co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G14840

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006780: uroporphyrinogen III biosynthetic process	0.00E+00
2	GO:0006428: isoleucyl-tRNA aminoacylation	0.00E+00
3	GO:0035970: peptidyl-threonine dephosphorylation	0.00E+00
4	GO:0015805: S-adenosyl-L-methionine transport	0.00E+00
5	GO:0010480: microsporocyte differentiation	1.10E-04
6	GO:0031338: regulation of vesicle fusion	1.10E-04
7	GO:1902448: positive regulation of shade avoidance	4.25E-04
8	GO:0043617: cellular response to sucrose starvation	4.25E-04
9	GO:0090630: activation of GTPase activity	4.25E-04
10	GO:2001295: malonyl-CoA biosynthetic process	4.25E-04
11	GO:0009226: nucleotide-sugar biosynthetic process	6.10E-04
12	GO:0006085: acetyl-CoA biosynthetic process	8.10E-04
13	GO:0015846: polyamine transport	8.10E-04
14	GO:0031122: cytoplasmic microtubule organization	8.10E-04
15	GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway	8.10E-04
16	GO:0000304: response to singlet oxygen	1.02E-03
17	GO:0006633: fatty acid biosynthetic process	1.10E-03
18	GO:0006796: phosphate-containing compound metabolic process	1.25E-03
19	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	1.25E-03
20	GO:0010027: thylakoid membrane organization	1.25E-03
21	GO:0010304: PSII associated light-harvesting complex II catabolic process	1.25E-03
22	GO:0006751: glutathione catabolic process	1.25E-03
23	GO:0042549: photosystem II stabilization	1.25E-03
24	GO:0015995: chlorophyll biosynthetic process	1.46E-03
25	GO:0009942: longitudinal axis specification	1.49E-03
26	GO:0048437: floral organ development	1.75E-03
27	GO:0008610: lipid biosynthetic process	2.03E-03
28	GO:0009657: plastid organization	2.32E-03
29	GO:0006526: arginine biosynthetic process	2.32E-03
30	GO:0071482: cellular response to light stimulus	2.32E-03
31	GO:0015996: chlorophyll catabolic process	2.32E-03
32	GO:0048507: meristem development	2.62E-03
33	GO:0010206: photosystem II repair	2.62E-03
34	GO:0006779: porphyrin-containing compound biosynthetic process	2.93E-03
35	GO:1900865: chloroplast RNA modification	2.93E-03
36	GO:0006782: protoporphyrinogen IX biosynthetic process	3.25E-03
37	GO:0019538: protein metabolic process	3.25E-03
38	GO:0045036: protein targeting to chloroplast	3.25E-03
39	GO:0006415: translational termination	3.59E-03
40	GO:1903507: negative regulation of nucleic acid-templated transcription	3.59E-03
41	GO:0048229: gametophyte development	3.59E-03
42	GO:0012501: programmed cell death	3.93E-03
43	GO:0006820: anion transport	3.93E-03
44	GO:0010102: lateral root morphogenesis	4.30E-03
45	GO:0010075: regulation of meristem growth	4.30E-03
46	GO:0009767: photosynthetic electron transport chain	4.30E-03
47	GO:0009934: regulation of meristem structural organization	4.66E-03
48	GO:0042545: cell wall modification	4.83E-03
49	GO:0006418: tRNA aminoacylation for protein translation	6.25E-03
50	GO:0061077: chaperone-mediated protein folding	6.67E-03
51	GO:0031408: oxylipin biosynthetic process	6.67E-03
52	GO:2000022: regulation of jasmonic acid mediated signaling pathway	7.11E-03
53	GO:0009306: protein secretion	8.00E-03
54	GO:0045490: pectin catabolic process	8.60E-03
55	GO:0010051: xylem and phloem pattern formation	8.93E-03
56	GO:0048653: anther development	8.93E-03
57	GO:0010305: leaf vascular tissue pattern formation	9.41E-03
58	GO:0006520: cellular amino acid metabolic process	9.41E-03
59	GO:0048868: pollen tube development	9.41E-03
