Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G14280

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0007638: mechanosensory behavior0.00E+00
2GO:0042493: response to drug0.00E+00
3GO:0061157: mRNA destabilization0.00E+00
4GO:2000505: regulation of energy homeostasis0.00E+00
5GO:0019323: pentose catabolic process0.00E+00
6GO:1901918: negative regulation of exoribonuclease activity0.00E+00
7GO:0033494: ferulate metabolic process0.00E+00
8GO:2000121: regulation of removal of superoxide radicals0.00E+00
9GO:0009773: photosynthetic electron transport in photosystem I3.01E-09
10GO:0015979: photosynthesis4.87E-09
11GO:0015995: chlorophyll biosynthetic process4.64E-06
12GO:0034220: ion transmembrane transport8.31E-06
13GO:0006833: water transport3.09E-05
14GO:0010411: xyloglucan metabolic process6.18E-05
15GO:0010206: photosystem II repair8.93E-05
16GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly1.17E-04
17GO:0080170: hydrogen peroxide transmembrane transport1.17E-04
18GO:0006810: transport1.33E-04
19GO:0006546: glycine catabolic process1.99E-04
20GO:0006633: fatty acid biosynthetic process3.82E-04
21GO:0007017: microtubule-based process5.59E-04
22GO:0043266: regulation of potassium ion transport6.25E-04
23GO:0071370: cellular response to gibberellin stimulus6.25E-04
24GO:0046520: sphingoid biosynthetic process6.25E-04
25GO:0000481: maturation of 5S rRNA6.25E-04
26GO:0006824: cobalt ion transport6.25E-04
27GO:0080051: cutin transport6.25E-04
28GO:0033206: meiotic cytokinesis6.25E-04
29GO:2000021: regulation of ion homeostasis6.25E-04
30GO:0034337: RNA folding6.25E-04
31GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway6.25E-04
32GO:0071588: hydrogen peroxide mediated signaling pathway6.25E-04
33GO:0010729: positive regulation of hydrogen peroxide biosynthetic process6.25E-04
34GO:0060627: regulation of vesicle-mediated transport6.25E-04
35GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process6.25E-04
36GO:0044262: cellular carbohydrate metabolic process6.25E-04
37GO:0010218: response to far red light6.89E-04
38GO:0010196: nonphotochemical quenching7.14E-04
39GO:0009645: response to low light intensity stimulus7.14E-04
40GO:0009735: response to cytokinin1.03E-03
41GO:0042254: ribosome biogenesis1.16E-03
42GO:0009958: positive gravitropism1.18E-03
43GO:0042546: cell wall biogenesis1.33E-03
44GO:0010541: acropetal auxin transport1.34E-03
45GO:0015908: fatty acid transport1.34E-03
46GO:0034755: iron ion transmembrane transport1.34E-03
47GO:0001736: establishment of planar polarity1.34E-03
48GO:0006695: cholesterol biosynthetic process1.34E-03
49GO:0006013: mannose metabolic process2.21E-03
50GO:0010160: formation of animal organ boundary2.21E-03
51GO:0045493: xylan catabolic process2.21E-03
52GO:2001295: malonyl-CoA biosynthetic process2.21E-03
53GO:0090391: granum assembly2.21E-03
54GO:0006518: peptide metabolic process2.21E-03
55GO:0071555: cell wall organization2.58E-03
56GO:0010143: cutin biosynthetic process3.05E-03
57GO:0010207: photosystem II assembly3.05E-03
58GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity3.22E-03
59GO:0051513: regulation of monopolar cell growth3.22E-03
60GO:0007231: osmosensory signaling pathway3.22E-03
61GO:0071484: cellular response to light intensity3.22E-03
62GO:0051639: actin filament network formation3.22E-03
63GO:0034059: response to anoxia3.22E-03
64GO:0009052: pentose-phosphate shunt, non-oxidative branch3.22E-03
65GO:0009650: UV protection3.22E-03
66GO:0010306: rhamnogalacturonan II biosynthetic process3.22E-03
67GO:0043481: anthocyanin accumulation in tissues in response to UV light3.22E-03
68GO:0010731: protein glutathionylation3.22E-03
69GO:1901332: negative regulation of lateral root development3.22E-03
70GO:0009624: response to nematode3.41E-03
71GO:0018298: protein-chromophore linkage3.51E-03
72GO:0016042: lipid catabolic process3.53E-03
73GO:0009416: response to light stimulus3.90E-03
