Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G18170

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006003: fructose 2,6-bisphosphate metabolic process0.00E+00
2GO:0045860: positive regulation of protein kinase activity0.00E+00
3GO:0090042: tubulin deacetylation0.00E+00
4GO:0019265: glycine biosynthetic process, by transamination of glyoxylate0.00E+00
5GO:0048507: meristem development3.56E-05
6GO:0010480: microsporocyte differentiation5.48E-05
7GO:0031338: regulation of vesicle fusion5.48E-05
8GO:0043609: regulation of carbon utilization5.48E-05
9GO:0010028: xanthophyll cycle5.48E-05
10GO:0015969: guanosine tetraphosphate metabolic process5.48E-05
11GO:0051775: response to redox state5.48E-05
12GO:0016122: xanthophyll metabolic process1.34E-04
13GO:0043617: cellular response to sucrose starvation2.28E-04
14GO:0090630: activation of GTPase activity2.28E-04
15GO:0006000: fructose metabolic process2.28E-04
16GO:0051639: actin filament network formation3.33E-04
17GO:0006107: oxaloacetate metabolic process3.33E-04
18GO:0006734: NADH metabolic process4.45E-04
19GO:0051781: positive regulation of cell division4.45E-04
20GO:0051764: actin crosslink formation4.45E-04
21GO:0015994: chlorophyll metabolic process4.45E-04
22GO:0071805: potassium ion transmembrane transport4.63E-04
23GO:0048497: maintenance of floral organ identity5.66E-04
24GO:0006656: phosphatidylcholine biosynthetic process5.66E-04
25GO:0009913: epidermal cell differentiation6.92E-04
26GO:0042549: photosystem II stabilization6.92E-04
27GO:0000470: maturation of LSU-rRNA6.92E-04
28GO:0009942: longitudinal axis specification8.25E-04
29GO:0048437: floral organ development9.62E-04
30GO:0010492: maintenance of shoot apical meristem identity1.11E-03
31GO:0006002: fructose 6-phosphate metabolic process1.26E-03
32GO:0034765: regulation of ion transmembrane transport1.41E-03
33GO:0006098: pentose-phosphate shunt1.41E-03
34GO:0006535: cysteine biosynthetic process from serine1.75E-03
35GO:0045036: protein targeting to chloroplast1.75E-03
36GO:0048229: gametophyte development1.93E-03
37GO:0009773: photosynthetic electron transport in photosystem I1.93E-03
38GO:0018105: peptidyl-serine phosphorylation2.06E-03
39GO:0006108: malate metabolic process2.30E-03
40GO:0018107: peptidyl-threonine phosphorylation2.30E-03
41GO:0010075: regulation of meristem growth2.30E-03
42GO:0006094: gluconeogenesis2.30E-03
43GO:0009767: photosynthetic electron transport chain2.30E-03
44GO:0010102: lateral root morphogenesis2.30E-03
45GO:0009934: regulation of meristem structural organization2.49E-03
46GO:0009416: response to light stimulus2.91E-03
47GO:0051017: actin filament bundle assembly3.11E-03
48GO:0019344: cysteine biosynthetic process3.11E-03
49GO:0007010: cytoskeleton organization3.11E-03
50GO:0016575: histone deacetylation3.32E-03
51GO:0061077: chaperone-mediated protein folding3.54E-03
52GO:0080092: regulation of pollen tube growth3.77E-03
53GO:0009739: response to gibberellin3.83E-03
54GO:0010051: xylem and phloem pattern formation4.71E-03
55GO:0048653: anther development4.71E-03
56GO:0042391: regulation of membrane potential4.71E-03
57GO:0010305: leaf vascular tissue pattern formation4.96E-03
58GO:0009646: response to absence of light5.22E-03
59GO:0048825: cotyledon development5.48E-03
60GO:0009791: post-embryonic development5.48E-03
