co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G21520

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0030149: sphingolipid catabolic process	0.00E+00
2	GO:0080052: response to histidine	0.00E+00
3	GO:0006983: ER overload response	0.00E+00
4	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
5	GO:0072722: response to amitrole	0.00E+00
6	GO:0006592: ornithine biosynthetic process	0.00E+00
7	GO:0043201: response to leucine	0.00E+00
8	GO:0080053: response to phenylalanine	0.00E+00
9	GO:0002376: immune system process	0.00E+00
10	GO:0034976: response to endoplasmic reticulum stress	1.16E-09
11	GO:0009627: systemic acquired resistance	5.49E-09
12	GO:0042742: defense response to bacterium	1.28E-08
13	GO:0006102: isocitrate metabolic process	1.06E-07
14	GO:0006099: tricarboxylic acid cycle	7.61E-07
15	GO:0006511: ubiquitin-dependent protein catabolic process	9.70E-07
16	GO:0046686: response to cadmium ion	1.34E-06
17	GO:0006101: citrate metabolic process	4.70E-06
18	GO:0010150: leaf senescence	4.59E-05
19	GO:0045454: cell redox homeostasis	5.67E-05
20	GO:0006097: glyoxylate cycle	1.04E-04
21	GO:0009697: salicylic acid biosynthetic process	1.04E-04
22	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	1.50E-04
23	GO:0043248: proteasome assembly	1.50E-04
24	GO:0006457: protein folding	1.95E-04
25	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	2.05E-04
26	GO:1900057: positive regulation of leaf senescence	2.67E-04
27	GO:1901183: positive regulation of camalexin biosynthetic process	3.22E-04
28	GO:0043266: regulation of potassium ion transport	3.22E-04
29	GO:0010230: alternative respiration	3.22E-04
30	GO:0046244: salicylic acid catabolic process	3.22E-04
31	GO:0010266: response to vitamin B1	3.22E-04
32	GO:0019276: UDP-N-acetylgalactosamine metabolic process	3.22E-04
33	GO:0080120: CAAX-box protein maturation	3.22E-04
34	GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine	3.22E-04
35	GO:0034975: protein folding in endoplasmic reticulum	3.22E-04
36	GO:0035266: meristem growth	3.22E-04
37	GO:0071586: CAAX-box protein processing	3.22E-04
38	GO:0007292: female gamete generation	3.22E-04
39	GO:0006047: UDP-N-acetylglucosamine metabolic process	3.22E-04
40	GO:1990641: response to iron ion starvation	3.22E-04
41	GO:0010204: defense response signaling pathway, resistance gene-independent	4.12E-04
42	GO:0000302: response to reactive oxygen species	4.44E-04
43	GO:0009751: response to salicylic acid	4.92E-04
44	GO:1900426: positive regulation of defense response to bacterium	5.85E-04
45	GO:0043066: negative regulation of apoptotic process	7.02E-04
46	GO:0019752: carboxylic acid metabolic process	7.02E-04
47	GO:0051788: response to misfolded protein	7.02E-04
48	GO:0042939: tripeptide transport	7.02E-04
49	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	7.02E-04
50	GO:0031349: positive regulation of defense response	7.02E-04
51	GO:0008535: respiratory chain complex IV assembly	7.02E-04
52	GO:0030003: cellular cation homeostasis	7.02E-04
53	GO:0009866: induced systemic resistance, ethylene mediated signaling pathway	7.02E-04
54	GO:0006952: defense response	1.08E-03
55	GO:0009407: toxin catabolic process	1.12E-03
56	GO:0032940: secretion by cell	1.14E-03
57	GO:0002230: positive regulation of defense response to virus by host	1.14E-03