74GO:0010037: response to carbon dioxide4.34E-03
75GO:0006808: regulation of nitrogen utilization4.34E-03
76GO:0010222: stem vascular tissue pattern formation4.34E-03
77GO:0015976: carbon utilization4.34E-03
78GO:0051764: actin crosslink formation4.34E-03
79GO:0019464: glycine decarboxylation via glycine cleavage system4.34E-03
80GO:0009765: photosynthesis, light harvesting4.34E-03
81GO:0006085: acetyl-CoA biosynthetic process4.34E-03
82GO:0006183: GTP biosynthetic process4.34E-03
83GO:2000122: negative regulation of stomatal complex development4.34E-03
84GO:0045727: positive regulation of translation4.34E-03
85GO:0030104: water homeostasis4.34E-03
86GO:0033500: carbohydrate homeostasis4.34E-03
87GO:0015994: chlorophyll metabolic process4.34E-03
88GO:0009768: photosynthesis, light harvesting in photosystem I4.68E-03
89GO:0009723: response to ethylene5.45E-03
90GO:0010117: photoprotection5.58E-03
91GO:0016120: carotene biosynthetic process5.58E-03
92GO:0016123: xanthophyll biosynthetic process5.58E-03
93GO:0034052: positive regulation of plant-type hypersensitive response5.58E-03
94GO:0055085: transmembrane transport6.56E-03
95GO:0010114: response to red light6.58E-03
96GO:0009926: auxin polar transport6.58E-03
97GO:0006751: glutathione catabolic process6.92E-03
98GO:0010256: endomembrane system organization6.92E-03
99GO:0060918: auxin transport6.92E-03
100GO:1902456: regulation of stomatal opening6.92E-03
101GO:0009644: response to high light intensity7.28E-03
102GO:0042335: cuticle development7.88E-03
103GO:0045490: pectin catabolic process7.88E-03
104GO:0006694: steroid biosynthetic process8.37E-03
105GO:2000033: regulation of seed dormancy process8.37E-03
106GO:0010019: chloroplast-nucleus signaling pathway8.37E-03
107GO:0042372: phylloquinone biosynthetic process8.37E-03
108GO:0009612: response to mechanical stimulus8.37E-03
109GO:0045454: cell redox homeostasis8.44E-03
110GO:0048868: pollen tube development8.50E-03
111GO:0042538: hyperosmotic salinity response8.81E-03
112GO:1900056: negative regulation of leaf senescence9.91E-03
113GO:0071554: cell wall organization or biogenesis1.05E-02
114GO:0000302: response to reactive oxygen species1.05E-02
115GO:0010583: response to cyclopentenone1.13E-02
116GO:0009819: drought recovery1.16E-02
117GO:0032508: DNA duplex unwinding1.16E-02
118GO:0046620: regulation of organ growth1.16E-02
119GO:0045010: actin nucleation1.16E-02
120GO:0009938: negative regulation of gibberellic acid mediated signaling pathway1.16E-02
121GO:0030091: protein repair1.16E-02
122GO:0043068: positive regulation of programmed cell death1.16E-02
123GO:0010233: phloem transport1.33E-02
124GO:0009657: plastid organization1.33E-02
125GO:0032544: plastid translation1.33E-02
126GO:0009808: lignin metabolic process1.33E-02
127GO:0009932: cell tip growth1.33E-02
128GO:0009409: response to cold1.39E-02
129GO:0000373: Group II intron splicing1.51E-02
130GO:0009051: pentose-phosphate shunt, oxidative branch1.51E-02
131GO:0090305: nucleic acid phosphodiester bond hydrolysis1.51E-02
132GO:0033384: geranyl diphosphate biosynthetic process1.51E-02
133GO:0045337: farnesyl diphosphate biosynthetic process1.51E-02
134GO:0010027: thylakoid membrane organization1.53E-02
135GO:0010205: photoinhibition1.70E-02
136GO:0009638: phototropism1.70E-02
137GO:0005975: carbohydrate metabolic process1.80E-02
138GO:0043069: negative regulation of programmed cell death1.90E-02
139GO:0048829: root cap development1.90E-02
140GO:0009870: defense response signaling pathway, resistance gene-dependent1.90E-02
141GO:0010311: lateral root formation2.10E-02
142GO:0048765: root hair cell differentiation2.11E-02
143GO:0009684: indoleacetic acid biosynthetic process2.11E-02
144GO:0010015: root morphogenesis2.11E-02
145GO:0000038: very long-chain fatty acid metabolic process2.11E-02
146GO:0006816: calcium ion transport2.11E-02
147GO:0009734: auxin-activated signaling pathway2.19E-02
148GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.22E-02
