Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G18390

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0072660: maintenance of protein location in plasma membrane0.00E+00
2GO:0009991: response to extracellular stimulus0.00E+00
3GO:0000169: activation of MAPK activity involved in osmosensory signaling pathway0.00E+00
4GO:2001253: regulation of histone H3-K36 trimethylation0.00E+00
5GO:0006987: activation of signaling protein activity involved in unfolded protein response0.00E+00
6GO:0036258: multivesicular body assembly0.00E+00
7GO:0010793: regulation of mRNA export from nucleus0.00E+00
8GO:0006468: protein phosphorylation7.16E-11
9GO:0010200: response to chitin5.84E-09
10GO:0006952: defense response3.15E-07
11GO:0046777: protein autophosphorylation1.47E-06
12GO:0031348: negative regulation of defense response4.83E-06
13GO:0048194: Golgi vesicle budding2.55E-05
14GO:0009816: defense response to bacterium, incompatible interaction4.33E-05
15GO:0060548: negative regulation of cell death4.61E-05
16GO:0009867: jasmonic acid mediated signaling pathway1.01E-04
17GO:0035556: intracellular signal transduction2.28E-04
18GO:0016559: peroxisome fission2.45E-04
19GO:0009819: drought recovery2.45E-04
20GO:0010468: regulation of gene expression2.53E-04
21GO:0048508: embryonic meristem development2.60E-04
22GO:0006805: xenobiotic metabolic process2.60E-04
23GO:0051245: negative regulation of cellular defense response2.60E-04
24GO:0000303: response to superoxide2.60E-04
25GO:0015969: guanosine tetraphosphate metabolic process2.60E-04
26GO:0006481: C-terminal protein methylation2.60E-04
27GO:0010941: regulation of cell death2.60E-04
28GO:1902265: abscisic acid homeostasis2.60E-04
29GO:0009962: regulation of flavonoid biosynthetic process2.60E-04
30GO:0080136: priming of cellular response to stress2.60E-04
31GO:0034214: protein hexamerization2.60E-04
32GO:1902065: response to L-glutamate2.60E-04
33GO:0042742: defense response to bacterium2.79E-04
34GO:0030968: endoplasmic reticulum unfolded protein response3.02E-04
35GO:0010120: camalexin biosynthetic process3.02E-04
36GO:0051865: protein autoubiquitination3.65E-04
37GO:0006904: vesicle docking involved in exocytosis4.15E-04
38GO:0006970: response to osmotic stress4.73E-04
39GO:0046740: transport of virus in host, cell to cell5.74E-04
40GO:2000072: regulation of defense response to fungus, incompatible interaction5.74E-04
41GO:0080185: effector dependent induction by symbiont of host immune response5.74E-04
42GO:0010618: aerenchyma formation5.74E-04
43GO:0050684: regulation of mRNA processing5.74E-04
44GO:0006212: uracil catabolic process5.74E-04
45GO:0007584: response to nutrient5.74E-04
46GO:0030010: establishment of cell polarity5.74E-04
47GO:0019483: beta-alanine biosynthetic process5.74E-04
48GO:0009945: radial axis specification5.74E-04
49GO:0000266: mitochondrial fission6.67E-04
50GO:0009817: defense response to fungus, incompatible interaction6.75E-04
51GO:0010102: lateral root morphogenesis7.57E-04
52GO:0009738: abscisic acid-activated signaling pathway7.99E-04
53GO:0006886: intracellular protein transport8.83E-04
54GO:0045087: innate immune response9.08E-04
55GO:0071492: cellular response to UV-A9.31E-04
56GO:0072661: protein targeting to plasma membrane9.31E-04
57GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway9.31E-04
58GO:0032784: regulation of DNA-templated transcription, elongation9.31E-04
59GO:1900140: regulation of seedling development9.31E-04
60GO:0010359: regulation of anion channel activity9.31E-04
61GO:0061158: 3'-UTR-mediated mRNA destabilization9.31E-04