58	GO:0006011: UDP-glucose metabolic process	1.14E-03
59	GO:0010272: response to silver ion	1.14E-03
60	GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	1.14E-03
61	GO:0060968: regulation of gene silencing	1.14E-03
62	GO:0006048: UDP-N-acetylglucosamine biosynthetic process	1.14E-03
63	GO:0010043: response to zinc ion	1.19E-03
64	GO:0090351: seedling development	1.28E-03
65	GO:0000162: tryptophan biosynthetic process	1.42E-03
66	GO:1902290: positive regulation of defense response to oomycetes	1.63E-03
67	GO:0001676: long-chain fatty acid metabolic process	1.63E-03
68	GO:0010116: positive regulation of abscisic acid biosynthetic process	1.63E-03
69	GO:0002239: response to oomycetes	1.63E-03
70	GO:0033014: tetrapyrrole biosynthetic process	1.63E-03
71	GO:0016998: cell wall macromolecule catabolic process	1.91E-03
72	GO:0006979: response to oxidative stress	2.04E-03
73	GO:0030433: ubiquitin-dependent ERAD pathway	2.09E-03
74	GO:0031348: negative regulation of defense response	2.09E-03
75	GO:0071456: cellular response to hypoxia	2.09E-03
76	GO:0080142: regulation of salicylic acid biosynthetic process	2.19E-03
77	GO:0042938: dipeptide transport	2.19E-03
78	GO:0080037: negative regulation of cytokinin-activated signaling pathway	2.19E-03
79	GO:0070534: protein K63-linked ubiquitination	2.19E-03
80	GO:0051365: cellular response to potassium ion starvation	2.19E-03
81	GO:0010387: COP9 signalosome assembly	2.19E-03
82	GO:1902584: positive regulation of response to water deprivation	2.19E-03
83	GO:0071219: cellular response to molecule of bacterial origin	2.19E-03
84	GO:0009617: response to bacterium	2.23E-03
85	GO:0006486: protein glycosylation	2.69E-03
86	GO:2000762: regulation of phenylpropanoid metabolic process	2.80E-03
87	GO:0046283: anthocyanin-containing compound metabolic process	2.80E-03
88	GO:0005513: detection of calcium ion	2.80E-03
89	GO:0000304: response to singlet oxygen	2.80E-03
90	GO:0045927: positive regulation of growth	2.80E-03
91	GO:0051603: proteolysis involved in cellular protein catabolic process	2.81E-03
92	GO:0042631: cellular response to water deprivation	2.89E-03
93	GO:0018258: protein O-linked glycosylation via hydroxyproline	3.46E-03
94	GO:0002238: response to molecule of fungal origin	3.46E-03
95	GO:0006014: D-ribose metabolic process	3.46E-03
96	GO:0006121: mitochondrial electron transport, succinate to ubiquinone	3.46E-03
97	GO:0010405: arabinogalactan protein metabolic process	3.46E-03
98	GO:0006301: postreplication repair	3.46E-03
99	GO:0048827: phyllome development	3.46E-03
100	GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation	3.46E-03
101	GO:0048232: male gamete generation	3.46E-03
102	GO:0009626: plant-type hypersensitive response	3.61E-03
103	GO:0009737: response to abscisic acid	3.77E-03
104	GO:0002229: defense response to oomycetes	3.85E-03
105	GO:0010193: response to ozone	3.85E-03
106	GO:0009409: response to cold	3.90E-03
107	GO:0009612: response to mechanical stimulus	4.17E-03
108	GO:0034389: lipid particle organization	4.17E-03
109	GO:0010555: response to mannitol	4.17E-03
110	GO:0042372: phylloquinone biosynthetic process	4.17E-03
111	GO:0030163: protein catabolic process	4.38E-03
112	GO:0010252: auxin homeostasis	4.67E-03
113	GO:0010200: response to chitin	4.85E-03
114	GO:1902074: response to salt	4.92E-03