149GO:0009733: response to auxin2.25E-02
150GO:0016024: CDP-diacylglycerol biosynthetic process2.32E-02
151GO:0008361: regulation of cell size2.32E-02
152GO:0006790: sulfur compound metabolic process2.32E-02
153GO:0042744: hydrogen peroxide catabolic process2.38E-02
154GO:0009651: response to salt stress2.46E-02
155GO:0006006: glucose metabolic process2.54E-02
156GO:0030036: actin cytoskeleton organization2.54E-02
157GO:0009637: response to blue light2.54E-02
158GO:0009718: anthocyanin-containing compound biosynthetic process2.54E-02
159GO:0009767: photosynthetic electron transport chain2.54E-02
160GO:0010588: cotyledon vascular tissue pattern formation2.54E-02
161GO:0034599: cellular response to oxidative stress2.66E-02
162GO:0010540: basipetal auxin transport2.77E-02
163GO:0005985: sucrose metabolic process3.01E-02
164GO:0010030: positive regulation of seed germination3.01E-02
165GO:0070588: calcium ion transmembrane transport3.01E-02
166GO:0046854: phosphatidylinositol phosphorylation3.01E-02
167GO:0006636: unsaturated fatty acid biosynthetic process3.25E-02
168GO:0009640: photomorphogenesis3.28E-02
169GO:0009739: response to gibberellin3.48E-02
170GO:0000027: ribosomal large subunit assembly3.50E-02
171GO:0009863: salicylic acid mediated signaling pathway3.50E-02
172GO:0051017: actin filament bundle assembly3.50E-02
173GO:0010187: negative regulation of seed germination3.50E-02
174GO:2000377: regulation of reactive oxygen species metabolic process3.50E-02
175GO:0005992: trehalose biosynthetic process3.50E-02
176GO:0003333: amino acid transmembrane transport4.01E-02
177GO:0016998: cell wall macromolecule catabolic process4.01E-02
178GO:0048511: rhythmic process4.01E-02
179GO:0009664: plant-type cell wall organization4.11E-02
180GO:0009814: defense response, incompatible interaction4.28E-02
181GO:0010017: red or far-red light signaling pathway4.28E-02
182GO:0008152: metabolic process4.31E-02
183GO:0009411: response to UV4.55E-02
184GO:0006012: galactose metabolic process4.55E-02
185GO:0009831: plant-type cell wall modification involved in multidimensional cell growth4.55E-02
186GO:0006284: base-excision repair4.83E-02
187GO:0009306: protein secretion4.83E-02
188GO:0048443: stamen development4.83E-02
189GO:0006417: regulation of translation4.87E-02
190GO:0009826: unidimensional cell growth4.94E-02
RankGO TermAdjusted P value
1GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity0.00E+00
2GO:0045435: lycopene epsilon cyclase activity0.00E+00
3GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
4GO:0019146: arabinose-5-phosphate isomerase activity0.00E+00
5GO:0050614: delta24-sterol reductase activity0.00E+00
6GO:0046406: magnesium protoporphyrin IX methyltransferase activity0.00E+00
7GO:0047513: 1,2-alpha-L-fucosidase activity0.00E+00
8GO:0061634: alpha-D-xyloside xylohydrolase0.00E+00
9GO:0043864: indoleacetamide hydrolase activity0.00E+00
10GO:0080176: xyloglucan 1,6-alpha-xylosidase activity0.00E+00
11GO:0005528: FK506 binding4.11E-08
12GO:0016851: magnesium chelatase activity1.08E-06
13GO:0003755: peptidyl-prolyl cis-trans isomerase activity3.50E-06
14GO:0019843: rRNA binding3.89E-06
15GO:0015250: water channel activity4.25E-05
16GO:0052689: carboxylic ester hydrolase activity1.40E-04
17GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor1.99E-04
18GO:0016762: xyloglucan:xyloglucosyl transferase activity2.10E-04
19GO:0016788: hydrolase activity, acting on ester bonds2.93E-04
20GO:0004130: cytochrome-c peroxidase activity4.21E-04
21GO:0016798: hydrolase activity, acting on glycosyl bonds5.04E-04
22GO:0051920: peroxiredoxin activity5.59E-04
23GO:0045485: omega-6 fatty acid desaturase activity6.25E-04
24GO:0015245: fatty acid transporter activity6.25E-04
25GO:0004328: formamidase activity6.25E-04
26GO:0000170: sphingosine hydroxylase activity6.25E-04
27GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity6.25E-04
