co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G13950

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0051553: flavone biosynthetic process	0.00E+00
2	GO:0006182: cGMP biosynthetic process	0.00E+00
3	GO:0072722: response to amitrole	0.00E+00
4	GO:0071327: cellular response to trehalose stimulus	0.00E+00
5	GO:1900367: positive regulation of defense response to insect	0.00E+00
6	GO:0042430: indole-containing compound metabolic process	0.00E+00
7	GO:0006616: SRP-dependent cotranslational protein targeting to membrane, translocation	0.00E+00
8	GO:0042742: defense response to bacterium	3.40E-12
9	GO:0006457: protein folding	2.08E-11
10	GO:0034976: response to endoplasmic reticulum stress	7.05E-10
11	GO:0009617: response to bacterium	1.01E-09
12	GO:0010942: positive regulation of cell death	9.43E-09
13	GO:0009751: response to salicylic acid	6.40E-08
14	GO:0009627: systemic acquired resistance	1.15E-07
15	GO:0006468: protein phosphorylation	3.61E-07
16	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	3.83E-06
17	GO:0010618: aerenchyma formation	3.83E-06
18	GO:0006952: defense response	4.57E-06
19	GO:0010150: leaf senescence	3.04E-05
20	GO:0002239: response to oomycetes	3.07E-05
21	GO:0045454: cell redox homeostasis	3.61E-05
22	GO:0002237: response to molecule of bacterial origin	6.11E-05
23	GO:0000304: response to singlet oxygen	8.74E-05
24	GO:0009697: salicylic acid biosynthetic process	8.74E-05
25	GO:0055114: oxidation-reduction process	9.29E-05
26	GO:0046686: response to cadmium ion	1.03E-04
27	GO:0031348: negative regulation of defense response	1.55E-04
28	GO:0010310: regulation of hydrogen peroxide metabolic process	1.74E-04
29	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.74E-04
30	GO:0030091: protein repair	2.87E-04
31	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	2.87E-04
32	GO:0060862: negative regulation of floral organ abscission	2.89E-04
33	GO:0034975: protein folding in endoplasmic reticulum	2.89E-04
34	GO:0010726: positive regulation of hydrogen peroxide metabolic process	2.89E-04
35	GO:0043687: post-translational protein modification	2.89E-04
36	GO:1901183: positive regulation of camalexin biosynthetic process	2.89E-04
37	GO:0046244: salicylic acid catabolic process	2.89E-04
38	GO:0050691: regulation of defense response to virus by host	2.89E-04
39	GO:0030968: endoplasmic reticulum unfolded protein response	3.53E-04
40	GO:0010120: camalexin biosynthetic process	3.53E-04
41	GO:0002229: defense response to oomycetes	3.64E-04
42	GO:0030163: protein catabolic process	4.31E-04
43	GO:0009626: plant-type hypersensitive response	4.88E-04
44	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	5.03E-04
45	GO:0009620: response to fungus	5.12E-04
46	GO:0009615: response to virus	5.86E-04
47	GO:0006032: chitin catabolic process	5.88E-04
48	GO:0009816: defense response to bacterium, incompatible interaction	6.29E-04
49	GO:0080183: response to photooxidative stress	6.34E-04
50	GO:0031204: posttranslational protein targeting to membrane, translocation	6.34E-04
51	GO:0009838: abscission	6.34E-04
52	GO:0009866: induced systemic resistance, ethylene mediated signaling pathway	6.34E-04
53	GO:0031349: positive regulation of defense response	6.34E-04
54	GO:0030003: cellular cation homeostasis	6.34E-04
55	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	6.34E-04
56	GO:0009682: induced systemic resistance	6.77E-04
57	GO:0002213: defense response to insect	7.74E-04
58	GO:0008219: cell death	8.19E-04
59	GO:0009817: defense response to fungus, incompatible interaction	8.19E-04
60	GO:0010200: response to chitin	8.50E-04
61	GO:0010272: response to silver ion	1.03E-03
