Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G16470

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006592: ornithine biosynthetic process0.00E+00
2GO:0080053: response to phenylalanine0.00E+00
3GO:0002376: immune system process0.00E+00
4GO:0043201: response to leucine0.00E+00
5GO:0039694: viral RNA genome replication0.00E+00
6GO:0030149: sphingolipid catabolic process0.00E+00
7GO:0006983: ER overload response0.00E+00
8GO:0080052: response to histidine0.00E+00
9GO:0033542: fatty acid beta-oxidation, unsaturated, even number0.00E+00
10GO:0034976: response to endoplasmic reticulum stress1.45E-09
11GO:0046686: response to cadmium ion5.00E-09
12GO:0006099: tricarboxylic acid cycle3.67E-08
13GO:0006457: protein folding1.22E-07
14GO:0006102: isocitrate metabolic process1.24E-07
15GO:0045454: cell redox homeostasis8.90E-07
16GO:0006979: response to oxidative stress1.35E-06
17GO:0006101: citrate metabolic process5.13E-06
18GO:0006511: ubiquitin-dependent protein catabolic process9.95E-06
19GO:0009306: protein secretion1.55E-05
20GO:0072334: UDP-galactose transmembrane transport4.01E-05
21GO:0042742: defense response to bacterium4.76E-05
22GO:0010150: leaf senescence5.46E-05
23GO:0009627: systemic acquired resistance9.72E-05
24GO:0006097: glyoxylate cycle1.12E-04
25GO:0009697: salicylic acid biosynthetic process1.12E-04
26GO:0006564: L-serine biosynthetic process1.12E-04
27GO:0000162: tryptophan biosynthetic process1.20E-04
28GO:0006014: D-ribose metabolic process1.62E-04
29GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly1.62E-04
30GO:0030433: ubiquitin-dependent ERAD pathway2.12E-04
31GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response2.20E-04
32GO:0019276: UDP-N-acetylgalactosamine metabolic process3.37E-04
33GO:0080120: CAAX-box protein maturation3.37E-04
34GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine3.37E-04
35GO:0035266: meristem growth3.37E-04
36GO:0071586: CAAX-box protein processing3.37E-04
37GO:0007292: female gamete generation3.37E-04
38GO:0006047: UDP-N-acetylglucosamine metabolic process3.37E-04
39GO:1990641: response to iron ion starvation3.37E-04
40GO:0009700: indole phytoalexin biosynthetic process3.37E-04
41GO:0043266: regulation of potassium ion transport3.37E-04
42GO:0043687: post-translational protein modification3.37E-04
43GO:0010230: alternative respiration3.37E-04
44GO:0019673: GDP-mannose metabolic process3.37E-04
45GO:0051775: response to redox state3.37E-04
46GO:0046244: salicylic acid catabolic process3.37E-04
47GO:0010266: response to vitamin B13.37E-04
48GO:0030091: protein repair3.60E-04
49GO:0006605: protein targeting3.60E-04
50GO:0030968: endoplasmic reticulum unfolded protein response4.41E-04
51GO:0000302: response to reactive oxygen species4.85E-04
52GO:0051262: protein tetramerization7.34E-04
53GO:0043066: negative regulation of apoptotic process7.34E-04
54GO:0019752: carboxylic acid metabolic process7.34E-04
55GO:0042939: tripeptide transport7.34E-04
56GO:0051788: response to misfolded protein7.34E-04
57GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine7.34E-04
58GO:0007154: cell communication7.34E-04
59GO:0008535: respiratory chain complex IV assembly7.34E-04
60GO:0006011: UDP-glucose metabolic process1.19E-03
61GO:0060968: regulation of gene silencing1.19E-03
62GO:0006048: UDP-N-acetylglucosamine biosynthetic process1.19E-03
63GO:0032940: secretion by cell1.19E-03
64GO:0042351: 'de novo' GDP-L-fucose biosynthetic process1.19E-03
65GO:0090351: seedling development1.36E-03
66GO:0010116: positive regulation of abscisic acid biosynthetic process1.71E-03
67GO:0002239: response to oomycetes1.71E-03
68GO:0033014: tetrapyrrole biosynthetic process1.71E-03
69GO:0009651: response to salt stress1.97E-03
70GO:0031348: negative regulation of defense response2.23E-03
71GO:0009751: response to salicylic acid2.29E-03
72GO:0080037: negative regulation of cytokinin-activated signaling pathway2.30E-03
