co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G16180

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032780: negative regulation of ATPase activity	0.00E+00
2	GO:0010111: glyoxysome organization	0.00E+00
3	GO:1901799: negative regulation of proteasomal protein catabolic process	0.00E+00
4	GO:0006212: uracil catabolic process	6.45E-07
5	GO:0019483: beta-alanine biosynthetic process	6.45E-07
6	GO:0006635: fatty acid beta-oxidation	5.45E-05
7	GO:0006605: protein targeting	6.75E-05
8	GO:0006914: autophagy	7.31E-05
9	GO:0043562: cellular response to nitrogen levels	8.55E-05
10	GO:0098710: guanine import across plasma membrane	1.12E-04
11	GO:0019628: urate catabolic process	1.12E-04
12	GO:0000303: response to superoxide	1.12E-04
13	GO:0080173: male-female gamete recognition during double fertilization	1.12E-04
14	GO:0006481: C-terminal protein methylation	1.12E-04
15	GO:0035344: hypoxanthine transport	1.12E-04
16	GO:0034214: protein hexamerization	1.12E-04
17	GO:0010265: SCF complex assembly	1.12E-04
18	GO:0098721: uracil import across plasma membrane	1.12E-04
19	GO:0006144: purine nucleobase metabolic process	1.12E-04
20	GO:0010201: response to continuous far red light stimulus by the high-irradiance response system	1.12E-04
21	GO:0098702: adenine import across plasma membrane	1.12E-04
22	GO:0006511: ubiquitin-dependent protein catabolic process	1.28E-04
23	GO:0010608: posttranscriptional regulation of gene expression	2.61E-04
24	GO:1905182: positive regulation of urease activity	2.61E-04
25	GO:0019521: D-gluconate metabolic process	2.61E-04
26	GO:0051258: protein polymerization	2.61E-04
27	GO:1902000: homogentisate catabolic process	2.61E-04
28	GO:0042325: regulation of phosphorylation	2.61E-04
29	GO:0019395: fatty acid oxidation	2.61E-04
30	GO:0031648: protein destabilization	2.61E-04
31	GO:2000377: regulation of reactive oxygen species metabolic process	3.73E-04
32	GO:0051603: proteolysis involved in cellular protein catabolic process	4.31E-04
33	GO:0009072: aromatic amino acid family metabolic process	4.32E-04
34	GO:1900055: regulation of leaf senescence	4.32E-04
35	GO:0010359: regulation of anion channel activity	4.32E-04
36	GO:0043617: cellular response to sucrose starvation	4.32E-04
37	GO:0030433: ubiquitin-dependent ERAD pathway	4.96E-04
38	GO:0031348: negative regulation of defense response	4.96E-04
39	GO:0015031: protein transport	5.13E-04
40	GO:0006809: nitric oxide biosynthetic process	6.19E-04
41	GO:0071786: endoplasmic reticulum tubular network organization	6.19E-04
42	GO:0006624: vacuolar protein processing	6.19E-04
43	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	6.33E-04
44	GO:0010363: regulation of plant-type hypersensitive response	8.23E-04
45	GO:0042991: transcription factor import into nucleus	8.23E-04
46	GO:0006878: cellular copper ion homeostasis	8.23E-04
47	GO:0016094: polyprenol biosynthetic process	1.04E-03
48	GO:0006464: cellular protein modification process	1.08E-03
49	GO:0009873: ethylene-activated signaling pathway	1.25E-03
50	GO:0070814: hydrogen sulfide biosynthetic process	1.27E-03
51	GO:0010358: leaf shaping	1.27E-03
52	GO:1902456: regulation of stomatal opening	1.27E-03
53	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	1.27E-03
54	GO:0006950: response to stress	1.49E-03
55	GO:0000911: cytokinesis by cell plate formation	1.52E-03
56	GO:0009610: response to symbiotic fungus	1.78E-03
57	GO:0006955: immune response	1.78E-03
58	GO:0046470: phosphatidylcholine metabolic process	1.78E-03
59	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	1.78E-03
60	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	1.78E-03
61	GO:0006333: chromatin assembly or disassembly	1.78E-03
