GO Enrichment Analysis of Co-expressed Genes with
AT1G18060
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:2000505: regulation of energy homeostasis | 0.00E+00 |
| 2 | GO:0007638: mechanosensory behavior | 0.00E+00 |
| 3 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 4 | GO:0009773: photosynthetic electron transport in photosystem I | 4.94E-12 |
| 5 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 1.29E-06 |
| 6 | GO:0006000: fructose metabolic process | 4.78E-06 |
| 7 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.11E-05 |
| 8 | GO:0019464: glycine decarboxylation via glycine cleavage system | 2.06E-05 |
| 9 | GO:0006546: glycine catabolic process | 2.06E-05 |
| 10 | GO:0015979: photosynthesis | 2.72E-05 |
| 11 | GO:0019252: starch biosynthetic process | 1.06E-04 |
| 12 | GO:0006810: transport | 1.23E-04 |
| 13 | GO:0006002: fructose 6-phosphate metabolic process | 1.50E-04 |
| 14 | GO:0071482: cellular response to light stimulus | 1.50E-04 |
| 15 | GO:0000481: maturation of 5S rRNA | 1.62E-04 |
| 16 | GO:0071461: cellular response to redox state | 1.62E-04 |
| 17 | GO:2000021: regulation of ion homeostasis | 1.62E-04 |
| 18 | GO:0034337: RNA folding | 1.62E-04 |
| 19 | GO:0006824: cobalt ion transport | 1.62E-04 |
| 20 | GO:0043266: regulation of potassium ion transport | 1.62E-04 |
| 21 | GO:0006898: receptor-mediated endocytosis | 3.69E-04 |
| 22 | GO:0034755: iron ion transmembrane transport | 3.69E-04 |
| 23 | GO:0080005: photosystem stoichiometry adjustment | 3.69E-04 |
| 24 | GO:1900871: chloroplast mRNA modification | 3.69E-04 |
| 25 | GO:0006094: gluconeogenesis | 3.96E-04 |
| 26 | GO:0005986: sucrose biosynthetic process | 3.96E-04 |
| 27 | GO:0019253: reductive pentose-phosphate cycle | 4.47E-04 |
| 28 | GO:0000280: nuclear division | 6.04E-04 |
| 29 | GO:0006518: peptide metabolic process | 6.04E-04 |
| 30 | GO:0016045: detection of bacterium | 6.04E-04 |
| 31 | GO:0010359: regulation of anion channel activity | 6.04E-04 |
| 32 | GO:2001141: regulation of RNA biosynthetic process | 8.63E-04 |
| 33 | GO:0046836: glycolipid transport | 8.63E-04 |
| 34 | GO:0007231: osmosensory signaling pathway | 8.63E-04 |
| 35 | GO:0009152: purine ribonucleotide biosynthetic process | 8.63E-04 |
| 36 | GO:0046653: tetrahydrofolate metabolic process | 8.63E-04 |
| 37 | GO:1901332: negative regulation of lateral root development | 8.63E-04 |
| 38 | GO:0010021: amylopectin biosynthetic process | 1.14E-03 |
| 39 | GO:0010037: response to carbon dioxide | 1.14E-03 |
| 40 | GO:0015976: carbon utilization | 1.14E-03 |
| 41 | GO:0045727: positive regulation of translation | 1.14E-03 |
| 42 | GO:0015994: chlorophyll metabolic process | 1.14E-03 |
| 43 | GO:2000122: negative regulation of stomatal complex development | 1.14E-03 |
| 44 | GO:0033500: carbohydrate homeostasis | 1.14E-03 |
| 45 | GO:0016120: carotene biosynthetic process | 1.45E-03 |
| 46 | GO:0008152: metabolic process | 2.15E-03 |
| 47 | GO:0015995: chlorophyll biosynthetic process | 2.47E-03 |
| 48 | GO:0009772: photosynthetic electron transport in photosystem II | 2.52E-03 |
| 49 | GO:0010196: nonphotochemical quenching | 2.52E-03 |
| 50 | GO:0005978: glycogen biosynthetic process | 2.91E-03 |
| 51 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 2.91E-03 |
| 52 | GO:0009704: de-etiolation | 2.91E-03 |
| 53 | GO:0032508: DNA duplex unwinding | 2.91E-03 |
| 54 | GO:0032544: plastid translation | 3.33E-03 |
| 55 | GO:0009853: photorespiration | 3.46E-03 |
| 56 | GO:0010206: photosystem II repair | 3.77E-03 |