60	GO:0009646: response to absence of light	9.91E-03
61	GO:0009791: post-embryonic development	1.04E-02
62	GO:0005975: carbohydrate metabolic process	1.07E-02
63	GO:0080156: mitochondrial mRNA modification	1.09E-02
64	GO:0071554: cell wall organization or biogenesis	1.09E-02
65	GO:0046686: response to cadmium ion	1.11E-02
66	GO:0030163: protein catabolic process	1.20E-02
67	GO:1901657: glycosyl compound metabolic process	1.20E-02
68	GO:0071805: potassium ion transmembrane transport	1.30E-02
69	GO:0016126: sterol biosynthetic process	1.42E-02
70	GO:0009816: defense response to bacterium, incompatible interaction	1.47E-02
71	GO:0048481: plant ovule development	1.71E-02
72	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.71E-02
73	GO:0046777: protein autophosphorylation	1.77E-02
74	GO:0006811: ion transport	1.83E-02
75	GO:0009407: toxin catabolic process	1.83E-02
76	GO:0006839: mitochondrial transport	2.22E-02
77	GO:0016042: lipid catabolic process	2.38E-02
78	GO:0009744: response to sucrose	2.42E-02
79	GO:0009636: response to toxic substance	2.63E-02
80	GO:0009733: response to auxin	2.67E-02
81	GO:0008152: metabolic process	2.70E-02
82	GO:0031347: regulation of defense response	2.77E-02
83	GO:0006364: rRNA processing	2.99E-02
84	GO:0006813: potassium ion transport	2.99E-02
85	GO:0006508: proteolysis	3.06E-02
86	GO:0051603: proteolysis involved in cellular protein catabolic process	3.07E-02
87	GO:0006096: glycolytic process	3.37E-02
88	GO:0006810: transport	3.73E-02
89	GO:0006396: RNA processing	3.93E-02
90	GO:0009416: response to light stimulus	4.33E-02

Rank	GO Term	Adjusted P value
1	GO:0004822: isoleucine-tRNA ligase activity	0.00E+00
2	GO:0019808: polyamine binding	0.00E+00
3	GO:0004852: uroporphyrinogen-III synthase activity	0.00E+00
4	GO:0102193: protein-ribulosamine 3-kinase activity	0.00E+00
5	GO:0005528: FK506 binding	1.19E-05
6	GO:0003867: 4-aminobutyrate transaminase activity	1.10E-04
7	GO:0008568: microtubule-severing ATPase activity	1.10E-04
8	GO:0034256: chlorophyll(ide) b reductase activity	1.10E-04
9	GO:0004163: diphosphomevalonate decarboxylase activity	1.10E-04
10	GO:0030941: chloroplast targeting sequence binding	1.10E-04
11	GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity	1.10E-04
12	GO:0046912: transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	1.10E-04
13	GO:0015929: hexosaminidase activity	2.57E-04
14	GO:0004563: beta-N-acetylhexosaminidase activity	2.57E-04
15	GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	2.57E-04
16	GO:0004802: transketolase activity	2.57E-04
17	GO:0003839: gamma-glutamylcyclotransferase activity	2.57E-04
18	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	2.57E-04
19	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.32E-04
20	GO:0002161: aminoacyl-tRNA editing activity	4.25E-04
21	GO:0004075: biotin carboxylase activity	4.25E-04
22	GO:0030267: glyoxylate reductase (NADP) activity	4.25E-04
23	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	4.25E-04
24	GO:0003863: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity	4.25E-04
25	GO:0016149: translation release factor activity, codon specific	6.10E-04
26	GO:0001872: (1->3)-beta-D-glucan binding	6.10E-04
27	GO:0003878: ATP citrate synthase activity	6.10E-04
28	GO:0016836: hydro-lyase activity	8.10E-04
29	GO:0051861: glycolipid binding	8.10E-04
30	GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity	8.10E-04
31	GO:0017137: Rab GTPase binding	1.02E-03
32	GO:0003989: acetyl-CoA carboxylase activity	1.02E-03