62GO:0010053: root epidermal cell differentiation9.50E-04
63GO:0006887: exocytosis1.12E-03
64GO:0007166: cell surface receptor signaling pathway1.30E-03
65GO:0070676: intralumenal vesicle formation1.33E-03
66GO:0010071: root meristem specification1.33E-03
67GO:0070301: cellular response to hydrogen peroxide1.33E-03
68GO:0006809: nitric oxide biosynthetic process1.33E-03
69GO:0006612: protein targeting to membrane1.33E-03
70GO:0072583: clathrin-dependent endocytosis1.33E-03
71GO:0010148: transpiration1.33E-03
72GO:0002679: respiratory burst involved in defense response1.33E-03
73GO:0031347: regulation of defense response1.58E-03
74GO:0007165: signal transduction1.68E-03
75GO:0006878: cellular copper ion homeostasis1.78E-03
76GO:0009687: abscisic acid metabolic process1.78E-03
77GO:0071486: cellular response to high light intensity1.78E-03
78GO:1903830: magnesium ion transmembrane transport1.78E-03
79GO:0009765: photosynthesis, light harvesting1.78E-03
80GO:0010363: regulation of plant-type hypersensitive response1.78E-03
81GO:0022622: root system development1.78E-03
82GO:0010107: potassium ion import1.78E-03
83GO:2000038: regulation of stomatal complex development1.78E-03
84GO:0010508: positive regulation of autophagy1.78E-03
85GO:0000304: response to singlet oxygen2.27E-03
86GO:0009626: plant-type hypersensitive response2.43E-03
87GO:0061025: membrane fusion2.47E-03
88GO:0009620: response to fungus2.53E-03
89GO:0010942: positive regulation of cell death2.80E-03
90GO:0006751: glutathione catabolic process2.80E-03
91GO:0070814: hydrogen sulfide biosynthetic process2.80E-03
92GO:1902456: regulation of stomatal opening2.80E-03
93GO:1900425: negative regulation of defense response to bacterium2.80E-03
94GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione2.80E-03
95GO:0010555: response to mannitol3.36E-03
96GO:2000037: regulation of stomatal complex patterning3.36E-03
97GO:0010310: regulation of hydrogen peroxide metabolic process3.36E-03
98GO:2000067: regulation of root morphogenesis3.36E-03
99GO:0000911: cytokinesis by cell plate formation3.36E-03
100GO:0009612: response to mechanical stimulus3.36E-03
101GO:0009942: longitudinal axis specification3.36E-03
102GO:0051607: defense response to virus3.85E-03
103GO:0050832: defense response to fungus3.91E-03
104GO:0015693: magnesium ion transport3.97E-03
105GO:0010044: response to aluminum ion3.97E-03
106GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway3.97E-03
107GO:0070370: cellular heat acclimation3.97E-03
108GO:0015937: coenzyme A biosynthetic process3.97E-03
109GO:0009788: negative regulation of abscisic acid-activated signaling pathway4.32E-03
110GO:0009627: systemic acquired resistance4.56E-03
111GO:0009790: embryo development4.59E-03
112GO:0010492: maintenance of shoot apical meristem identity4.60E-03
113GO:0043068: positive regulation of programmed cell death4.60E-03
114GO:0030162: regulation of proteolysis4.60E-03
115GO:0010078: maintenance of root meristem identity4.60E-03
116GO:0009737: response to abscisic acid5.25E-03
117GO:0043562: cellular response to nitrogen levels5.27E-03
118GO:0006002: fructose 6-phosphate metabolic process5.27E-03
119GO:0009880: embryonic pattern specification5.27E-03
120GO:0007186: G-protein coupled receptor signaling pathway5.27E-03
121GO:0008219: cell death5.32E-03
122GO:0090333: regulation of stomatal closure5.98E-03
123GO:0048527: lateral root development6.15E-03
124GO:0010119: regulation of stomatal movement6.15E-03
125GO:0009409: response to cold6.22E-03
126GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process6.56E-03