62	GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	1.03E-03
63	GO:0055074: calcium ion homeostasis	1.03E-03
64	GO:0009062: fatty acid catabolic process	1.03E-03
65	GO:0010167: response to nitrate	1.10E-03
66	GO:0006099: tricarboxylic acid cycle	1.16E-03
67	GO:0009863: salicylic acid mediated signaling pathway	1.35E-03
68	GO:0010116: positive regulation of abscisic acid biosynthetic process	1.47E-03
69	GO:0072334: UDP-galactose transmembrane transport	1.47E-03
70	GO:0015696: ammonium transport	1.47E-03
71	GO:0002679: respiratory burst involved in defense response	1.47E-03
72	GO:0006874: cellular calcium ion homeostasis	1.49E-03
73	GO:0009408: response to heat	1.58E-03
74	GO:0016998: cell wall macromolecule catabolic process	1.64E-03
75	GO:0098542: defense response to other organism	1.64E-03
76	GO:0030433: ubiquitin-dependent ERAD pathway	1.79E-03
77	GO:0031347: regulation of defense response	1.92E-03
78	GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway	1.97E-03
79	GO:0080142: regulation of salicylic acid biosynthetic process	1.97E-03
80	GO:0046345: abscisic acid catabolic process	1.97E-03
81	GO:0072488: ammonium transmembrane transport	1.97E-03
82	GO:0050832: defense response to fungus	2.08E-03
83	GO:0046283: anthocyanin-containing compound metabolic process	2.52E-03
84	GO:0010225: response to UV-C	2.52E-03
85	GO:0030041: actin filament polymerization	2.52E-03
86	GO:0018279: protein N-linked glycosylation via asparagine	2.52E-03
87	GO:0006561: proline biosynthetic process	3.11E-03
88	GO:0010256: endomembrane system organization	3.11E-03
89	GO:0047484: regulation of response to osmotic stress	3.11E-03
90	GO:0000302: response to reactive oxygen species	3.30E-03
91	GO:0010193: response to ozone	3.30E-03
92	GO:0009553: embryo sac development	3.32E-03
93	GO:0042372: phylloquinone biosynthetic process	3.74E-03
94	GO:1902074: response to salt	4.41E-03
95	GO:1900056: negative regulation of leaf senescence	4.41E-03
96	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	4.41E-03
97	GO:0001666: response to hypoxia	4.76E-03
98	GO:0006102: isocitrate metabolic process	5.12E-03
99	GO:0010204: defense response signaling pathway, resistance gene-independent	5.87E-03
100	GO:0043562: cellular response to nitrogen levels	5.87E-03
101	GO:2000031: regulation of salicylic acid mediated signaling pathway	5.87E-03
102	GO:0009699: phenylpropanoid biosynthetic process	5.87E-03
103	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	5.87E-03
104	GO:0009060: aerobic respiration	6.65E-03
105	GO:0015780: nucleotide-sugar transport	6.65E-03
106	GO:0046685: response to arsenic-containing substance	6.65E-03
107	GO:0051865: protein autoubiquitination	6.65E-03
108	GO:1900426: positive regulation of defense response to bacterium	7.48E-03
109	GO:0010205: photoinhibition	7.48E-03
110	GO:0043067: regulation of programmed cell death	7.48E-03
111	GO:0090332: stomatal closure	7.48E-03
112	GO:0030042: actin filament depolymerization	7.48E-03
113	GO:0009651: response to salt stress	7.54E-03
114	GO:0045087: innate immune response	7.88E-03
115	GO:0007166: cell surface receptor signaling pathway	8.22E-03
116	GO:0009688: abscisic acid biosynthetic process	8.33E-03
117	GO:0043069: negative regulation of programmed cell death	8.33E-03
118	GO:0006896: Golgi to vacuole transport	8.33E-03
119	GO:0000272: polysaccharide catabolic process	9.22E-03
120	GO:0016485: protein processing	9.22E-03
121	GO:0006816: calcium ion transport	9.22E-03
122	GO:0009073: aromatic amino acid family biosynthetic process	9.22E-03
123	GO:0042542: response to hydrogen peroxide	9.77E-03
124	GO:0071365: cellular response to auxin stimulus	1.01E-02
125	GO:0000266: mitochondrial fission	1.01E-02