61GO:0016032: viral process6.00E-03
62GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway6.76E-03
63GO:0046777: protein autophosphorylation6.99E-03
64GO:0001666: response to hypoxia7.40E-03
65GO:0009816: defense response to bacterium, incompatible interaction7.69E-03
66GO:0009733: response to auxin8.25E-03
67GO:0006468: protein phosphorylation9.21E-03
68GO:0006499: N-terminal protein myristoylation9.54E-03
69GO:0009853: photorespiration1.05E-02
70GO:0008152: metabolic process1.06E-02
71GO:0006099: tricarboxylic acid cycle1.09E-02
72GO:0006631: fatty acid metabolic process1.19E-02
73GO:0005975: carbohydrate metabolic process1.21E-02
74GO:0046686: response to cadmium ion1.25E-02
75GO:0009744: response to sucrose1.26E-02
76GO:0006855: drug transmembrane transport1.40E-02
77GO:0006364: rRNA processing1.55E-02
78GO:0006813: potassium ion transport1.55E-02
79GO:0006096: glycolytic process1.75E-02
80GO:0048316: seed development1.79E-02
81GO:0035556: intracellular signal transduction1.81E-02
82GO:0009845: seed germination2.47E-02
83GO:0009790: embryo development2.61E-02
84GO:0007623: circadian rhythm2.94E-02
85GO:0010228: vegetative to reproductive phase transition of meristem3.04E-02
86GO:0007166: cell surface receptor signaling pathway3.24E-02
87GO:0042254: ribosome biogenesis4.07E-02
88GO:0009723: response to ethylene4.45E-02
RankGO TermAdjusted P value
1GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity0.00E+00
2GO:0052667: phosphomethylethanolamine N-methyltransferase activity0.00E+00
3GO:0003873: 6-phosphofructo-2-kinase activity0.00E+00
4GO:0004676: 3-phosphoinositide-dependent protein kinase activity0.00E+00
5GO:0043014: alpha-tubulin binding0.00E+00
6GO:0050281: serine-glyoxylate transaminase activity0.00E+00
7GO:0046554: malate dehydrogenase (NADP+) activity0.00E+00
8GO:0046422: violaxanthin de-epoxidase activity0.00E+00
9GO:0004561: alpha-N-acetylglucosaminidase activity0.00E+00
10GO:0051721: protein phosphatase 2A binding0.00E+00
11GO:0042903: tubulin deacetylase activity0.00E+00
12GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors0.00E+00
13GO:0004760: serine-pyruvate transaminase activity0.00E+00
14GO:0004856: xylulokinase activity5.48E-05
15GO:0008746: NAD(P)+ transhydrogenase activity5.48E-05
16GO:0030941: chloroplast targeting sequence binding5.48E-05
17GO:0008728: GTP diphosphokinase activity1.34E-04
18GO:0000234: phosphoethanolamine N-methyltransferase activity1.34E-04
19GO:0050017: L-3-cyanoalanine synthase activity1.34E-04
20GO:0003863: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity2.28E-04
21GO:0004148: dihydrolipoyl dehydrogenase activity2.28E-04
22GO:0048487: beta-tubulin binding3.33E-04
23GO:0019201: nucleotide kinase activity3.33E-04
24GO:0051861: glycolipid binding4.45E-04
25GO:0008453: alanine-glyoxylate transaminase activity4.45E-04
26GO:0042802: identical protein binding5.25E-04
27GO:0016773: phosphotransferase activity, alcohol group as acceptor5.66E-04
28GO:0017137: Rab GTPase binding5.66E-04
29GO:0016615: malate dehydrogenase activity6.92E-04
30GO:2001070: starch binding6.92E-04
31GO:0004332: fructose-bisphosphate aldolase activity6.92E-04
32GO:0042578: phosphoric ester hydrolase activity6.92E-04
33GO:0004017: adenylate kinase activity8.25E-04
34GO:0005242: inward rectifier potassium channel activity8.25E-04
