ribosomal subunit3.32E-100
5GO:0022627: cytosolic small ribosomal subunit5.70E-64
6GO:0005730: nucleolus7.32E-46
7GO:0005737: cytoplasm1.68E-39
8GO:0005829: cytosol1.64E-36
9GO:0009506: plasmodesma5.03E-32
10GO:0005774: vacuolar membrane1.58E-20
11GO:0015934: large ribosomal subunit1.12E-19
12GO:0016020: membrane2.76E-19
13GO:0005618: cell wall5.93E-13
14GO:0015935: small ribosomal subunit8.29E-13
15GO:0005773: vacuole6.98E-11
16GO:0005886: plasma membrane3.42E-09
17GO:0009507: chloroplast1.72E-06
18GO:0005742: mitochondrial outer membrane translocase complex1.33E-04
19GO:0005951: carbamoyl-phosphate synthase complex1.50E-04
20GO:0030686: 90S preribosome1.50E-04
21GO:0034719: SMN-Sm protein complex5.61E-04
22GO:0005853: eukaryotic translation elongation factor 1 complex5.61E-04
23GO:0005682: U5 snRNP1.06E-03
24GO:0005687: U4 snRNP1.35E-03
25GO:0097526: spliceosomal tri-snRNP complex1.35E-03
26GO:0005689: U12-type spliceosomal complex1.98E-03
27GO:0005622: intracellular2.26E-03
28GO:0071004: U2-type prespliceosome2.70E-03
29GO:0046930: pore complex3.08E-03
30GO:0005685: U1 snRNP3.49E-03
31GO:0071011: precatalytic spliceosome3.91E-03
32GO:0005686: U2 snRNP4.35E-03
33GO:0071013: catalytic step 2 spliceosome4.80E-03
34GO:0019013: viral nucleocapsid5.75E-03
35GO:0005758: mitochondrial intermembrane space7.84E-03
36GO:0005741: mitochondrial outer membrane8.97E-03
37GO:0030529: intracellular ribonucleoprotein complex1.92E-02
38GO:0005743: mitochondrial inner membrane3.48E-02
39GO:0005681: spliceosomal complex4.56E-02
40GO:0005834: heterotrimeric G-protein complex4.78E-02
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Gene type



Gene DE type