33	GO:0008381: mechanically-gated ion channel activity	1.02E-03
34	GO:0042578: phosphoric ester hydrolase activity	1.25E-03
35	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	1.49E-03
36	GO:0015631: tubulin binding	1.49E-03
37	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	1.49E-03
38	GO:0004427: inorganic diphosphatase activity	1.75E-03
39	GO:0043022: ribosome binding	2.03E-03
40	GO:0003747: translation release factor activity	2.62E-03
41	GO:0045330: aspartyl esterase activity	3.88E-03
42	GO:0000049: tRNA binding	3.93E-03
43	GO:0004565: beta-galactosidase activity	4.30E-03
44	GO:0030599: pectinesterase activity	4.69E-03
45	GO:0004190: aspartic-type endopeptidase activity	5.04E-03
46	GO:0003714: transcription corepressor activity	5.84E-03
47	GO:0015079: potassium ion transmembrane transporter activity	6.25E-03
48	GO:0004707: MAP kinase activity	6.67E-03
49	GO:0033612: receptor serine/threonine kinase binding	6.67E-03
50	GO:0019706: protein-cysteine S-palmitoyltransferase activity	6.67E-03
51	GO:0004252: serine-type endopeptidase activity	6.91E-03
52	GO:0004812: aminoacyl-tRNA ligase activity	8.46E-03
53	GO:0042802: identical protein binding	1.09E-02
54	GO:0016301: kinase activity	1.25E-02
55	GO:0016788: hydrolase activity, acting on ester bonds	1.36E-02
56	GO:0016413: O-acetyltransferase activity	1.36E-02
57	GO:0102483: scopolin beta-glucosidase activity	1.59E-02
58	GO:0030247: polysaccharide binding	1.59E-02
59	GO:0004721: phosphoprotein phosphatase activity	1.59E-02
60	GO:0008233: peptidase activity	1.63E-02
61	GO:0008236: serine-type peptidase activity	1.65E-02
62	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.71E-02
63	GO:0005096: GTPase activator activity	1.77E-02
64	GO:0052689: carboxylic ester hydrolase activity	1.83E-02
65	GO:0004871: signal transducer activity	2.08E-02
66	GO:0004674: protein serine/threonine kinase activity	2.13E-02
67	GO:0008422: beta-glucosidase activity	2.15E-02
68	GO:0004364: glutathione transferase activity	2.35E-02
69	GO:0004185: serine-type carboxypeptidase activity	2.42E-02
70	GO:0051287: NAD binding	2.77E-02
71	GO:0005524: ATP binding	3.22E-02
72	GO:0016491: oxidoreductase activity	3.26E-02
73	GO:0016829: lyase activity	4.77E-02

Rank	GO Term	Adjusted P value
1	GO:0042597: periplasmic space	0.00E+00
2	GO:0009507: chloroplast	3.75E-11
3	GO:0009543: chloroplast thylakoid lumen	2.09E-07
4	GO:0009535: chloroplast thylakoid membrane	1.34E-05
5	GO:0009344: nitrite reductase complex [NAD(P)H]	1.10E-04
6	GO:0009570: chloroplast stroma	1.16E-04
7	GO:0009534: chloroplast thylakoid	5.42E-04
8	GO:0009346: citrate lyase complex	6.10E-04
9	GO:0009941: chloroplast envelope	6.16E-04
10	GO:0031359: integral component of chloroplast outer membrane	1.75E-03
11	GO:0009505: plant-type cell wall	1.98E-03
12	GO:0031977: thylakoid lumen	2.41E-03
13	GO:0009579: thylakoid	2.56E-03
14	GO:0030095: chloroplast photosystem II	4.66E-03
15	GO:0030659: cytoplasmic vesicle membrane	4.66E-03
16	GO:0043234: protein complex	5.44E-03
17	GO:0009654: photosystem II oxygen evolving complex	6.25E-03
18	GO:0009506: plasmodesma	7.18E-03
19	GO:0019898: extrinsic component of membrane	1.04E-02
20	GO:0046658: anchored component of plasma membrane	1.14E-02
21	GO:0005886: plasma membrane	1.24E-02
22	GO:0005618: cell wall	1.47E-02
23	GO:0031969: chloroplast membrane	1.66E-02
24	GO:0009707: chloroplast outer membrane	1.71E-02
25	GO:0012505: endomembrane system	3.77E-02
26	GO:0010287: plastoglobule	4.34E-02
27	GO:0005777: peroxisome	4.95E-02