73GO:0070534: protein K63-linked ubiquitination2.30E-03
74GO:0051365: cellular response to potassium ion starvation2.30E-03
75GO:0010387: COP9 signalosome assembly2.30E-03
76GO:0042938: dipeptide transport2.30E-03
77GO:0009625: response to insect2.43E-03
78GO:0009617: response to bacterium2.48E-03
79GO:0006465: signal peptide processing2.93E-03
80GO:0000304: response to singlet oxygen2.93E-03
81GO:2000762: regulation of phenylpropanoid metabolic process2.93E-03
82GO:0018279: protein N-linked glycosylation via asparagine2.93E-03
83GO:0006486: protein glycosylation2.93E-03
84GO:0046283: anthocyanin-containing compound metabolic process2.93E-03
85GO:0051603: proteolysis involved in cellular protein catabolic process3.06E-03
86GO:0000413: protein peptidyl-prolyl isomerization3.10E-03
87GO:0010405: arabinogalactan protein metabolic process3.63E-03
88GO:0006301: postreplication repair3.63E-03
89GO:0048827: phyllome development3.63E-03
90GO:0048232: male gamete generation3.63E-03
91GO:0006096: glycolytic process3.63E-03
92GO:0043248: proteasome assembly3.63E-03
93GO:0047484: regulation of response to osmotic stress3.63E-03
94GO:0042176: regulation of protein catabolic process3.63E-03
95GO:0018258: protein O-linked glycosylation via hydroxyproline3.63E-03
96GO:0002238: response to molecule of fungal origin3.63E-03
97GO:0019252: starch biosynthetic process3.85E-03
98GO:0015031: protein transport3.95E-03
99GO:0010555: response to mannitol4.37E-03
100GO:0015977: carbon fixation4.37E-03
101GO:0042372: phylloquinone biosynthetic process4.37E-03
102GO:0009553: embryo sac development4.43E-03
103GO:0009409: response to cold4.53E-03
104GO:1900056: negative regulation of leaf senescence5.15E-03
105GO:0000338: protein deneddylation5.15E-03
106GO:1902074: response to salt5.15E-03
107GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline5.99E-03
108GO:0009819: drought recovery5.99E-03
109GO:0010078: maintenance of root meristem identity5.99E-03
110GO:0030162: regulation of proteolysis5.99E-03
111GO:0006875: cellular metal ion homeostasis5.99E-03
112GO:0055075: potassium ion homeostasis5.99E-03
113GO:0010120: camalexin biosynthetic process6.87E-03
114GO:0006526: arginine biosynthetic process6.87E-03
115GO:0010204: defense response signaling pathway, resistance gene-independent6.87E-03
116GO:0009414: response to water deprivation6.95E-03
117GO:0006886: intracellular protein transport7.05E-03
118GO:0006952: defense response7.73E-03
119GO:0015780: nucleotide-sugar transport7.79E-03
120GO:0046685: response to arsenic-containing substance7.79E-03
121GO:0006783: heme biosynthetic process7.79E-03
122GO:0010112: regulation of systemic acquired resistance7.79E-03
123GO:0009407: toxin catabolic process8.59E-03
124GO:0010205: photoinhibition8.75E-03
125GO:0043067: regulation of programmed cell death8.75E-03
126GO:0048354: mucilage biosynthetic process involved in seed coat development8.75E-03
127GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway8.75E-03
128GO:0010043: response to zinc ion9.01E-03
129GO:0043069: negative regulation of programmed cell death9.76E-03
130GO:0048829: root cap development9.76E-03
131GO:0045087: innate immune response9.89E-03
132GO:0016051: carbohydrate biosynthetic process9.89E-03
133GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process1.07E-02
134GO:0010015: root morphogenesis1.08E-02
135GO:0000038: very long-chain fatty acid metabolic process1.08E-02
136GO:0009089: lysine biosynthetic process via diaminopimelate1.08E-02
137GO:0052544: defense response by callose deposition in cell wall1.08E-02
138GO:0009807: lignan biosynthetic process1.08E-02
139GO:0006790: sulfur compound metabolic process1.19E-02
140GO:0016925: protein sumoylation1.19E-02
141GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.19E-02
142GO:0009737: response to abscisic acid1.20E-02
143GO:0042542: response to hydrogen peroxide1.23E-02