115	GO:0050790: regulation of catalytic activity	4.92E-03
116	GO:1900056: negative regulation of leaf senescence	4.92E-03
117	GO:0080186: developmental vegetative growth	4.92E-03
118	GO:0000338: protein deneddylation	4.92E-03
119	GO:0009787: regulation of abscisic acid-activated signaling pathway	5.71E-03
120	GO:0006605: protein targeting	5.71E-03
121	GO:0030162: regulation of proteolysis	5.71E-03
122	GO:0010078: maintenance of root meristem identity	5.71E-03
123	GO:0006875: cellular metal ion homeostasis	5.71E-03
124	GO:0055075: potassium ion homeostasis	5.71E-03
125	GO:0030091: protein repair	5.71E-03
126	GO:0010120: camalexin biosynthetic process	6.55E-03
127	GO:0006526: arginine biosynthetic process	6.55E-03
128	GO:0030968: endoplasmic reticulum unfolded protein response	6.55E-03
129	GO:0009817: defense response to fungus, incompatible interaction	7.27E-03
130	GO:0006783: heme biosynthetic process	7.42E-03
131	GO:0010112: regulation of systemic acquired resistance	7.42E-03
132	GO:0046685: response to arsenic-containing substance	7.42E-03
133	GO:0032259: methylation	7.80E-03
134	GO:0048354: mucilage biosynthetic process involved in seed coat development	8.34E-03
135	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	8.34E-03
136	GO:0010205: photoinhibition	8.34E-03
137	GO:0043067: regulation of programmed cell death	8.34E-03
138	GO:0045087: innate immune response	9.22E-03
139	GO:0009870: defense response signaling pathway, resistance gene-dependent	9.30E-03
140	GO:0006032: chitin catabolic process	9.30E-03
141	GO:0009688: abscisic acid biosynthetic process	9.30E-03
142	GO:0043069: negative regulation of programmed cell death	9.30E-03
143	GO:0048829: root cap development	9.30E-03
144	GO:0007064: mitotic sister chromatid cohesion	9.30E-03
145	GO:0009807: lignan biosynthetic process	1.03E-02
146	GO:0000272: polysaccharide catabolic process	1.03E-02
147	GO:0010015: root morphogenesis	1.03E-02
148	GO:0000038: very long-chain fatty acid metabolic process	1.03E-02
149	GO:0006816: calcium ion transport	1.03E-02
150	GO:0009089: lysine biosynthetic process via diaminopimelate	1.03E-02
151	GO:0009651: response to salt stress	1.09E-02
152	GO:0016925: protein sumoylation	1.13E-02
153	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	1.13E-02
154	GO:0006790: sulfur compound metabolic process	1.13E-02
155	GO:0042542: response to hydrogen peroxide	1.14E-02
156	GO:0051707: response to other organism	1.19E-02
157	GO:0018107: peptidyl-threonine phosphorylation	1.24E-02
158	GO:0010075: regulation of meristem growth	1.24E-02
159	GO:0009636: response to toxic substance	1.34E-02
160	GO:0009933: meristem structural organization	1.35E-02
161	GO:0009934: regulation of meristem structural organization	1.35E-02
162	GO:0010039: response to iron ion	1.46E-02
163	GO:0046854: phosphatidylinositol phosphorylation	1.46E-02
164	GO:0010053: root epidermal cell differentiation	1.46E-02
165	GO:0009846: pollen germination	1.50E-02
166	GO:0009863: salicylic acid mediated signaling pathway	1.70E-02
167	GO:0006487: protein N-linked glycosylation	1.70E-02
168	GO:0009695: jasmonic acid biosynthetic process	1.83E-02
169	GO:0006874: cellular calcium ion homeostasis	1.83E-02
170	GO:0009414: response to water deprivation	1.86E-02
171	GO:0006096: glycolytic process	1.91E-02
