GO Enrichment Analysis of Co-expressed Genes with
AT1G13740
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation | 0.00E+00 |
| 2 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 3 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 4 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 5 | GO:0042593: glucose homeostasis | 0.00E+00 |
| 6 | GO:0061157: mRNA destabilization | 0.00E+00 |
| 7 | GO:0009735: response to cytokinin | 7.41E-06 |
| 8 | GO:0080170: hydrogen peroxide transmembrane transport | 1.63E-05 |
| 9 | GO:0034220: ion transmembrane transport | 1.20E-04 |
| 10 | GO:0071370: cellular response to gibberellin stimulus | 2.02E-04 |
| 11 | GO:0000481: maturation of 5S rRNA | 2.02E-04 |
| 12 | GO:0034337: RNA folding | 2.02E-04 |
| 13 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 2.02E-04 |
| 14 | GO:0010206: photosystem II repair | 2.53E-04 |
| 15 | GO:0001736: establishment of planar polarity | 4.52E-04 |
| 16 | GO:0010143: cutin biosynthetic process | 6.01E-04 |
| 17 | GO:0010030: positive regulation of seed germination | 6.71E-04 |
| 18 | GO:0006518: peptide metabolic process | 7.36E-04 |
| 19 | GO:0045493: xylan catabolic process | 7.36E-04 |
| 20 | GO:2001295: malonyl-CoA biosynthetic process | 7.36E-04 |
| 21 | GO:0006833: water transport | 7.47E-04 |
| 22 | GO:0006810: transport | 1.04E-03 |
| 23 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 1.05E-03 |
| 24 | GO:0009226: nucleotide-sugar biosynthetic process | 1.05E-03 |
| 25 | GO:0006424: glutamyl-tRNA aminoacylation | 1.05E-03 |
| 26 | GO:1901332: negative regulation of lateral root development | 1.05E-03 |
| 27 | GO:2001141: regulation of RNA biosynthetic process | 1.05E-03 |
| 28 | GO:0051513: regulation of monopolar cell growth | 1.05E-03 |
| 29 | GO:0034059: response to anoxia | 1.05E-03 |
| 30 | GO:0009658: chloroplast organization | 1.18E-03 |
| 31 | GO:0030104: water homeostasis | 1.40E-03 |
| 32 | GO:0006546: glycine catabolic process | 1.40E-03 |
| 33 | GO:0045727: positive regulation of translation | 1.40E-03 |
| 34 | GO:0000413: protein peptidyl-prolyl isomerization | 1.49E-03 |
| 35 | GO:0032543: mitochondrial translation | 1.78E-03 |
| 36 | GO:0006461: protein complex assembly | 1.78E-03 |
| 37 | GO:0015979: photosynthesis | 2.01E-03 |
| 38 | GO:0045454: cell redox homeostasis | 2.16E-03 |
| 39 | GO:0000741: karyogamy | 2.19E-03 |
| 40 | GO:1902456: regulation of stomatal opening | 2.19E-03 |
| 41 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 2.19E-03 |
| 42 | GO:0006751: glutathione catabolic process | 2.19E-03 |
| 43 | GO:0042549: photosystem II stabilization | 2.19E-03 |
| 44 | GO:0009612: response to mechanical stimulus | 2.63E-03 |
| 45 | GO:0010196: nonphotochemical quenching | 3.09E-03 |
| 46 | GO:0009645: response to low light intensity stimulus | 3.09E-03 |
| 47 | GO:0009772: photosynthetic electron transport in photosystem II | 3.09E-03 |
| 48 | GO:0015995: chlorophyll biosynthetic process | 3.35E-03 |
| 49 | GO:0010411: xyloglucan metabolic process | 3.35E-03 |
| 50 | GO:0008152: metabolic process | 3.44E-03 |
| 51 | GO:0032508: DNA duplex unwinding | 3.59E-03 |
| 52 | GO:0010311: lateral root formation | 3.89E-03 |
| 53 | GO:0009657: plastid organization | 4.10E-03 |
| 54 | GO:0006526: arginine biosynthetic process | 4.10E-03 |
| 55 | GO:0032544: plastid translation | 4.10E-03 |
| 56 | GO:0071482: cellular response to light stimulus | 4.10E-03 |
| 57 | GO:0006865: amino acid transport | 4.48E-03 |
| 58 | GO:0009637: response to blue light | 4.69E-03 |
| 59 | GO:0048829: root cap development | 5.80E-03 |
| 60 | GO:0010114: response to red light | 6.04E-03 |
| 61 | GO:0009773: photosynthetic electron transport in photosystem I | 6.41E-03 |