28GO:0080132: fatty acid alpha-hydroxylase activity6.25E-04
29GO:0030570: pectate lyase activity7.94E-04
30GO:0016209: antioxidant activity8.89E-04
31GO:0008967: phosphoglycolate phosphatase activity1.34E-03
32GO:0047746: chlorophyllase activity1.34E-03
33GO:0016868: intramolecular transferase activity, phosphotransferases1.34E-03
34GO:0003839: gamma-glutamylcyclotransferase activity1.34E-03
35GO:0003938: IMP dehydrogenase activity1.34E-03
36GO:0004047: aminomethyltransferase activity1.34E-03
37GO:0004750: ribulose-phosphate 3-epimerase activity1.34E-03
38GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity1.34E-03
39GO:0042284: sphingolipid delta-4 desaturase activity1.34E-03
40GO:0005200: structural constituent of cytoskeleton2.15E-03
41GO:0004075: biotin carboxylase activity2.21E-03
42GO:0045174: glutathione dehydrogenase (ascorbate) activity2.21E-03
43GO:0030267: glyoxylate reductase (NADP) activity2.21E-03
44GO:0010277: chlorophyllide a oxygenase [overall] activity2.21E-03
45GO:0050734: hydroxycinnamoyltransferase activity2.21E-03
46GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds2.50E-03
47GO:0016168: chlorophyll binding2.68E-03
48GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides3.22E-03
49GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity3.22E-03
50GO:0001872: (1->3)-beta-D-glucan binding3.22E-03
51GO:0003878: ATP citrate synthase activity3.22E-03
52GO:0004375: glycine dehydrogenase (decarboxylating) activity3.22E-03
53GO:0102337: 3-oxo-cerotoyl-CoA synthase activity3.82E-03
54GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity3.82E-03
55GO:0031409: pigment binding3.82E-03
56GO:0102336: 3-oxo-arachidoyl-CoA synthase activity3.82E-03
57GO:0052793: pectin acetylesterase activity4.34E-03
58GO:0046556: alpha-L-arabinofuranosidase activity4.34E-03
59GO:0004659: prenyltransferase activity4.34E-03
60GO:0010011: auxin binding4.34E-03
61GO:0004345: glucose-6-phosphate dehydrogenase activity4.34E-03
62GO:0016836: hydro-lyase activity4.34E-03
63GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds4.34E-03
64GO:0009044: xylan 1,4-beta-xylosidase activity4.34E-03
65GO:0010328: auxin influx transmembrane transporter activity4.34E-03
66GO:1990137: plant seed peroxidase activity4.34E-03
67GO:0016829: lyase activity5.43E-03
68GO:0004040: amidase activity5.58E-03
69GO:0003989: acetyl-CoA carboxylase activity5.58E-03
70GO:0008725: DNA-3-methyladenine glycosylase activity5.58E-03
71GO:0009922: fatty acid elongase activity5.58E-03
72GO:0003735: structural constituent of ribosome6.27E-03
73GO:0003727: single-stranded RNA binding6.71E-03
74GO:0016688: L-ascorbate peroxidase activity6.92E-03
75GO:0004366: glycerol-3-phosphate O-acyltransferase activity6.92E-03
76GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity6.92E-03
77GO:0016208: AMP binding6.92E-03
78GO:0051537: 2 iron, 2 sulfur cluster binding7.28E-03
79GO:0004559: alpha-mannosidase activity8.37E-03
80GO:0004017: adenylate kinase activity8.37E-03
81GO:0033743: peptide-methionine (R)-S-oxide reductase activity8.37E-03
82GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity8.37E-03
83GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity8.37E-03
84GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity8.37E-03
85GO:0048038: quinone binding1.05E-02
86GO:0004033: aldo-keto reductase (NADP) activity1.16E-02
87GO:0004564: beta-fructofuranosidase activity1.16E-02
88GO:0004034: aldose 1-epimerase activity1.16E-02
89GO:0046872: metal ion binding1.18E-02
90GO:0003924: GTPase activity1.22E-02
91GO:0016791: phosphatase activity1.28E-02
92GO:0016491: oxidoreductase activity1.30E-02
93GO:0016413: O-acetyltransferase activity1.44E-02
94GO:0005509: calcium ion binding1.50E-02
95GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors1.51E-02
96GO:0004337: geranyltranstransferase activity1.51E-02
97GO:0000989: transcription factor activity, transcription factor binding1.51E-02
98GO:0004601: peroxidase activity1.53E-02