126	GO:0006790: sulfur compound metabolic process	1.01E-02
127	GO:0012501: programmed cell death	1.01E-02
128	GO:0015706: nitrate transport	1.01E-02
129	GO:0010105: negative regulation of ethylene-activated signaling pathway	1.01E-02
130	GO:0051707: response to other organism	1.02E-02
131	GO:0009718: anthocyanin-containing compound biosynthetic process	1.11E-02
132	GO:0010075: regulation of meristem growth	1.11E-02
133	GO:0006855: drug transmembrane transport	1.19E-02
134	GO:0009934: regulation of meristem structural organization	1.21E-02
135	GO:0046854: phosphatidylinositol phosphorylation	1.31E-02
136	GO:0042343: indole glucosinolate metabolic process	1.31E-02
137	GO:0006970: response to osmotic stress	1.33E-02
138	GO:0006979: response to oxidative stress	1.50E-02
139	GO:0005992: trehalose biosynthetic process	1.52E-02
140	GO:0080147: root hair cell development	1.52E-02
141	GO:0010187: negative regulation of seed germination	1.52E-02
142	GO:0044550: secondary metabolite biosynthetic process	1.77E-02
143	GO:0071456: cellular response to hypoxia	1.86E-02
144	GO:0019748: secondary metabolic process	1.86E-02
145	GO:0009814: defense response, incompatible interaction	1.86E-02
146	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.86E-02
147	GO:0009624: response to nematode	1.96E-02
148	GO:0009411: response to UV	1.98E-02
149	GO:0009625: response to insect	1.98E-02
150	GO:0010227: floral organ abscission	1.98E-02
151	GO:0009737: response to abscisic acid	2.02E-02
152	GO:0009306: protein secretion	2.10E-02
153	GO:0008033: tRNA processing	2.35E-02
154	GO:0010118: stomatal movement	2.35E-02
155	GO:0010197: polar nucleus fusion	2.48E-02
156	GO:0048868: pollen tube development	2.48E-02
157	GO:0008360: regulation of cell shape	2.48E-02
158	GO:0009851: auxin biosynthetic process	2.75E-02
159	GO:0006623: protein targeting to vacuole	2.75E-02
160	GO:0006635: fatty acid beta-oxidation	2.88E-02
161	GO:0080156: mitochondrial mRNA modification	2.88E-02
162	GO:0006891: intra-Golgi vesicle-mediated transport	2.88E-02
163	GO:0009567: double fertilization forming a zygote and endosperm	3.31E-02
164	GO:0006464: cellular protein modification process	3.31E-02
165	GO:0016126: sterol biosynthetic process	3.75E-02
166	GO:0009607: response to biotic stimulus	3.90E-02
167	GO:0006508: proteolysis	3.98E-02
168	GO:0042128: nitrate assimilation	4.05E-02
169	GO:0016311: dephosphorylation	4.37E-02
170	GO:0009813: flavonoid biosynthetic process	4.69E-02
171	GO:0009735: response to cytokinin	4.72E-02
172	GO:0006499: N-terminal protein myristoylation	4.85E-02
173	GO:0009407: toxin catabolic process	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0033759: flavone synthase activity	0.00E+00
2	GO:0050269: coniferyl-aldehyde dehydrogenase activity	0.00E+00
3	GO:0047720: indoleacetaldoxime dehydratase activity	0.00E+00
4	GO:0004631: phosphomevalonate kinase activity	0.00E+00
5	GO:0016312: inositol bisphosphate phosphatase activity	0.00E+00
6	GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity	0.00E+00
7	GO:0004674: protein serine/threonine kinase activity	1.78E-09
8	GO:0003756: protein disulfide isomerase activity	5.11E-09
9	GO:0016301: kinase activity	3.43E-07
10	GO:0005524: ATP binding	3.22E-06
11	GO:0051082: unfolded protein binding	6.57E-06
12	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	9.29E-06
13	GO:0005460: UDP-glucose transmembrane transporter activity	3.07E-05
14	GO:0005459: UDP-galactose transmembrane transporter activity	8.74E-05
15	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.13E-04
16	GO:0004656: procollagen-proline 4-dioxygenase activity	1.74E-04
17	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	1.74E-04