| 62 | GO:0006352: DNA-templated transcription, initiation | 6.41E-03 |
| 63 | GO:0048765: root hair cell differentiation | 6.41E-03 |
| 64 | GO:0009684: indoleacetic acid biosynthetic process | 6.41E-03 |
| 65 | GO:0010015: root morphogenesis | 6.41E-03 |
| 66 | GO:0016024: CDP-diacylglycerol biosynthetic process | 7.04E-03 |
| 67 | GO:0009664: plant-type cell wall organization | 7.58E-03 |
| 68 | GO:0009767: photosynthetic electron transport chain | 7.70E-03 |
| 69 | GO:0010207: photosystem II assembly | 8.37E-03 |
| 70 | GO:0005985: sucrose metabolic process | 9.07E-03 |
| 71 | GO:0006418: tRNA aminoacylation for protein translation | 1.13E-02 |
| 72 | GO:0007017: microtubule-based process | 1.13E-02 |
| 73 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.13E-02 |
| 74 | GO:0009624: response to nematode | 1.16E-02 |
| 75 | GO:0003333: amino acid transmembrane transport | 1.21E-02 |
| 76 | GO:0048511: rhythmic process | 1.21E-02 |
| 77 | GO:0035428: hexose transmembrane transport | 1.29E-02 |
| 78 | GO:0006012: galactose metabolic process | 1.37E-02 |
| 79 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.37E-02 |
| 80 | GO:0006508: proteolysis | 1.49E-02 |
| 81 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 1.54E-02 |
| 82 | GO:0006412: translation | 1.61E-02 |
| 83 | GO:0080022: primary root development | 1.62E-02 |
| 84 | GO:0042631: cellular response to water deprivation | 1.62E-02 |
| 85 | GO:0009958: positive gravitropism | 1.71E-02 |
| 86 | GO:0006520: cellular amino acid metabolic process | 1.71E-02 |
| 87 | GO:0010197: polar nucleus fusion | 1.71E-02 |
| 88 | GO:0048868: pollen tube development | 1.71E-02 |
| 89 | GO:0046323: glucose import | 1.71E-02 |
| 90 | GO:0042752: regulation of circadian rhythm | 1.80E-02 |
| 91 | GO:0006633: fatty acid biosynthetic process | 1.83E-02 |
| 92 | GO:0002229: defense response to oomycetes | 1.99E-02 |
| 93 | GO:0000302: response to reactive oxygen species | 1.99E-02 |
| 94 | GO:0042742: defense response to bacterium | 2.05E-02 |
| 95 | GO:0030163: protein catabolic process | 2.18E-02 |
| 96 | GO:0009828: plant-type cell wall loosening | 2.28E-02 |
| 97 | GO:0010027: thylakoid membrane organization | 2.58E-02 |
| 98 | GO:0009627: systemic acquired resistance | 2.80E-02 |
| 99 | GO:0009826: unidimensional cell growth | 3.00E-02 |
| 100 | GO:0009817: defense response to fungus, incompatible interaction | 3.12E-02 |
| 101 | GO:0048481: plant ovule development | 3.12E-02 |
| 102 | GO:0018298: protein-chromophore linkage | 3.12E-02 |
| 103 | GO:0010218: response to far red light | 3.35E-02 |
| 104 | GO:0009723: response to ethylene | 3.60E-02 |
| 105 | GO:0005975: carbohydrate metabolic process | 3.79E-02 |
| 106 | GO:0034599: cellular response to oxidative stress | 3.81E-02 |
| 107 | GO:0080167: response to karrikin | 3.86E-02 |
| 108 | GO:0046686: response to cadmium ion | 3.93E-02 |
| 109 | GO:0030001: metal ion transport | 4.05E-02 |
| 110 | GO:0009926: auxin polar transport | 4.42E-02 |
| 111 | GO:0042546: cell wall biogenesis | 4.55E-02 |
| 112 | GO:0006855: drug transmembrane transport | 4.93E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 2 | GO:0061634: alpha-D-xyloside xylohydrolase | 0.00E+00 |
| 3 | GO:0043864: indoleacetamide hydrolase activity | 0.00E+00 |
| 4 | GO:0080176: xyloglucan 1,6-alpha-xylosidase activity | 0.00E+00 |
| 5 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 6 | GO:0047513: 1,2-alpha-L-fucosidase activity | 0.00E+00 |
| 7 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 7.19E-06 |
| 8 | GO:0019843: rRNA binding | 4.11E-05 |
| 9 | GO:0005528: FK506 binding | 4.66E-05 |
| 10 | GO:0003959: NADPH dehydrogenase activity | 4.82E-05 |
| 11 | GO:0008200: ion channel inhibitor activity | 7.11E-05 |