35GO:0004124: cysteine synthase activity8.25E-04
36GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity8.25E-04
37GO:0070300: phosphatidic acid binding8.25E-04
38GO:0030060: L-malate dehydrogenase activity8.25E-04
39GO:0043022: ribosome binding1.11E-03
40GO:0004033: aldo-keto reductase (NADP) activity1.11E-03
41GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)1.26E-03
42GO:0016301: kinase activity1.30E-03
43GO:0005089: Rho guanyl-nucleotide exchange factor activity1.93E-03
44GO:0004672: protein kinase activity2.47E-03
45GO:0004407: histone deacetylase activity3.11E-03
46GO:0005528: FK506 binding3.11E-03
47GO:0015079: potassium ion transmembrane transporter activity3.32E-03
48GO:0033612: receptor serine/threonine kinase binding3.54E-03
49GO:0004674: protein serine/threonine kinase activity4.20E-03
50GO:0005524: ATP binding4.30E-03
51GO:0005249: voltage-gated potassium channel activity4.71E-03
52GO:0030551: cyclic nucleotide binding4.71E-03
53GO:0051015: actin filament binding6.27E-03
54GO:0005096: GTPase activator activity9.22E-03
55GO:0015238: drug transmembrane transporter activity9.22E-03
56GO:0050897: cobalt ion binding9.86E-03
57GO:0016491: oxidoreductase activity1.01E-02
58GO:0003746: translation elongation factor activity1.05E-02
59GO:0043621: protein self-association1.33E-02
60GO:0035091: phosphatidylinositol binding1.33E-02
61GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.40E-02
62GO:0016298: lipase activity1.59E-02
63GO:0003777: microtubule motor activity1.67E-02
64GO:0016787: hydrolase activity1.87E-02
65GO:0016874: ligase activity1.91E-02
66GO:0003779: actin binding1.95E-02
67GO:0005515: protein binding2.19E-02
68GO:0019843: rRNA binding2.34E-02
69GO:0030170: pyridoxal phosphate binding2.52E-02
70GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.80E-02
71GO:0005525: GTP binding2.83E-02
72GO:0015297: antiporter activity2.85E-02
73GO:0008017: microtubule binding3.04E-02
74GO:0005509: calcium ion binding3.21E-02
75GO:0016788: hydrolase activity, acting on ester bonds4.07E-02
76GO:0050660: flavin adenine dinucleotide binding4.45E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast1.15E-09
2GO:0009535: chloroplast thylakoid membrane2.77E-07
3GO:0009543: chloroplast thylakoid lumen1.48E-05
4GO:0009344: nitrite reductase complex [NAD(P)H]5.48E-05
5GO:0009579: thylakoid8.58E-05
6GO:0009534: chloroplast thylakoid8.77E-05
7GO:0030095: chloroplast photosystem II9.76E-05
8GO:0009570: chloroplast stroma1.18E-04
9GO:0032432: actin filament bundle3.33E-04
10GO:0031359: integral component of chloroplast outer membrane9.62E-04
11GO:0031977: thylakoid lumen9.88E-04
12GO:0005884: actin filament1.93E-03
13GO:0005759: mitochondrial matrix3.12E-03
14GO:0009654: photosystem II oxygen evolving complex3.32E-03
15GO:0009941: chloroplast envelope3.87E-03
16GO:0019898: extrinsic component of membrane5.48E-03
17GO:0009707: chloroplast outer membrane8.91E-03
18GO:0005886: plasma membrane1.61E-02
19GO:0005747: mitochondrial respiratory chain complex I1.79E-02
20GO:0012505: endomembrane system1.95E-02
21GO:0005777: peroxisome1.97E-02
22GO:0005622: intracellular3.06E-02
23GO:0048046: apoplast3.62E-02
24GO:0005840: ribosome3.65E-02
25GO:0005874: microtubule4.56E-02
26GO:0022625: cytosolic large ribosomal subunit4.85E-02
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Gene type



Gene DE type