172	GO:0031408: oxylipin biosynthetic process	1.95E-02
173	GO:0019748: secondary metabolic process	2.08E-02
174	GO:0009620: response to fungus	2.10E-02
175	GO:0009625: response to insect	2.22E-02
176	GO:0009553: embryo sac development	2.23E-02
177	GO:0019722: calcium-mediated signaling	2.35E-02
178	GO:0009306: protein secretion	2.35E-02
179	GO:0010584: pollen exine formation	2.35E-02
180	GO:0042147: retrograde transport, endosome to Golgi	2.49E-02
181	GO:0006886: intracellular protein transport	2.53E-02
182	GO:0000413: protein peptidyl-prolyl isomerization	2.63E-02
183	GO:0010118: stomatal movement	2.63E-02
184	GO:0048868: pollen tube development	2.78E-02
185	GO:0006520: cellular amino acid metabolic process	2.78E-02
186	GO:0009646: response to absence of light	2.92E-02
187	GO:0019252: starch biosynthetic process	3.07E-02
188	GO:0009851: auxin biosynthetic process	3.07E-02
189	GO:0006891: intra-Golgi vesicle-mediated transport	3.23E-02
190	GO:0009790: embryo development	3.36E-02
191	GO:0009753: response to jasmonic acid	3.44E-02
192	GO:0006464: cellular protein modification process	3.70E-02
193	GO:0009567: double fertilization forming a zygote and endosperm	3.70E-02
194	GO:0009615: response to virus	4.19E-02
195	GO:0009816: defense response to bacterium, incompatible interaction	4.36E-02
196	GO:0009607: response to biotic stimulus	4.36E-02
197	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	4.43E-02
198	GO:0015995: chlorophyll biosynthetic process	4.71E-02
199	GO:0006950: response to stress	4.71E-02
200	GO:0016311: dephosphorylation	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0050220: prostaglandin-E synthase activity	0.00E+00
2	GO:0016312: inositol bisphosphate phosphatase activity	0.00E+00
3	GO:0003980: UDP-glucose:glycoprotein glucosyltransferase activity	0.00E+00
4	GO:0008777: acetylornithine deacetylase activity	0.00E+00
5	GO:0008117: sphinganine-1-phosphate aldolase activity	0.00E+00
6	GO:0004164: diphthine synthase activity	0.00E+00
7	GO:0051670: inulinase activity	0.00E+00
8	GO:0004298: threonine-type endopeptidase activity	3.37E-09
9	GO:0003756: protein disulfide isomerase activity	8.42E-09
10	GO:0008233: peptidase activity	3.43E-06
11	GO:0003994: aconitate hydratase activity	4.70E-06
12	GO:0004449: isocitrate dehydrogenase (NAD+) activity	3.71E-05
13	GO:0010279: indole-3-acetic acid amido synthetase activity	6.61E-05
14	GO:0036402: proteasome-activating ATPase activity	1.50E-04
15	GO:0004602: glutathione peroxidase activity	2.05E-04
16	GO:0008320: protein transmembrane transporter activity	2.67E-04
17	GO:0004048: anthranilate phosphoribosyltransferase activity	3.22E-04
18	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	3.22E-04
19	GO:0004321: fatty-acyl-CoA synthase activity	3.22E-04
20	GO:0008909: isochorismate synthase activity	3.22E-04
21	GO:0004325: ferrochelatase activity	3.22E-04
22	GO:0031219: levanase activity	3.22E-04
23	GO:0003977: UDP-N-acetylglucosamine diphosphorylase activity	3.22E-04
24	GO:0010285: L,L-diaminopimelate aminotransferase activity	3.22E-04
25	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	3.22E-04
26	GO:0052630: UDP-N-acetylgalactosamine diphosphorylase activity	3.22E-04
27	GO:0004425: indole-3-glycerol-phosphate synthase activity	3.22E-04
28	GO:0004112: cyclic-nucleotide phosphodiesterase activity	3.22E-04