| 12 | GO:0051920: peroxiredoxin activity | 9.88E-05 |
| 13 | GO:0016209: antioxidant activity | 1.67E-04 |
| 14 | GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity | 2.02E-04 |
| 15 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 2.02E-04 |
| 16 | GO:0015250: water channel activity | 3.01E-04 |
| 17 | GO:0008967: phosphoglycolate phosphatase activity | 4.52E-04 |
| 18 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 4.52E-04 |
| 19 | GO:0004802: transketolase activity | 4.52E-04 |
| 20 | GO:0016868: intramolecular transferase activity, phosphotransferases | 4.52E-04 |
| 21 | GO:0003839: gamma-glutamylcyclotransferase activity | 4.52E-04 |
| 22 | GO:0004047: aminomethyltransferase activity | 4.52E-04 |
| 23 | GO:0008266: poly(U) RNA binding | 6.01E-04 |
| 24 | GO:0050734: hydroxycinnamoyltransferase activity | 7.36E-04 |
| 25 | GO:0002161: aminoacyl-tRNA editing activity | 7.36E-04 |
| 26 | GO:0004075: biotin carboxylase activity | 7.36E-04 |
| 27 | GO:0030267: glyoxylate reductase (NADP) activity | 7.36E-04 |
| 28 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 7.36E-04 |
| 29 | GO:0004324: ferredoxin-NADP+ reductase activity | 7.36E-04 |
| 30 | GO:0016851: magnesium chelatase activity | 1.05E-03 |
| 31 | GO:0016987: sigma factor activity | 1.40E-03 |
| 32 | GO:0010328: auxin influx transmembrane transporter activity | 1.40E-03 |
| 33 | GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 1.40E-03 |
| 34 | GO:0009044: xylan 1,4-beta-xylosidase activity | 1.40E-03 |
| 35 | GO:0046556: alpha-L-arabinofuranosidase activity | 1.40E-03 |
| 36 | GO:0001053: plastid sigma factor activity | 1.40E-03 |
| 37 | GO:0010011: auxin binding | 1.40E-03 |
| 38 | GO:0016836: hydro-lyase activity | 1.40E-03 |
| 39 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 1.40E-03 |
| 40 | GO:0004040: amidase activity | 1.78E-03 |
| 41 | GO:0003989: acetyl-CoA carboxylase activity | 1.78E-03 |
| 42 | GO:0003735: structural constituent of ribosome | 2.03E-03 |
| 43 | GO:0004130: cytochrome-c peroxidase activity | 2.19E-03 |
| 44 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 2.19E-03 |
| 45 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 2.19E-03 |
| 46 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 2.63E-03 |
| 47 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 2.63E-03 |
| 48 | GO:0004034: aldose 1-epimerase activity | 3.59E-03 |
| 49 | GO:0004033: aldo-keto reductase (NADP) activity | 3.59E-03 |
| 50 | GO:0004564: beta-fructofuranosidase activity | 3.59E-03 |
| 51 | GO:0005096: GTPase activator activity | 3.89E-03 |
| 52 | GO:0004575: sucrose alpha-glucosidase activity | 5.21E-03 |
| 53 | GO:0004601: peroxidase activity | 6.22E-03 |
| 54 | GO:0000049: tRNA binding | 7.04E-03 |
| 55 | GO:0008378: galactosyltransferase activity | 7.04E-03 |
| 56 | GO:0051287: NAD binding | 7.31E-03 |
| 57 | GO:0004565: beta-galactosidase activity | 7.70E-03 |
| 58 | GO:0004022: alcohol dehydrogenase (NAD) activity | 7.70E-03 |
| 59 | GO:0031072: heat shock protein binding | 7.70E-03 |
| 60 | GO:0015171: amino acid transmembrane transporter activity | 9.02E-03 |
| 61 | GO:0031409: pigment binding | 9.79E-03 |
| 62 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 1.08E-02 |
| 63 | GO:0030570: pectate lyase activity | 1.37E-02 |
| 64 | GO:0003756: protein disulfide isomerase activity | 1.45E-02 |
| 65 | GO:0003727: single-stranded RNA binding | 1.45E-02 |
| 66 | GO:0004812: aminoacyl-tRNA ligase activity | 1.54E-02 |
| 67 | GO:0004252: serine-type endopeptidase activity | 1.62E-02 |
| 68 | GO:0005355: glucose transmembrane transporter activity | 1.80E-02 |
| 69 | GO:0050662: coenzyme binding | 1.80E-02 |
| 70 | GO:0016853: isomerase activity | 1.80E-02 |