99GO:0004575: sucrose alpha-glucosidase activity1.70E-02
100GO:0005381: iron ion transmembrane transporter activity1.70E-02
101GO:0004805: trehalose-phosphatase activity1.90E-02
102GO:0008236: serine-type peptidase activity1.90E-02
103GO:0005096: GTPase activator activity2.10E-02
104GO:0047372: acylglycerol lipase activity2.11E-02
105GO:0004161: dimethylallyltranstransferase activity2.11E-02
106GO:0008378: galactosyltransferase activity2.32E-02
107GO:0004565: beta-galactosidase activity2.54E-02
108GO:0010329: auxin efflux transmembrane transporter activity2.54E-02
109GO:0004089: carbonate dehydratase activity2.54E-02
110GO:0031072: heat shock protein binding2.54E-02
111GO:0005262: calcium channel activity2.54E-02
112GO:0003993: acid phosphatase activity2.66E-02
113GO:0008266: poly(U) RNA binding2.77E-02
114GO:0004871: signal transducer activity2.95E-02
115GO:0004364: glutathione transferase activity3.15E-02
116GO:0015293: symporter activity3.68E-02
117GO:0004176: ATP-dependent peptidase activity4.01E-02
118GO:0042626: ATPase activity, coupled to transmembrane movement of substances4.07E-02
119GO:0005515: protein binding4.54E-02
120GO:0022891: substrate-specific transmembrane transporter activity4.55E-02
121GO:0003756: protein disulfide isomerase activity4.83E-02
RankGO TermAdjusted P value
1GO:0005943: phosphatidylinositol 3-kinase complex, class IA0.00E+00
2GO:0009507: chloroplast3.08E-33
3GO:0009535: chloroplast thylakoid membrane7.46E-29
4GO:0009534: chloroplast thylakoid3.76E-28
5GO:0009543: chloroplast thylakoid lumen1.54E-20
6GO:0009570: chloroplast stroma2.10E-19
7GO:0009941: chloroplast envelope1.57E-16
8GO:0031977: thylakoid lumen1.78E-10
9GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)4.73E-10
10GO:0009579: thylakoid4.79E-10
11GO:0009505: plant-type cell wall1.17E-07
12GO:0010007: magnesium chelatase complex2.27E-07
13GO:0048046: apoplast4.55E-07
14GO:0009654: photosystem II oxygen evolving complex2.05E-06
15GO:0005618: cell wall3.66E-06
16GO:0019898: extrinsic component of membrane1.46E-05
17GO:0030095: chloroplast photosystem II1.92E-05
18GO:0045298: tubulin complex8.93E-05
19GO:0010287: plastoglobule2.06E-04
20GO:0016020: membrane2.45E-04
21GO:0042651: thylakoid membrane5.59E-04
22GO:0009515: granal stacked thylakoid6.25E-04
23GO:0009344: nitrite reductase complex [NAD(P)H]6.25E-04
24GO:0009782: photosystem I antenna complex6.25E-04
25GO:0043674: columella6.25E-04
26GO:0009533: chloroplast stromal thylakoid7.14E-04
27GO:0046658: anchored component of plasma membrane8.22E-04
28GO:0009538: photosystem I reaction center8.89E-04
29GO:0031225: anchored component of membrane1.31E-03
30GO:0031969: chloroplast membrane1.72E-03
31GO:0009897: external side of plasma membrane2.21E-03
32GO:0005576: extracellular region2.80E-03
33GO:0009346: citrate lyase complex3.22E-03
34GO:0009531: secondary cell wall3.22E-03
35GO:0005775: vacuolar lumen3.22E-03
36GO:0005960: glycine cleavage complex3.22E-03
37GO:0032432: actin filament bundle3.22E-03
38GO:0005886: plasma membrane3.31E-03
39GO:0009706: chloroplast inner membrane3.41E-03
40GO:0030076: light-harvesting complex3.42E-03
41GO:0005874: microtubule5.80E-03
42GO:0005887: integral component of plasma membrane6.82E-03
43GO:0031209: SCAR complex6.92E-03
44GO:0009523: photosystem II9.82E-03
45GO:0009986: cell surface9.91E-03
46GO:0042807: central vacuole9.91E-03
47GO:0005773: vacuole1.02E-02
48GO:0005811: lipid particle1.33E-02
49GO:0010319: stromule1.36E-02
50GO:0008180: COP9 signalosome1.51E-02
51GO:0005840: ribosome1.95E-02
52GO:0005884: actin filament2.11E-02
53GO:0000311: plastid large ribosomal subunit2.32E-02
54GO:0032040: small-subunit processome2.32E-02
55GO:0009705: plant-type vacuole membrane3.02E-02
56GO:0005875: microtubule associated complex3.25E-02
57GO:0016021: integral component of membrane3.60E-02
58GO:0015935: small ribosomal subunit4.01E-02
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Gene type



Gene DE type