18	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	2.89E-04
19	GO:0008809: carnitine racemase activity	2.89E-04
20	GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity	2.89E-04
21	GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity	2.89E-04
22	GO:0048037: cofactor binding	2.89E-04
23	GO:0008909: isochorismate synthase activity	2.89E-04
24	GO:0005509: calcium ion binding	3.41E-04
25	GO:0004568: chitinase activity	5.88E-04
26	GO:0004776: succinate-CoA ligase (GDP-forming) activity	6.34E-04
27	GO:0004775: succinate-CoA ligase (ADP-forming) activity	6.34E-04
28	GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity	6.34E-04
29	GO:0050660: flavin adenine dinucleotide binding	7.09E-04
30	GO:0004383: guanylate cyclase activity	1.03E-03
31	GO:0000030: mannosyltransferase activity	1.03E-03
32	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	1.03E-03
33	GO:0004148: dihydrolipoyl dehydrogenase activity	1.03E-03
34	GO:0019003: GDP binding	1.03E-03
35	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	1.03E-03
36	GO:0005217: intracellular ligand-gated ion channel activity	1.10E-03
37	GO:0004970: ionotropic glutamate receptor activity	1.10E-03
38	GO:0031418: L-ascorbic acid binding	1.35E-03
39	GO:0005506: iron ion binding	1.37E-03
40	GO:0004165: dodecenoyl-CoA delta-isomerase activity	1.47E-03
41	GO:0035529: NADH pyrophosphatase activity	1.47E-03
42	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.47E-03
43	GO:0009055: electron carrier activity	1.79E-03
44	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.97E-03
45	GO:0005086: ARF guanyl-nucleotide exchange factor activity	1.97E-03
46	GO:0004031: aldehyde oxidase activity	1.97E-03
47	GO:0050302: indole-3-acetaldehyde oxidase activity	1.97E-03
48	GO:0004576: oligosaccharyl transferase activity	1.97E-03
49	GO:0016298: lipase activity	2.30E-03
50	GO:0047631: ADP-ribose diphosphatase activity	2.52E-03
51	GO:0002020: protease binding	2.52E-03
52	GO:0010294: abscisic acid glucosyltransferase activity	2.52E-03
53	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	2.52E-03
54	GO:0016853: isomerase activity	2.87E-03
55	GO:0010181: FMN binding	2.87E-03
56	GO:0008519: ammonium transmembrane transporter activity	3.11E-03
57	GO:0030976: thiamine pyrophosphate binding	3.11E-03
58	GO:0000210: NAD+ diphosphatase activity	3.11E-03
59	GO:0004029: aldehyde dehydrogenase (NAD) activity	3.11E-03
60	GO:0015035: protein disulfide oxidoreductase activity	3.58E-03
61	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	3.74E-03
62	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	3.74E-03
63	GO:0005261: cation channel activity	3.74E-03
64	GO:0051213: dioxygenase activity	4.76E-03
65	GO:0004714: transmembrane receptor protein tyrosine kinase activity	5.12E-03
66	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	5.37E-03
67	GO:0004683: calmodulin-dependent protein kinase activity	5.61E-03
68	GO:0004806: triglyceride lipase activity	5.61E-03
69	GO:0030247: polysaccharide binding	5.61E-03
70	GO:0003843: 1,3-beta-D-glucan synthase activity	5.87E-03
71	GO:0015238: drug transmembrane transporter activity	6.53E-03
72	GO:0050897: cobalt ion binding	7.19E-03
73	GO:0015112: nitrate transmembrane transporter activity	7.48E-03
74	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	7.48E-03
75	GO:0045309: protein phosphorylated amino acid binding	7.48E-03
76	GO:0004713: protein tyrosine kinase activity	8.33E-03
77	GO:0008559: xenobiotic-transporting ATPase activity	9.22E-03
78	GO:0019904: protein domain specific binding	9.22E-03
79	GO:0051537: 2 iron, 2 sulfur cluster binding	1.10E-02
80	GO:0031072: heat shock protein binding	1.11E-02