62	GO:0010038: response to metal ion	1.78E-03
63	GO:0010119: regulation of stomatal movement	1.91E-03
64	GO:0009738: abscisic acid-activated signaling pathway	1.92E-03
65	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	2.06E-03
66	GO:0006102: isocitrate metabolic process	2.06E-03
67	GO:0009867: jasmonic acid mediated signaling pathway	2.08E-03
68	GO:0006099: tricarboxylic acid cycle	2.18E-03
69	GO:0006631: fatty acid metabolic process	2.47E-03
70	GO:0009723: response to ethylene	2.63E-03
71	GO:0006098: pentose-phosphate shunt	2.66E-03
72	GO:0090332: stomatal closure	2.97E-03
73	GO:0010629: negative regulation of gene expression	3.30E-03
74	GO:0019538: protein metabolic process	3.30E-03
75	GO:0000103: sulfate assimilation	3.30E-03
76	GO:0043085: positive regulation of catalytic activity	3.65E-03
77	GO:0012501: programmed cell death	4.00E-03
78	GO:0071365: cellular response to auxin stimulus	4.00E-03
79	GO:0010102: lateral root morphogenesis	4.36E-03
80	GO:0006807: nitrogen compound metabolic process	4.36E-03
81	GO:0007034: vacuolar transport	4.74E-03
82	GO:0007031: peroxisome organization	5.13E-03
83	GO:0009825: multidimensional cell growth	5.13E-03
84	GO:0009695: jasmonic acid biosynthetic process	6.35E-03
85	GO:0031408: oxylipin biosynthetic process	6.78E-03
86	GO:0009790: embryo development	7.44E-03
87	GO:0010150: leaf senescence	8.80E-03
88	GO:0010087: phloem or xylem histogenesis	9.08E-03
89	GO:0010197: polar nucleus fusion	9.57E-03
90	GO:0009646: response to absence of light	1.01E-02
91	GO:0006470: protein dephosphorylation	1.01E-02
92	GO:0042752: regulation of circadian rhythm	1.01E-02
93	GO:0006623: protein targeting to vacuole	1.06E-02
94	GO:0048825: cotyledon development	1.06E-02
95	GO:0010193: response to ozone	1.11E-02
96	GO:0046686: response to cadmium ion	1.15E-02
97	GO:0010583: response to cyclopentenone	1.16E-02
98	GO:0016032: viral process	1.16E-02
99	GO:0030163: protein catabolic process	1.22E-02
100	GO:0051607: defense response to virus	1.38E-02
101	GO:0016579: protein deubiquitination	1.38E-02
102	GO:0006970: response to osmotic stress	1.47E-02
103	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	1.50E-02
104	GO:0009816: defense response to bacterium, incompatible interaction	1.50E-02
105	GO:0007049: cell cycle	1.53E-02
106	GO:0048366: leaf development	1.61E-02
107	GO:0009737: response to abscisic acid	1.85E-02
108	GO:0006499: N-terminal protein myristoylation	1.86E-02
109	GO:0009407: toxin catabolic process	1.86E-02
110	GO:0007568: aging	1.93E-02
111	GO:0010043: response to zinc ion	1.93E-02
112	GO:0055114: oxidation-reduction process	2.29E-02
113	GO:0016042: lipid catabolic process	2.43E-02
114	GO:0009744: response to sucrose	2.46E-02
115	GO:0006629: lipid metabolic process	2.51E-02
116	GO:0009753: response to jasmonic acid	2.69E-02
117	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	2.82E-02
118	GO:0009846: pollen germination	2.89E-02
119	GO:0042538: hyperosmotic salinity response	2.89E-02
120	GO:0009809: lignin biosynthetic process	3.04E-02
121	GO:0006486: protein glycosylation	3.04E-02
122	GO:0009736: cytokinin-activated signaling pathway	3.04E-02
123	GO:0016567: protein ubiquitination	3.12E-02
124	GO:0006508: proteolysis	3.17E-02
125	GO:0006417: regulation of translation	3.27E-02
126	GO:0048367: shoot system development	3.51E-02
127	GO:0009734: auxin-activated signaling pathway	3.52E-02
128	GO:0009651: response to salt stress	3.60E-02
129	GO:0018105: peptidyl-serine phosphorylation	3.99E-02
130	GO:0000398: mRNA splicing, via spliceosome	4.33E-02
131	GO:0009611: response to wounding	4.52E-02
132	GO:0035556: intracellular signal transduction	4.67E-02