127GO:0008202: steroid metabolic process6.71E-03
128GO:0042761: very long-chain fatty acid biosynthetic process6.71E-03
129GO:0048268: clathrin coat assembly6.71E-03
130GO:2000280: regulation of root development6.71E-03
131GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway6.71E-03
132GO:0006470: protein dephosphorylation6.74E-03
133GO:0009617: response to bacterium7.12E-03
134GO:0043069: negative regulation of programmed cell death7.47E-03
135GO:0019538: protein metabolic process7.47E-03
136GO:0000103: sulfate assimilation7.47E-03
137GO:0006897: endocytosis8.02E-03
138GO:0009750: response to fructose8.27E-03
139GO:0030148: sphingolipid biosynthetic process8.27E-03
140GO:0010072: primary shoot apical meristem specification8.27E-03
141GO:0072593: reactive oxygen species metabolic process8.27E-03
142GO:0012501: programmed cell death9.09E-03
143GO:0010105: negative regulation of ethylene-activated signaling pathway9.09E-03
144GO:0010229: inflorescence development9.94E-03
145GO:0055046: microgametogenesis9.94E-03
146GO:0006807: nitrogen compound metabolic process9.94E-03
147GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.06E-02
148GO:0009887: animal organ morphogenesis1.08E-02
149GO:0034605: cellular response to heat1.08E-02
150GO:0009414: response to water deprivation1.08E-02
151GO:0016567: protein ubiquitination1.13E-02
152GO:0010030: positive regulation of seed germination1.17E-02
153GO:0070588: calcium ion transmembrane transport1.17E-02
154GO:0042343: indole glucosinolate metabolic process1.17E-02
155GO:0009723: response to ethylene1.19E-02
156GO:0009611: response to wounding1.28E-02
157GO:2000377: regulation of reactive oxygen species metabolic process1.36E-02
158GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.36E-02
159GO:0009863: salicylic acid mediated signaling pathway1.36E-02
160GO:0010187: negative regulation of seed germination1.36E-02
161GO:0016192: vesicle-mediated transport1.39E-02
162GO:0048367: shoot system development1.44E-02
163GO:0016575: histone deacetylation1.46E-02
164GO:0098542: defense response to other organism1.56E-02
165GO:0061077: chaperone-mediated protein folding1.56E-02
166GO:0048278: vesicle docking1.56E-02
167GO:0007005: mitochondrion organization1.67E-02
168GO:0009814: defense response, incompatible interaction1.67E-02
169GO:2000022: regulation of jasmonic acid mediated signaling pathway1.67E-02
170GO:0018105: peptidyl-serine phosphorylation1.73E-02
171GO:0010227: floral organ abscission1.77E-02
172GO:0009742: brassinosteroid mediated signaling pathway1.78E-02
173GO:0009306: protein secretion1.88E-02
174GO:0010091: trichome branching1.88E-02
175GO:0009561: megagametogenesis1.88E-02
176GO:0016310: phosphorylation1.96E-02
177GO:0010118: stomatal movement2.11E-02
178GO:0042631: cellular response to water deprivation2.11E-02
179GO:0042391: regulation of membrane potential2.11E-02
180GO:0080022: primary root development2.11E-02
181GO:0071472: cellular response to salt stress2.22E-02
182GO:0010154: fruit development2.22E-02
183GO:0048364: root development2.25E-02
184GO:0048544: recognition of pollen2.34E-02
185GO:0055072: iron ion homeostasis2.46E-02
186GO:0006623: protein targeting to vacuole2.46E-02
187GO:0010183: pollen tube guidance2.46E-02
188GO:0009749: response to glucose2.46E-02
189GO:0071554: cell wall organization or biogenesis2.58E-02
190GO:0002229: defense response to oomycetes2.58E-02
191GO:0000302: response to reactive oxygen species2.58E-02
192GO:0006891: intra-Golgi vesicle-mediated transport2.58E-02
193GO:0010193: response to ozone2.58E-02