| 57 | GO:0006816: calcium ion transport | 5.19E-03 |
| 58 | GO:0052544: defense response by callose deposition in cell wall | 5.19E-03 |
| 59 | GO:0006352: DNA-templated transcription, initiation | 5.19E-03 |
| 60 | GO:0009409: response to cold | 5.89E-03 |
| 61 | GO:0010207: photosystem II assembly | 6.76E-03 |
| 62 | GO:0045454: cell redox homeostasis | 6.96E-03 |
| 63 | GO:0070588: calcium ion transmembrane transport | 7.32E-03 |
| 64 | GO:0005985: sucrose metabolic process | 7.32E-03 |
| 65 | GO:0032259: methylation | 8.60E-03 |
| 66 | GO:0009768: photosynthesis, light harvesting in photosystem I | 9.09E-03 |
| 67 | GO:0061077: chaperone-mediated protein folding | 9.72E-03 |
| 68 | GO:0035428: hexose transmembrane transport | 1.04E-02 |
| 69 | GO:0042742: defense response to bacterium | 1.29E-02 |
| 70 | GO:0046323: glucose import | 1.38E-02 |
| 71 | GO:1901657: glycosyl compound metabolic process | 1.75E-02 |
| 72 | GO:0010027: thylakoid membrane organization | 2.07E-02 |
| 73 | GO:0009658: chloroplast organization | 2.29E-02 |
| 74 | GO:0018298: protein-chromophore linkage | 2.51E-02 |
| 75 | GO:0009817: defense response to fungus, incompatible interaction | 2.51E-02 |
| 76 | GO:0010311: lateral root formation | 2.60E-02 |
| 77 | GO:0010218: response to far red light | 2.69E-02 |
| 78 | GO:0007568: aging | 2.78E-02 |
| 79 | GO:0010119: regulation of stomatal movement | 2.78E-02 |
| 80 | GO:0009637: response to blue light | 2.97E-02 |
| 81 | GO:0016051: carbohydrate biosynthetic process | 2.97E-02 |
| 82 | GO:0010114: response to red light | 3.55E-02 |
| 83 | GO:0042538: hyperosmotic salinity response | 4.18E-02 |
| 84 | GO:0006364: rRNA processing | 4.39E-02 |
| 85 | GO:0006417: regulation of translation | 4.72E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 2 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 3 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 4 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 5 | GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity | 0.00E+00 |
| 6 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 1.29E-06 |
| 7 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 1.11E-05 |
| 8 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 2.06E-05 |
| 9 | GO:0004017: adenylate kinase activity | 6.99E-05 |
| 10 | GO:0047746: chlorophyllase activity | 3.69E-04 |
| 11 | GO:0016868: intramolecular transferase activity, phosphotransferases | 3.69E-04 |
| 12 | GO:0004047: aminomethyltransferase activity | 3.69E-04 |
| 13 | GO:0033201: alpha-1,4-glucan synthase activity | 3.69E-04 |
| 14 | GO:0018708: thiol S-methyltransferase activity | 3.69E-04 |
| 15 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 6.04E-04 |
| 16 | GO:0008864: formyltetrahydrofolate deformylase activity | 6.04E-04 |
| 17 | GO:0004373: glycogen (starch) synthase activity | 6.04E-04 |
| 18 | GO:0005528: FK506 binding | 6.16E-04 |
| 19 | GO:0017089: glycolipid transporter activity | 8.63E-04 |
| 20 | GO:0019201: nucleotide kinase activity | 8.63E-04 |
| 21 | GO:0016851: magnesium chelatase activity | 8.63E-04 |
| 22 | GO:0001053: plastid sigma factor activity | 1.14E-03 |
| 23 | GO:0051861: glycolipid binding | 1.14E-03 |
| 24 | GO:0016987: sigma factor activity | 1.14E-03 |
| 25 | GO:0009011: starch synthase activity | 1.14E-03 |
| 26 | GO:0008878: glucose-1-phosphate adenylyltransferase activity | 1.14E-03 |
| 27 | GO:0016787: hydrolase activity | 1.20E-03 |
| 28 | GO:0048038: quinone binding | 1.47E-03 |
| 29 | GO:0042578: phosphoric ester hydrolase activity | 1.78E-03 |
| 30 | GO:0051920: peroxiredoxin activity | 2.14E-03 |