| 71 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.99E-02 |
| 72 | GO:0048038: quinone binding | 1.99E-02 |
| 73 | GO:0016791: phosphatase activity | 2.28E-02 |
| 74 | GO:0008483: transaminase activity | 2.38E-02 |
| 75 | GO:0005200: structural constituent of cytoskeleton | 2.38E-02 |
| 76 | GO:0016597: amino acid binding | 2.48E-02 |
| 77 | GO:0016168: chlorophyll binding | 2.69E-02 |
| 78 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 2.90E-02 |
| 79 | GO:0008236: serine-type peptidase activity | 3.01E-02 |
| 80 | GO:0016491: oxidoreductase activity | 3.08E-02 |
| 81 | GO:0015238: drug transmembrane transporter activity | 3.23E-02 |
| 82 | GO:0004222: metalloendopeptidase activity | 3.35E-02 |
| 83 | GO:0003729: mRNA binding | 3.68E-02 |
| 84 | GO:0003993: acid phosphatase activity | 3.81E-02 |
| 85 | GO:0030246: carbohydrate binding | 4.00E-02 |
| 86 | GO:0004185: serine-type carboxypeptidase activity | 4.42E-02 |
| 87 | GO:0051537: 2 iron, 2 sulfur cluster binding | 4.68E-02 |
| 88 | GO:0005198: structural molecule activity | 4.80E-02 |
| 89 | GO:0015293: symporter activity | 4.80E-02 |
| 90 | GO:0004871: signal transducer activity | 4.82E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
| 2 | GO:0098572: stromal side of plastid thylakoid membrane | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 1.12E-28 |
| 4 | GO:0009570: chloroplast stroma | 9.85E-23 |
| 5 | GO:0009534: chloroplast thylakoid | 2.34E-21 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 3.26E-19 |
| 7 | GO:0009941: chloroplast envelope | 8.86E-17 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 1.64E-13 |
| 9 | GO:0031977: thylakoid lumen | 1.41E-07 |
| 10 | GO:0009579: thylakoid | 2.00E-07 |
| 11 | GO:0009505: plant-type cell wall | 7.18E-07 |
| 12 | GO:0009533: chloroplast stromal thylakoid | 1.92E-06 |
| 13 | GO:0048046: apoplast | 3.06E-06 |
| 14 | GO:0016020: membrane | 3.41E-06 |
| 15 | GO:0005618: cell wall | 1.07E-04 |
| 16 | GO:0043674: columella | 2.02E-04 |
| 17 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 2.02E-04 |
| 18 | GO:0009344: nitrite reductase complex [NAD(P)H] | 2.02E-04 |
| 19 | GO:0010287: plastoglobule | 3.42E-04 |
| 20 | GO:0030095: chloroplast photosystem II | 6.01E-04 |
| 21 | GO:0010007: magnesium chelatase complex | 7.36E-04 |
| 22 | GO:0009531: secondary cell wall | 1.05E-03 |
| 23 | GO:0005775: vacuolar lumen | 1.05E-03 |
| 24 | GO:0042807: central vacuole | 3.09E-03 |
| 25 | GO:0009986: cell surface | 3.09E-03 |
| 26 | GO:0042644: chloroplast nucleoid | 4.65E-03 |
| 27 | GO:0045298: tubulin complex | 4.65E-03 |
| 28 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 4.65E-03 |
| 29 | GO:0005840: ribosome | 6.47E-03 |
| 30 | GO:0000311: plastid large ribosomal subunit | 7.04E-03 |
| 31 | GO:0032040: small-subunit processome | 7.04E-03 |
| 32 | GO:0009508: plastid chromosome | 7.70E-03 |
| 33 | GO:0030076: light-harvesting complex | 9.07E-03 |
| 34 | GO:0042651: thylakoid membrane | 1.13E-02 |
| 35 | GO:0009654: photosystem II oxygen evolving complex | 1.13E-02 |
| 36 | GO:0009706: chloroplast inner membrane | 1.16E-02 |
| 37 | GO:0009522: photosystem I | 1.80E-02 |
| 38 | GO:0009523: photosystem II | 1.89E-02 |
| 39 | GO:0019898: extrinsic component of membrane | 1.89E-02 |
| 40 | GO:0005887: integral component of plasma membrane | 1.98E-02 |
| 41 | GO:0009705: plant-type vacuole membrane | 2.01E-02 |
| 42 | GO:0009295: nucleoid | 2.38E-02 |
| 43 | GO:0010319: stromule | 2.38E-02 |
| 44 | GO:0009707: chloroplast outer membrane | 3.12E-02 |
| 45 | GO:0000325: plant-type vacuole | 3.46E-02 |
| 46 | GO:0015934: large ribosomal subunit | 3.46E-02 |
| 47 | GO:0031969: chloroplast membrane | 3.86E-02 |
| 48 | GO:0031902: late endosome membrane | 4.18E-02 |