194GO:0010583: response to cyclopentenone2.70E-02
195GO:0016032: viral process2.70E-02
196GO:0030163: protein catabolic process2.83E-02
197GO:0010150: leaf senescence2.90E-02
198GO:0009873: ethylene-activated signaling pathway2.94E-02
199GO:0006464: cellular protein modification process2.96E-02
200GO:0071805: potassium ion transmembrane transport3.09E-02
201GO:0000910: cytokinesis3.22E-02
202GO:0009734: auxin-activated signaling pathway3.27E-02
203GO:0001666: response to hypoxia3.35E-02
204GO:0009607: response to biotic stimulus3.49E-02
205GO:0006906: vesicle fusion3.63E-02
206GO:0006950: response to stress3.77E-02
207GO:0048481: plant ovule development4.05E-02
208GO:0006499: N-terminal protein myristoylation4.34E-02
209GO:0015031: protein transport4.96E-02
RankGO TermAdjusted P value
1GO:0003837: beta-ureidopropionase activity0.00E+00
2GO:0033550: MAP kinase tyrosine phosphatase activity0.00E+00
3GO:0005524: ATP binding8.61E-16
4GO:0016301: kinase activity3.10E-12
5GO:0004012: phospholipid-translocating ATPase activity1.46E-08
6GO:0004674: protein serine/threonine kinase activity1.39E-07
7GO:0005515: protein binding4.00E-07
8GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism8.77E-07
9GO:0004672: protein kinase activity8.58E-06
10GO:0004707: MAP kinase activity1.09E-04
11GO:0004714: transmembrane receptor protein tyrosine kinase activity2.45E-04
12GO:0004671: protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity2.60E-04
13GO:0032050: clathrin heavy chain binding2.60E-04
14GO:1901149: salicylic acid binding2.60E-04
15GO:0004713: protein tyrosine kinase activity5.06E-04
16GO:0005516: calmodulin binding5.25E-04
17GO:0004594: pantothenate kinase activity5.74E-04
18GO:0045140: inositol phosphoceramide synthase activity5.74E-04
19GO:0008728: GTP diphosphokinase activity5.74E-04
20GO:0004871: signal transducer activity9.07E-04
21GO:0004383: guanylate cyclase activity9.31E-04
22GO:0004781: sulfate adenylyltransferase (ATP) activity9.31E-04
23GO:0001664: G-protein coupled receptor binding9.31E-04
24GO:0003840: gamma-glutamyltransferase activity9.31E-04
25GO:0031683: G-protein beta/gamma-subunit complex binding9.31E-04
26GO:0036374: glutathione hydrolase activity9.31E-04
27GO:0001653: peptide receptor activity1.33E-03
28GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity1.33E-03
29GO:0004416: hydroxyacylglutathione hydrolase activity1.33E-03
30GO:0033612: receptor serine/threonine kinase binding1.41E-03
31GO:0004301: epoxide hydrolase activity1.78E-03
32GO:0043495: protein anchor1.78E-03
33GO:0000287: magnesium ion binding2.00E-03
34GO:0010294: abscisic acid glucosyltransferase activity2.27E-03
35GO:0030276: clathrin binding2.29E-03
36GO:0008113: peptide-methionine (S)-S-oxide reductase activity3.36E-03
37GO:0102391: decanoate--CoA ligase activity3.36E-03
38GO:0003950: NAD+ ADP-ribosyltransferase activity3.36E-03
39GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity3.64E-03
40GO:0004467: long-chain fatty acid-CoA ligase activity3.97E-03
41GO:0003872: 6-phosphofructokinase activity3.97E-03
42GO:0042803: protein homodimerization activity4.04E-03
43GO:0009931: calcium-dependent protein serine/threonine kinase activity4.56E-03
44GO:0004869: cysteine-type endopeptidase inhibitor activity4.60E-03
45GO:0008565: protein transporter activity4.74E-03
46GO:0004683: calmodulin-dependent protein kinase activity4.80E-03
47GO:0004675: transmembrane receptor protein serine/threonine kinase activity5.20E-03
48GO:0008142: oxysterol binding5.27E-03
49GO:0005267: potassium channel activity5.27E-03
50GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)5.27E-03
51GO:0004712: protein serine/threonine/tyrosine kinase activity7.37E-03
52GO:0005545: 1-phosphatidylinositol binding7.47E-03
53GO:0005484: SNAP receptor activity8.70E-03
54GO:0004521: endoribonuclease activity9.09E-03
55GO:0015095: magnesium ion transmembrane transporter activity9.94E-03
56GO:0005262: calcium channel activity9.94E-03
57GO:0005388: calcium-transporting ATPase activity9.94E-03
58GO:0043531: ADP binding1.11E-02
59GO:0004190: aspartic-type endopeptidase activity1.17E-02
60GO:0030552: cAMP binding1.17E-02
61GO:0030553: cGMP binding1.17E-02
62GO:0004725: protein tyrosine phosphatase activity1.27E-02
63GO:0003954: NADH dehydrogenase activity1.36E-02
64GO:0004407: histone deacetylase activity1.36E-02
65GO:0043130: ubiquitin binding1.36E-02
66GO:0005528: FK506 binding1.36E-02
67GO:0043424: protein histidine kinase binding1.46E-02
68GO:0005216: ion channel activity1.46E-02
69GO:0015079: potassium ion transmembrane transporter activity1.46E-02
70GO:0004722: protein serine/threonine phosphatase activity1.84E-02
71GO:0003727: single-stranded RNA binding1.88E-02
72GO:0030246: carbohydrate binding1.93E-02
73GO:0005249: voltage-gated potassium channel activity2.11E-02
74GO:0030551: cyclic nucleotide binding2.11E-02
75GO:0046873: metal ion transmembrane transporter activity2.22E-02
76GO:0008536: Ran GTPase binding2.22E-02
77GO:0001085: RNA polymerase II transcription factor binding2.22E-02
78GO:0004197: cysteine-type endopeptidase activity2.70E-02
79GO:0005509: calcium ion binding3.13E-02
80GO:0016413: O-acetyltransferase activity3.22E-02
81GO:0016168: chlorophyll binding3.49E-02
82GO:0016887: ATPase activity3.68E-02
83GO:0004806: triglyceride lipase activity3.77E-02
84GO:0046982: protein heterodimerization activity4.39E-02
85GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding4.49E-02
RankGO TermAdjusted P value
1GO:0045335: phagocytic vesicle0.00E+00
2GO:0005886: plasma membrane4.79E-15
3GO:0016021: integral component of membrane2.13E-07
4GO:0070062: extracellular exosome2.55E-05
5GO:0030131: clathrin adaptor complex2.45E-04
6GO:0030125: clathrin vesicle coat5.06E-04
7GO:0031304: intrinsic component of mitochondrial inner membrane5.74E-04
8GO:0005802: trans-Golgi network6.04E-04
9GO:0042406: extrinsic component of endoplasmic reticulum membrane9.31E-04
10GO:0005905: clathrin-coated pit1.41E-03
11GO:0005741: mitochondrial outer membrane1.41E-03
12GO:0005945: 6-phosphofructokinase complex2.27E-03
13GO:0000813: ESCRT I complex2.27E-03
14GO:0000164: protein phosphatase type 1 complex2.27E-03
15GO:0019898: extrinsic component of membrane2.64E-03
16GO:0009504: cell plate2.64E-03
17GO:0000145: exocyst3.02E-03
18GO:0016363: nuclear matrix3.36E-03
19GO:0005778: peroxisomal membrane3.64E-03
20GO:0005829: cytosol4.13E-03
21GO:0005777: peroxisome4.20E-03
22GO:0019005: SCF ubiquitin ligase complex5.32E-03
23GO:0016604: nuclear body6.71E-03
24GO:0030665: clathrin-coated vesicle membrane6.71E-03
25GO:0017119: Golgi transport complex7.47E-03
26GO:0005789: endoplasmic reticulum membrane7.88E-03
27GO:0031902: late endosome membrane8.02E-03
28GO:0005795: Golgi stack1.17E-02
29GO:0005834: heterotrimeric G-protein complex1.48E-02
30GO:0030136: clathrin-coated vesicle1.99E-02
31GO:0009523: photosystem II2.46E-02
32GO:0005783: endoplasmic reticulum2.79E-02
33GO:0005887: integral component of plasma membrane3.13E-02
34GO:0005667: transcription factor complex3.63E-02
35GO:0000786: nucleosome4.64E-02
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Gene type



Gene DE type