29	GO:0051669: fructan beta-fructosidase activity	3.22E-04
30	GO:0005509: calcium ion binding	5.07E-04
31	GO:0030955: potassium ion binding	5.85E-04
32	GO:0004743: pyruvate kinase activity	5.85E-04
33	GO:0004775: succinate-CoA ligase (ADP-forming) activity	7.02E-04
34	GO:0004338: glucan exo-1,3-beta-glucosidase activity	7.02E-04
35	GO:0015036: disulfide oxidoreductase activity	7.02E-04
36	GO:0042937: tripeptide transporter activity	7.02E-04
37	GO:0004776: succinate-CoA ligase (GDP-forming) activity	7.02E-04
38	GO:0004129: cytochrome-c oxidase activity	7.88E-04
39	GO:0005507: copper ion binding	9.31E-04
40	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	1.14E-03
41	GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity	1.14E-03
42	GO:0000030: mannosyltransferase activity	1.14E-03
43	GO:0008430: selenium binding	1.14E-03
44	GO:0017025: TBP-class protein binding	1.28E-03
45	GO:0004364: glutathione transferase activity	1.75E-03
46	GO:0004031: aldehyde oxidase activity	2.19E-03
47	GO:0050302: indole-3-acetaldehyde oxidase activity	2.19E-03
48	GO:0042936: dipeptide transporter activity	2.19E-03
49	GO:0005524: ATP binding	2.39E-03
50	GO:0005452: inorganic anion exchanger activity	2.80E-03
51	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	2.80E-03
52	GO:0000104: succinate dehydrogenase activity	2.80E-03
53	GO:0005496: steroid binding	2.80E-03
54	GO:0015301: anion:anion antiporter activity	2.80E-03
55	GO:1990714: hydroxyproline O-galactosyltransferase activity	3.46E-03
56	GO:0102391: decanoate--CoA ligase activity	4.17E-03
57	GO:0004747: ribokinase activity	4.17E-03
58	GO:0005261: cation channel activity	4.17E-03
59	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	4.17E-03
60	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	4.17E-03
61	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	4.17E-03
62	GO:0015035: protein disulfide oxidoreductase activity	4.37E-03
63	GO:0016887: ATPase activity	4.50E-03
64	GO:0043295: glutathione binding	4.92E-03
65	GO:0004467: long-chain fatty acid-CoA ligase activity	4.92E-03
66	GO:0016831: carboxy-lyase activity	4.92E-03
67	GO:0016758: transferase activity, transferring hexosyl groups	5.42E-03
68	GO:0008865: fructokinase activity	5.71E-03
69	GO:0030247: polysaccharide binding	6.56E-03
70	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	6.91E-03
71	GO:0016207: 4-coumarate-CoA ligase activity	7.42E-03
72	GO:0016301: kinase activity	7.47E-03
73	GO:0004222: metalloendopeptidase activity	8.02E-03
74	GO:0045309: protein phosphorylated amino acid binding	8.34E-03
75	GO:0004568: chitinase activity	9.30E-03
76	GO:0008171: O-methyltransferase activity	9.30E-03
77	GO:0019904: protein domain specific binding	1.03E-02
78	GO:0008559: xenobiotic-transporting ATPase activity	1.03E-02
79	GO:0051539: 4 iron, 4 sulfur cluster binding	1.05E-02
80	GO:0004674: protein serine/threonine kinase activity	1.12E-02
81	GO:0008378: galactosyltransferase activity	1.13E-02
82	GO:0005262: calcium channel activity	1.24E-02
83	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.35E-02
84	GO:0004175: endopeptidase activity	1.35E-02
85	GO:0008168: methyltransferase activity	1.41E-02
86	GO:0000287: magnesium ion binding	1.44E-02
87	GO:0004970: ionotropic glutamate receptor activity	1.46E-02