| 31 | GO:0016209: antioxidant activity | 2.91E-03 |
| 32 | GO:0004033: aldo-keto reductase (NADP) activity | 2.91E-03 |
| 33 | GO:0005381: iron ion transmembrane transporter activity | 4.22E-03 |
| 34 | GO:0047372: acylglycerol lipase activity | 5.19E-03 |
| 35 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 5.19E-03 |
| 36 | GO:0015386: potassium:proton antiporter activity | 5.19E-03 |
| 37 | GO:0004089: carbonate dehydratase activity | 6.22E-03 |
| 38 | GO:0031072: heat shock protein binding | 6.22E-03 |
| 39 | GO:0005262: calcium channel activity | 6.22E-03 |
| 40 | GO:0004022: alcohol dehydrogenase (NAD) activity | 6.22E-03 |
| 41 | GO:0008266: poly(U) RNA binding | 6.76E-03 |
| 42 | GO:0031409: pigment binding | 7.90E-03 |
| 43 | GO:0015079: potassium ion transmembrane transporter activity | 9.09E-03 |
| 44 | GO:0004176: ATP-dependent peptidase activity | 9.72E-03 |
| 45 | GO:0009055: electron carrier activity | 9.93E-03 |
| 46 | GO:0005509: calcium ion binding | 1.14E-02 |
| 47 | GO:0003756: protein disulfide isomerase activity | 1.17E-02 |
| 48 | GO:0005355: glucose transmembrane transporter activity | 1.45E-02 |
| 49 | GO:0050662: coenzyme binding | 1.45E-02 |
| 50 | GO:0008483: transaminase activity | 1.91E-02 |
| 51 | GO:0016168: chlorophyll binding | 2.16E-02 |
| 52 | GO:0008168: methyltransferase activity | 2.21E-02 |
| 53 | GO:0102483: scopolin beta-glucosidase activity | 2.33E-02 |
| 54 | GO:0004721: phosphoprotein phosphatase activity | 2.33E-02 |
| 55 | GO:0004222: metalloendopeptidase activity | 2.69E-02 |
| 56 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 2.78E-02 |
| 57 | GO:0008422: beta-glucosidase activity | 3.16E-02 |
| 58 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.76E-02 |
| 59 | GO:0005198: structural molecule activity | 3.86E-02 |
| 60 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.39E-02 |
| 61 | GO:0003690: double-stranded DNA binding | 4.50E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0098572: stromal side of plastid thylakoid membrane | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 7.48E-39 |
| 3 | GO:0009534: chloroplast thylakoid | 1.26E-30 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 8.84E-25 |
| 5 | GO:0009941: chloroplast envelope | 1.91E-24 |
| 6 | GO:0009570: chloroplast stroma | 7.11E-18 |
| 7 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 7.57E-13 |
| 8 | GO:0009579: thylakoid | 5.92E-07 |
| 9 | GO:0009543: chloroplast thylakoid lumen | 1.11E-06 |
| 10 | GO:0005960: glycine cleavage complex | 1.11E-05 |
| 11 | GO:0010287: plastoglobule | 1.77E-05 |
| 12 | GO:0031969: chloroplast membrane | 1.91E-05 |
| 13 | GO:0009654: photosystem II oxygen evolving complex | 3.38E-05 |
| 14 | GO:0019898: extrinsic component of membrane | 1.06E-04 |
| 15 | GO:0030095: chloroplast photosystem II | 4.47E-04 |
| 16 | GO:0031977: thylakoid lumen | 4.88E-04 |
| 17 | GO:0010007: magnesium chelatase complex | 6.04E-04 |
| 18 | GO:0042651: thylakoid membrane | 6.78E-04 |
| 19 | GO:0009706: chloroplast inner membrane | 1.21E-03 |
| 20 | GO:0010319: stromule | 1.88E-03 |
| 21 | GO:0009501: amyloplast | 2.91E-03 |
| 22 | GO:0042644: chloroplast nucleoid | 3.77E-03 |
| 23 | GO:0048046: apoplast | 3.82E-03 |
| 24 | GO:0032040: small-subunit processome | 5.69E-03 |
| 25 | GO:0009508: plastid chromosome | 6.22E-03 |
| 26 | GO:0030076: light-harvesting complex | 7.32E-03 |
| 27 | GO:0009522: photosystem I | 1.45E-02 |
| 28 | GO:0009295: nucleoid | 1.91E-02 |
| 29 | GO:0016021: integral component of membrane | 4.03E-02 |