144GO:0018107: peptidyl-threonine phosphorylation1.30E-02
145GO:0010075: regulation of meristem growth1.30E-02
146GO:0006094: gluconeogenesis1.30E-02
147GO:0009934: regulation of meristem structural organization1.42E-02
148GO:0009933: meristem structural organization1.42E-02
149GO:0010053: root epidermal cell differentiation1.54E-02
150GO:0007030: Golgi organization1.54E-02
151GO:0010039: response to iron ion1.54E-02
152GO:0046854: phosphatidylinositol phosphorylation1.54E-02
153GO:0009846: pollen germination1.61E-02
154GO:0006487: protein N-linked glycosylation1.79E-02
155GO:0080147: root hair cell development1.79E-02
156GO:2000377: regulation of reactive oxygen species metabolic process1.79E-02
157GO:0009735: response to cytokinin1.92E-02
158GO:0048316: seed development2.11E-02
159GO:0071456: cellular response to hypoxia2.19E-02
160GO:0019748: secondary metabolic process2.19E-02
161GO:0010200: response to chitin2.21E-02
162GO:0016192: vesicle-mediated transport2.25E-02
163GO:0006012: galactose metabolic process2.33E-02
164GO:0010584: pollen exine formation2.47E-02
165GO:0019722: calcium-mediated signaling2.47E-02
166GO:0018105: peptidyl-serine phosphorylation2.53E-02
167GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.62E-02
168GO:0042147: retrograde transport, endosome to Golgi2.62E-02
169GO:0010118: stomatal movement2.77E-02
170GO:0042631: cellular response to water deprivation2.77E-02
171GO:0010501: RNA secondary structure unwinding2.77E-02
172GO:0006520: cellular amino acid metabolic process2.92E-02
173GO:0010154: fruit development2.92E-02
174GO:0006662: glycerol ether metabolic process2.92E-02
175GO:0010197: polar nucleus fusion2.92E-02
176GO:0048868: pollen tube development2.92E-02
177GO:0009646: response to absence of light3.07E-02
178GO:0009851: auxin biosynthetic process3.23E-02
179GO:0032259: methylation3.26E-02
180GO:0002229: defense response to oomycetes3.39E-02
181GO:0006891: intra-Golgi vesicle-mediated transport3.39E-02
182GO:0010193: response to ozone3.39E-02
183GO:0009408: response to heat3.44E-02
184GO:0009630: gravitropism3.55E-02
185GO:0009790: embryo development3.59E-02
186GO:0030163: protein catabolic process3.72E-02
187GO:0009753: response to jasmonic acid3.75E-02
188GO:0009567: double fertilization forming a zygote and endosperm3.88E-02
189GO:0009607: response to biotic stimulus4.58E-02
190GO:0009816: defense response to bacterium, incompatible interaction4.58E-02
191GO:0015995: chlorophyll biosynthetic process4.94E-02
192GO:0006950: response to stress4.94E-02
RankGO TermAdjusted P value
1GO:0008117: sphinganine-1-phosphate aldolase activity0.00E+00
2GO:0004164: diphthine synthase activity0.00E+00
3GO:0050220: prostaglandin-E synthase activity0.00E+00
4GO:0016312: inositol bisphosphate phosphatase activity0.00E+00
5GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
6GO:0003980: UDP-glucose:glycoprotein glucosyltransferase activity0.00E+00
7GO:0008777: acetylornithine deacetylase activity0.00E+00
8GO:0004298: threonine-type endopeptidase activity2.26E-07
9GO:0003756: protein disulfide isomerase activity4.79E-07
10GO:0008233: peptidase activity4.40E-06
11GO:0003994: aconitate hydratase activity5.13E-06
12GO:0004449: isocitrate dehydrogenase (NAD+) activity4.01E-05
13GO:0005459: UDP-galactose transmembrane transporter activity1.12E-04
14GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity1.12E-04
15GO:0036402: proteasome-activating ATPase activity1.62E-04
16GO:0005509: calcium ion binding1.63E-04
17GO:0033743: peptide-methionine (R)-S-oxide reductase activity2.20E-04
18GO:0004747: ribokinase activity2.20E-04
19GO:0004602: glutathione peroxidase activity2.20E-04
20GO:0008320: protein transmembrane transporter activity2.86E-04
21GO:0005507: copper ion binding3.03E-04
22GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity3.37E-04
23GO:0052630: UDP-N-acetylgalactosamine diphosphorylase activity3.37E-04
24GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity3.37E-04
25GO:0004425: indole-3-glycerol-phosphate synthase activity3.37E-04
26GO:0033984: indole-3-glycerol-phosphate lyase activity3.37E-04
27GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity3.37E-04
28GO:0008446: GDP-mannose 4,6-dehydratase activity3.37E-04
29GO:0004048: anthranilate phosphoribosyltransferase activity3.37E-04
30GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity3.37E-04
31GO:0008909: isochorismate synthase activity3.37E-04
32GO:0004325: ferrochelatase activity3.37E-04
33GO:0003977: UDP-N-acetylglucosamine diphosphorylase activity3.37E-04
34GO:0010285: L,L-diaminopimelate aminotransferase activity3.37E-04
35GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity3.37E-04
36GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity3.37E-04
37GO:0008865: fructokinase activity3.60E-04
38GO:0004743: pyruvate kinase activity6.25E-04
39GO:0030955: potassium ion binding6.25E-04
40GO:0004617: phosphoglycerate dehydrogenase activity7.34E-04
41GO:0004775: succinate-CoA ligase (ADP-forming) activity7.34E-04
42GO:0004338: glucan exo-1,3-beta-glucosidase activity7.34E-04
43GO:0042937: tripeptide transporter activity7.34E-04
44GO:0004776: succinate-CoA ligase (GDP-forming) activity7.34E-04
45GO:0051082: unfolded protein binding8.28E-04
46GO:0015035: protein disulfide oxidoreductase activity8.65E-04
47GO:0000030: mannosyltransferase activity1.19E-03
48GO:0008430: selenium binding1.19E-03
49GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity1.19E-03
50GO:0008964: phosphoenolpyruvate carboxylase activity1.19E-03
51GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity1.19E-03
52GO:0017025: TBP-class protein binding1.36E-03
53GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity1.71E-03
54GO:0005460: UDP-glucose transmembrane transporter activity1.71E-03
55GO:0004364: glutathione transferase activity1.91E-03
56GO:0004834: tryptophan synthase activity2.30E-03
57GO:0042936: dipeptide transporter activity2.30E-03
58GO:0004576: oligosaccharyl transferase activity2.30E-03
59GO:0051287: NAD binding2.56E-03
60GO:0015301: anion:anion antiporter activity2.93E-03
61GO:0005452: inorganic anion exchanger activity2.93E-03
62GO:0005496: steroid binding2.93E-03
63GO:0016853: isomerase activity3.59E-03
64GO:0030976: thiamine pyrophosphate binding3.63E-03
65GO:1990714: hydroxyproline O-galactosyltransferase activity3.63E-03
66GO:0008113: peptide-methionine (S)-S-oxide reductase activity4.37E-03
67GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity4.37E-03
68GO:0004656: procollagen-proline 4-dioxygenase activity4.37E-03
69GO:0016746: transferase activity, transferring acyl groups4.77E-03
70GO:0016831: carboxy-lyase activity5.15E-03
71GO:0005338: nucleotide-sugar transmembrane transporter activity5.15E-03
72GO:0043295: glutathione binding5.15E-03
73GO:0016758: transferase activity, transferring hexosyl groups5.92E-03
74GO:0004034: aldose 1-epimerase activity5.99E-03
75GO:0008135: translation factor activity, RNA binding6.87E-03
76GO:0030247: polysaccharide binding7.03E-03
77GO:0071949: FAD binding7.79E-03
78GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity7.79E-03
79GO:0004222: metalloendopeptidase activity8.59E-03
80GO:0045309: protein phosphorylated amino acid binding8.75E-03
81GO:0016301: kinase activity9.40E-03
82GO:0030234: enzyme regulator activity9.76E-03
83GO:0008171: O-methyltransferase activity9.76E-03
84GO:0003746: translation elongation factor activity9.89E-03
85GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors9.89E-03
86GO:0030246: carbohydrate binding1.08E-02
87GO:0019904: protein domain specific binding1.08E-02
88GO:0004129: cytochrome-c oxidase activity1.08E-02
89GO:0008794: arsenate reductase (glutaredoxin) activity1.08E-02
90GO:0051539: 4 iron, 4 sulfur cluster binding1.13E-02
91GO:0008378: galactosyltransferase activity1.19E-02
92GO:0009982: pseudouridine synthase activity1.30E-02