88	GO:0005217: intracellular ligand-gated ion channel activity	1.46E-02
89	GO:0004190: aspartic-type endopeptidase activity	1.46E-02
90	GO:0008061: chitin binding	1.46E-02
91	GO:0031625: ubiquitin protein ligase binding	1.79E-02
92	GO:0016779: nucleotidyltransferase activity	2.08E-02
93	GO:0008810: cellulase activity	2.22E-02
94	GO:0051082: unfolded protein binding	2.30E-02
95	GO:0004499: N,N-dimethylaniline monooxygenase activity	2.35E-02
96	GO:0016853: isomerase activity	2.92E-02
97	GO:0030170: pyridoxal phosphate binding	3.19E-02
98	GO:0004197: cysteine-type endopeptidase activity	3.38E-02
99	GO:0009055: electron carrier activity	3.44E-02
100	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	3.54E-02
101	GO:0008237: metallopeptidase activity	3.86E-02
102	GO:0008483: transaminase activity	3.86E-02
103	GO:0051213: dioxygenase activity	4.19E-02
104	GO:0004806: triglyceride lipase activity	4.71E-02

Rank	GO Term	Adjusted P value
1	GO:0000327: lytic vacuole within protein storage vacuole	0.00E+00
2	GO:0005783: endoplasmic reticulum	4.68E-15
3	GO:0000502: proteasome complex	2.80E-10
4	GO:0005839: proteasome core complex	3.37E-09
5	GO:0005788: endoplasmic reticulum lumen	4.46E-09
6	GO:0005829: cytosol	4.27E-08
7	GO:0019773: proteasome core complex, alpha-subunit complex	1.79E-07
8	GO:0030134: ER to Golgi transport vesicle	4.70E-06
9	GO:0031597: cytosolic proteasome complex	2.05E-04
10	GO:0031595: nuclear proteasome complex	2.67E-04
11	GO:0005886: plasma membrane	3.04E-04
12	GO:0045252: oxoglutarate dehydrogenase complex	3.22E-04
13	GO:0005789: endoplasmic reticulum membrane	5.62E-04
14	GO:0008540: proteasome regulatory particle, base subcomplex	5.85E-04
15	GO:0031314: extrinsic component of mitochondrial inner membrane	7.02E-04
16	GO:0005773: vacuole	9.42E-04
17	GO:0005751: mitochondrial respiratory chain complex IV	1.14E-03
18	GO:0046861: glyoxysomal membrane	1.14E-03
19	GO:0005774: vacuolar membrane	1.77E-03
20	GO:0030660: Golgi-associated vesicle membrane	2.19E-03
21	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	2.19E-03
22	GO:0031372: UBC13-MMS2 complex	2.19E-03
23	GO:0008250: oligosaccharyltransferase complex	2.80E-03
24	GO:0005746: mitochondrial respiratory chain	2.80E-03
25	GO:0005737: cytoplasm	3.07E-03
26	GO:0005801: cis-Golgi network	4.17E-03
27	GO:0048046: apoplast	5.24E-03
28	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	5.71E-03
29	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	5.71E-03
30	GO:0005623: cell	5.80E-03
31	GO:0016021: integral component of membrane	5.82E-03
32	GO:0005811: lipid particle	6.55E-03
33	GO:0000326: protein storage vacuole	6.55E-03
34	GO:0009514: glyoxysome	6.55E-03
35	GO:0008180: COP9 signalosome	7.42E-03
36	GO:0009507: chloroplast	8.20E-03
37	GO:0008541: proteasome regulatory particle, lid subcomplex	1.03E-02
38	GO:0005765: lysosomal membrane	1.03E-02
39	GO:0005764: lysosome	1.35E-02
40	GO:0030176: integral component of endoplasmic reticulum membrane	1.46E-02
41	GO:0022626: cytosolic ribosome	1.85E-02
42	GO:0031969: chloroplast membrane	1.94E-02
43	GO:0005777: peroxisome	2.43E-02
44	GO:0009536: plastid	2.73E-02
45	GO:0009505: plant-type cell wall	2.83E-02
46	GO:0032580: Golgi cisterna membrane	3.70E-02
47	GO:0005618: cell wall	3.73E-02
48	GO:0005778: peroxisomal membrane	3.86E-02
49	GO:0005615: extracellular space	4.43E-02