133	GO:0009845: seed germination	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0017113: dihydropyrimidine dehydrogenase (NADP+) activity	0.00E+00
2	GO:0033550: MAP kinase tyrosine phosphatase activity	0.00E+00
3	GO:0004846: urate oxidase activity	0.00E+00
4	GO:0016508: long-chain-enoyl-CoA hydratase activity	0.00E+00
5	GO:0004157: dihydropyrimidinase activity	0.00E+00
6	GO:0042030: ATPase inhibitor activity	0.00E+00
7	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
8	GO:0004301: epoxide hydrolase activity	1.09E-05
9	GO:0008692: 3-hydroxybutyryl-CoA epimerase activity	1.12E-04
10	GO:0015208: guanine transmembrane transporter activity	1.12E-04
11	GO:0015294: solute:cation symporter activity	1.12E-04
12	GO:0019786: Atg8-specific protease activity	1.12E-04
13	GO:0015207: adenine transmembrane transporter activity	1.12E-04
14	GO:0019707: protein-cysteine S-acyltransferase activity	1.12E-04
15	GO:0004671: protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity	1.12E-04
16	GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity	2.61E-04
17	GO:0019779: Atg8 activating enzyme activity	2.61E-04
18	GO:0003988: acetyl-CoA C-acyltransferase activity	2.61E-04
19	GO:0004450: isocitrate dehydrogenase (NADP+) activity	2.61E-04
20	GO:0004175: endopeptidase activity	2.68E-04
21	GO:0003863: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity	4.32E-04
22	GO:0016151: nickel cation binding	4.32E-04
23	GO:0005047: signal recognition particle binding	4.32E-04
24	GO:0004781: sulfate adenylyltransferase (ATP) activity	4.32E-04
25	GO:0005515: protein binding	5.93E-04
26	GO:0004108: citrate (Si)-synthase activity	6.19E-04
27	GO:0030527: structural constituent of chromatin	6.19E-04
28	GO:0004165: dodecenoyl-CoA delta-isomerase activity	6.19E-04
29	GO:0004300: enoyl-CoA hydratase activity	6.19E-04
30	GO:0015210: uracil transmembrane transporter activity	8.23E-04
31	GO:0019776: Atg8 ligase activity	8.23E-04
32	GO:0003924: GTPase activity	8.54E-04
33	GO:0004197: cysteine-type endopeptidase activity	9.56E-04
34	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	1.04E-03
35	GO:0002094: polyprenyltransferase activity	1.04E-03
36	GO:0031386: protein tag	1.04E-03
37	GO:0031593: polyubiquitin binding	1.27E-03
38	GO:0047714: galactolipase activity	1.27E-03
39	GO:0036402: proteasome-activating ATPase activity	1.27E-03
40	GO:0102391: decanoate--CoA ligase activity	1.52E-03
41	GO:0003950: NAD+ ADP-ribosyltransferase activity	1.52E-03
42	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	1.52E-03
43	GO:0004656: procollagen-proline 4-dioxygenase activity	1.52E-03
44	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	1.52E-03
45	GO:0004620: phospholipase activity	1.78E-03
46	GO:0004467: long-chain fatty acid-CoA ligase activity	1.78E-03
47	GO:0004869: cysteine-type endopeptidase inhibitor activity	2.06E-03
48	GO:0052747: sinapyl alcohol dehydrogenase activity	2.06E-03
49	GO:0004630: phospholipase D activity	2.35E-03
50	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	2.35E-03
51	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	2.35E-03
52	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	2.66E-03
53	GO:0045309: protein phosphorylated amino acid binding	2.97E-03
54	GO:0019904: protein domain specific binding	3.65E-03
55	GO:0008234: cysteine-type peptidase activity	3.97E-03
56	GO:0045551: cinnamyl-alcohol dehydrogenase activity	4.00E-03
57	GO:0005525: GTP binding	4.30E-03
58	GO:0019888: protein phosphatase regulator activity	4.36E-03
59	GO:0017025: TBP-class protein binding	5.13E-03
60	GO:0004190: aspartic-type endopeptidase activity	5.13E-03
61	GO:0016787: hydrolase activity	5.29E-03
62	GO:0004725: protein tyrosine phosphatase activity	5.52E-03