81	GO:0005262: calcium channel activity	1.11E-02
82	GO:0004022: alcohol dehydrogenase (NAD) activity	1.11E-02
83	GO:0004190: aspartic-type endopeptidase activity	1.31E-02
84	GO:0008061: chitin binding	1.31E-02
85	GO:0003712: transcription cofactor activity	1.31E-02
86	GO:0004298: threonine-type endopeptidase activity	1.75E-02
87	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.79E-02
88	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.79E-02
89	GO:0003779: actin binding	1.90E-02
90	GO:0030246: carbohydrate binding	2.43E-02
91	GO:0008080: N-acetyltransferase activity	2.48E-02
92	GO:0019825: oxygen binding	2.64E-02
93	GO:0005507: copper ion binding	2.64E-02
94	GO:0004672: protein kinase activity	2.84E-02
95	GO:0046872: metal ion binding	2.85E-02
96	GO:0005516: calmodulin binding	2.87E-02
97	GO:0008565: protein transporter activity	2.94E-02
98	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	3.16E-02
99	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.16E-02
100	GO:0015297: antiporter activity	3.24E-02
101	GO:0008237: metallopeptidase activity	3.45E-02
102	GO:0008194: UDP-glycosyltransferase activity	3.79E-02
103	GO:0009931: calcium-dependent protein serine/threonine kinase activity	4.05E-02
104	GO:0042802: identical protein binding	4.30E-02
105	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	4.37E-02
106	GO:0043565: sequence-specific DNA binding	4.51E-02
107	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	4.53E-02
108	GO:0004222: metalloendopeptidase activity	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0005784: Sec61 translocon complex	0.00E+00
2	GO:0031205: endoplasmic reticulum Sec complex	0.00E+00
3	GO:0000327: lytic vacuole within protein storage vacuole	0.00E+00
4	GO:0005788: endoplasmic reticulum lumen	1.76E-14
5	GO:0005783: endoplasmic reticulum	3.41E-13
6	GO:0005886: plasma membrane	1.42E-10
7	GO:0005774: vacuolar membrane	1.39E-06
8	GO:0005911: cell-cell junction	2.89E-04
9	GO:0045252: oxoglutarate dehydrogenase complex	2.89E-04
10	GO:0005829: cytosol	3.22E-04
11	GO:0016020: membrane	7.81E-04
12	GO:0016021: integral component of membrane	1.09E-03
13	GO:0030176: integral component of endoplasmic reticulum membrane	1.10E-03
14	GO:0005741: mitochondrial outer membrane	1.64E-03
15	GO:0009898: cytoplasmic side of plasma membrane	1.97E-03
16	GO:0008250: oligosaccharyltransferase complex	2.52E-03
17	GO:0016592: mediator complex	3.52E-03
18	GO:0030173: integral component of Golgi membrane	3.74E-03
19	GO:0000326: protein storage vacuole	5.87E-03
20	GO:0019773: proteasome core complex, alpha-subunit complex	5.87E-03
21	GO:0000148: 1,3-beta-D-glucan synthase complex	5.87E-03
22	GO:0005576: extracellular region	6.02E-03
23	GO:0030665: clathrin-coated vesicle membrane	7.48E-03
24	GO:0005740: mitochondrial envelope	8.33E-03
25	GO:0017119: Golgi transport complex	8.33E-03
26	GO:0005773: vacuole	9.08E-03
27	GO:0008541: proteasome regulatory particle, lid subcomplex	9.22E-03
28	GO:0005789: endoplasmic reticulum membrane	1.07E-02
29	GO:0005750: mitochondrial respiratory chain complex III	1.21E-02
30	GO:0005795: Golgi stack	1.31E-02
31	GO:0000502: proteasome complex	1.38E-02
32	GO:0005758: mitochondrial intermembrane space	1.52E-02
33	GO:0005839: proteasome core complex	1.75E-02
34	GO:0009506: plasmodesma	1.97E-02
35	GO:0015629: actin cytoskeleton	1.98E-02
36	GO:0009536: plastid	2.10E-02
37	GO:0009505: plant-type cell wall	2.17E-02
38	GO:0030136: clathrin-coated vesicle	2.23E-02
39	GO:0005794: Golgi apparatus	2.26E-02
40	GO:0048046: apoplast	2.27E-02
41	GO:0005618: cell wall	2.71E-02
42	GO:0009504: cell plate	2.75E-02
43	GO:0005759: mitochondrial matrix	3.09E-02