93GO:0004175: endopeptidase activity1.42E-02
94GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.42E-02
95GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.49E-02
96GO:0005525: GTP binding1.53E-02
97GO:0004190: aspartic-type endopeptidase activity1.54E-02
98GO:0000287: magnesium ion binding1.57E-02
99GO:0005524: ATP binding1.73E-02
100GO:0016887: ATPase activity1.79E-02
101GO:0031625: ubiquitin protein ligase binding1.91E-02
102GO:0016779: nucleotidyltransferase activity2.19E-02
103GO:0008810: cellulase activity2.33E-02
104GO:0047134: protein-disulfide reductase activity2.62E-02
105GO:0004791: thioredoxin-disulfide reductase activity3.07E-02
106GO:0030170: pyridoxal phosphate binding3.42E-02
107GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor3.72E-02
108GO:0009055: electron carrier activity3.75E-02
109GO:0015297: antiporter activity4.05E-02
110GO:0008483: transaminase activity4.05E-02
111GO:0008237: metallopeptidase activity4.05E-02
112GO:0016597: amino acid binding4.23E-02
113GO:0051213: dioxygenase activity4.40E-02
114GO:0009931: calcium-dependent protein serine/threonine kinase activity4.76E-02
115GO:0004683: calmodulin-dependent protein kinase activity4.94E-02
116GO:0004004: ATP-dependent RNA helicase activity4.94E-02
RankGO TermAdjusted P value
1GO:0019034: viral replication complex0.00E+00
2GO:0000327: lytic vacuole within protein storage vacuole0.00E+00
3GO:0005783: endoplasmic reticulum2.42E-22
4GO:0005788: endoplasmic reticulum lumen3.00E-12
5GO:0005829: cytosol2.17E-09
6GO:0000502: proteasome complex1.02E-08
7GO:0005839: proteasome core complex2.26E-07
8GO:0005886: plasma membrane4.32E-06
9GO:0030134: ER to Golgi transport vesicle5.13E-06
10GO:0005773: vacuole5.15E-05
11GO:0008250: oligosaccharyltransferase complex1.12E-04
12GO:0005789: endoplasmic reticulum membrane2.06E-04
13GO:0030173: integral component of Golgi membrane2.20E-04
14GO:0031597: cytosolic proteasome complex2.20E-04
15GO:0031595: nuclear proteasome complex2.86E-04
16GO:0005774: vacuolar membrane2.95E-04
17GO:0045252: oxoglutarate dehydrogenase complex3.37E-04
18GO:0005787: signal peptidase complex3.37E-04
19GO:0019773: proteasome core complex, alpha-subunit complex4.41E-04
20GO:0009507: chloroplast5.11E-04
21GO:0031090: organelle membrane5.29E-04
22GO:0031901: early endosome membrane5.29E-04
23GO:0008540: proteasome regulatory particle, base subcomplex6.25E-04
24GO:0005794: Golgi apparatus6.33E-04
25GO:0016021: integral component of membrane1.10E-03
26GO:0030176: integral component of endoplasmic reticulum membrane1.36E-03
27GO:0031372: UBC13-MMS2 complex2.30E-03
28GO:0030660: Golgi-associated vesicle membrane2.30E-03
29GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane2.30E-03
30GO:0048046: apoplast2.46E-03
31GO:0005746: mitochondrial respiratory chain2.93E-03
32GO:0032588: trans-Golgi network membrane3.63E-03
33GO:0009536: plastid3.65E-03
34GO:0009505: plant-type cell wall3.83E-03
35GO:0009506: plasmodesma4.29E-03
36GO:0005762: mitochondrial large ribosomal subunit4.37E-03
37GO:0005801: cis-Golgi network4.37E-03
38GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane5.99E-03
39GO:0005623: cell6.33E-03
40GO:0000326: protein storage vacuole6.87E-03
41GO:0008180: COP9 signalosome7.79E-03
42GO:0016020: membrane7.83E-03
43GO:0005740: mitochondrial envelope9.76E-03
44GO:0005765: lysosomal membrane1.08E-02
45GO:0008541: proteasome regulatory particle, lid subcomplex1.08E-02
46GO:0043234: protein complex1.66E-02
47GO:0005618: cell wall1.87E-02
48GO:0031969: chloroplast membrane2.11E-02
49GO:0009570: chloroplast stroma2.65E-02
50GO:0005739: mitochondrion3.12E-02
51GO:0016592: mediator complex3.55E-02
52GO:0032580: Golgi cisterna membrane3.88E-02
53GO:0005737: cytoplasm3.88E-02
54GO:0005778: peroxisomal membrane4.05E-02
55GO:0005802: trans-Golgi network4.36E-02
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Gene type



Gene DE type