63	GO:0031418: L-ascorbic acid binding	5.93E-03
64	GO:0043130: ubiquitin binding	5.93E-03
65	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	6.78E-03
66	GO:0004298: threonine-type endopeptidase activity	6.78E-03
67	GO:0019706: protein-cysteine S-palmitoyltransferase activity	6.78E-03
68	GO:0016887: ATPase activity	8.21E-03
69	GO:0004843: thiol-dependent ubiquitin-specific protease activity	1.11E-02
70	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.56E-02
71	GO:0004806: triglyceride lipase activity	1.62E-02
72	GO:0004683: calmodulin-dependent protein kinase activity	1.62E-02
73	GO:0005096: GTPase activator activity	1.80E-02
74	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.06E-02
75	GO:0042803: protein homodimerization activity	2.13E-02
76	GO:0005509: calcium ion binding	2.15E-02
77	GO:0004722: protein serine/threonine phosphatase activity	2.23E-02
78	GO:0004364: glutathione transferase activity	2.39E-02
79	GO:0005198: structural molecule activity	2.67E-02
80	GO:0051287: NAD binding	2.82E-02
81	GO:0031625: ubiquitin protein ligase binding	3.27E-02
82	GO:0004842: ubiquitin-protein transferase activity	3.56E-02
83	GO:0022857: transmembrane transporter activity	3.75E-02

Rank	GO Term	Adjusted P value
1	GO:0005785: signal recognition particle receptor complex	0.00E+00
2	GO:0019822: P4 peroxisome	0.00E+00
3	GO:0030139: endocytic vesicle	2.44E-06
4	GO:0005829: cytosol	5.74E-06
5	GO:0000323: lytic vacuole	5.76E-06
6	GO:0005777: peroxisome	9.64E-06
7	GO:0005783: endoplasmic reticulum	3.58E-05
8	GO:0005773: vacuole	6.05E-05
9	GO:0009514: glyoxysome	8.55E-05
10	GO:0031972: chloroplast intermembrane space	1.12E-04
11	GO:0000138: Golgi trans cisterna	1.12E-04
12	GO:0005769: early endosome	3.37E-04
13	GO:0000502: proteasome complex	4.12E-04
14	GO:0005737: cytoplasm	5.46E-04
15	GO:0005886: plasma membrane	5.49E-04
16	GO:0005775: vacuolar lumen	6.19E-04
17	GO:0032585: multivesicular body membrane	6.19E-04
18	GO:0071782: endoplasmic reticulum tubular network	6.19E-04
19	GO:0031461: cullin-RING ubiquitin ligase complex	6.19E-04
20	GO:0030136: clathrin-coated vesicle	6.33E-04
21	GO:0005789: endoplasmic reticulum membrane	7.42E-04
22	GO:0005776: autophagosome	8.23E-04
23	GO:0000164: protein phosphatase type 1 complex	1.04E-03
24	GO:0016363: nuclear matrix	1.52E-03
25	GO:0031597: cytosolic proteasome complex	1.52E-03
26	GO:0000794: condensed nuclear chromosome	1.78E-03
27	GO:0031595: nuclear proteasome complex	1.78E-03
28	GO:0000421: autophagosome membrane	2.06E-03
29	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	2.06E-03
30	GO:0005819: spindle	2.27E-03
31	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	2.35E-03
32	GO:0005794: Golgi apparatus	2.37E-03
33	GO:0031902: late endosome membrane	2.47E-03
34	GO:0031901: early endosome membrane	2.66E-03
35	GO:0030665: clathrin-coated vesicle membrane	2.97E-03
36	GO:0008540: proteasome regulatory particle, base subcomplex	2.97E-03
37	GO:0017119: Golgi transport complex	3.30E-03
38	GO:0005635: nuclear envelope	3.84E-03
39	GO:0005764: lysosome	4.74E-03
40	GO:0005768: endosome	5.02E-03
41	GO:0009524: phragmoplast	6.72E-03
42	GO:0005839: proteasome core complex	6.78E-03
43	GO:0031410: cytoplasmic vesicle	7.22E-03
44	GO:0005615: extracellular space	9.85E-03
45	GO:0000785: chromatin	1.16E-02
46	GO:0000151: ubiquitin ligase complex	1.74E-02
47	GO:0005802: trans-Golgi network	1.77E-02
48	GO:0009506: plasmodesma	1.96E-02
49	GO:0031966: mitochondrial membrane	2.89E-02
50	GO:0009507: chloroplast	2.99E-02
51	GO:0009570: chloroplast stroma	3.58E-02
52	GO:0012505: endomembrane system	3.83E-02
53	GO:0005730: nucleolus	4.56E-02
54	GO:0005623: cell	4.68E-02