Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G13060

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006858: extracellular transport0.00E+00
2GO:0080034: host response to induction by symbiont of tumor, nodule or growth in host0.00E+00
3GO:0030581: symbiont intracellular protein transport in host0.00E+00
4GO:0043462: regulation of ATPase activity0.00E+00
5GO:0009991: response to extracellular stimulus0.00E+00
6GO:0080169: cellular response to boron-containing substance deprivation0.00E+00
7GO:0001676: long-chain fatty acid metabolic process2.38E-06
8GO:0006644: phospholipid metabolic process3.06E-05
9GO:0006098: pentose-phosphate shunt4.89E-05
10GO:0080173: male-female gamete recognition during double fertilization6.74E-05
11GO:0010265: SCF complex assembly6.74E-05
12GO:0048455: stamen formation6.74E-05
13GO:0046167: glycerol-3-phosphate biosynthetic process6.74E-05
14GO:0000266: mitochondrial fission9.94E-05
15GO:0051707: response to other organism1.09E-04
16GO:0048366: leaf development1.42E-04
17GO:0019521: D-gluconate metabolic process1.62E-04
18GO:0019374: galactolipid metabolic process1.62E-04
19GO:0051788: response to misfolded protein1.62E-04
20GO:0009156: ribonucleoside monophosphate biosynthetic process1.62E-04
21GO:0071395: cellular response to jasmonic acid stimulus1.62E-04
22GO:0006641: triglyceride metabolic process1.62E-04
23GO:0006511: ubiquitin-dependent protein catabolic process1.96E-04
24GO:0009651: response to salt stress2.08E-04
25GO:0006556: S-adenosylmethionine biosynthetic process2.75E-04
26GO:0019563: glycerol catabolic process2.75E-04
27GO:0006072: glycerol-3-phosphate metabolic process3.98E-04
28GO:1901000: regulation of response to salt stress3.98E-04
29GO:0010363: regulation of plant-type hypersensitive response5.32E-04
30GO:0042991: transcription factor import into nucleus5.32E-04
31GO:0010188: response to microbial phytotoxin5.32E-04
32GO:0009165: nucleotide biosynthetic process5.32E-04
33GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione8.23E-04
34GO:0006574: valine catabolic process8.23E-04
35GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly8.23E-04
36GO:0043248: proteasome assembly8.23E-04
37GO:0070814: hydrogen sulfide biosynthetic process8.23E-04
38GO:0009094: L-phenylalanine biosynthetic process9.79E-04
39GO:0010043: response to zinc ion9.93E-04
40GO:0009867: jasmonic acid mediated signaling pathway1.08E-03
41GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway1.14E-03
42GO:0015937: coenzyme A biosynthetic process1.14E-03
43GO:0010038: response to metal ion1.14E-03
44GO:0048528: post-embryonic root development1.14E-03
45GO:0071446: cellular response to salicylic acid stimulus1.14E-03
46GO:0006631: fatty acid metabolic process1.28E-03
47GO:0043068: positive regulation of programmed cell death1.32E-03
48GO:0006102: isocitrate metabolic process1.32E-03
49GO:0016559: peroxisome fission1.32E-03
50GO:0030968: endoplasmic reticulum unfolded protein response1.50E-03
51GO:0006855: drug transmembrane transport1.60E-03
52GO:0006607: NLS-bearing protein import into nucleus1.69E-03
53GO:2000280: regulation of root development1.89E-03
54GO:0016310: phosphorylation2.01E-03
55GO:0006896: Golgi to vacuole transport2.10E-03
56GO:0000103: sulfate assimilation2.10E-03
57GO:0072593: reactive oxygen species metabolic process2.31E-03
58GO:0009873: ethylene-activated signaling pathway2.75E-03
59GO:0002237: response to molecule of bacterial origin2.99E-03
60GO:0009887: animal organ morphogenesis2.99E-03
61GO:0010053: root epidermal cell differentiation3.23E-03
62GO:0007031: peroxisome organization3.23E-03
63GO:0009116: nucleoside metabolic process3.73E-03
64GO:0031408: oxylipin biosynthetic process4.26E-03
65GO:0010150: leaf senescence4.48E-03
66GO:0006730: one-carbon metabolic process4.53E-03
67GO:0030433: ubiquitin-dependent ERAD pathway4.53E-03
68GO:0009693: ethylene biosynthetic process4.81E-03
69GO:0019722: calcium-mediated signaling5.09E-03
70GO:0009617: response to bacterium5.34E-03
71GO:0010087: phloem or xylem histogenesis5.68E-03
72GO:0010118: stomatal movement5.68E-03
73GO:0010154: fruit development5.98E-03
74GO:0042752: regulation of circadian rhythm6.28E-03
75GO:0009791: post-embryonic development6.60E-03
76GO:0048825: cotyledon development6.60E-03
77GO:0010193: response to ozone6.91E-03
78GO:0030163: protein catabolic process7.57E-03
79GO:0071281: cellular response to iron ion7.57E-03
80GO:0007049: cell cycle7.72E-03
81GO:0006464: cellular protein modification process7.90E-03
82GO:0080167: response to karrikin8.57E-03
83GO:0016579: protein deubiquitination8.59E-03
84GO:0009911: positive regulation of flower development8.93E-03
85GO:0010029: regulation of seed germination9.29E-03
86GO:0009788: negative regulation of abscisic acid-activated signaling pathway9.29E-03
87GO:0006974: cellular response to DNA damage stimulus9.65E-03
88GO:0006888: ER to Golgi vesicle-mediated transport1.00E-02
89GO:0048573: photoperiodism, flowering1.00E-02
90GO:0006886: intracellular protein transport1.06E-02
91GO:0009817: defense response to fungus, incompatible interaction1.08E-02
92GO:0048767: root hair elongation1.11E-02
93GO:0048527: lateral root development1.19E-02
94GO:0016042: lipid catabolic process1.23E-02
95GO:0009408: response to heat1.27E-02
96GO:0006099: tricarboxylic acid cycle1.31E-02
97GO:0048364: root development1.32E-02
98GO:0008152: metabolic process1.40E-02
99GO:0006897: endocytosis1.44E-02
100GO:0008283: cell proliferation1.52E-02
101GO:0009744: response to sucrose1.52E-02
102GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.74E-02
103GO:0009736: cytokinin-activated signaling pathway1.88E-02
104GO:0051603: proteolysis involved in cellular protein catabolic process1.93E-02
105GO:0048367: shoot system development2.17E-02
106GO:0016569: covalent chromatin modification2.31E-02
107GO:0009611: response to wounding2.31E-02
108GO:0009624: response to nematode2.42E-02
109GO:0006396: RNA processing2.47E-02
110GO:0007165: signal transduction2.55E-02
111GO:0055085: transmembrane transport2.86E-02
112GO:0009845: seed germination3.00E-02
113GO:0016036: cellular response to phosphate starvation3.39E-02
114GO:0040008: regulation of growth3.45E-02
115GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process3.86E-02
116GO:0007166: cell surface receptor signaling pathway3.92E-02
117GO:0010468: regulation of gene expression4.04E-02
118GO:0006979: response to oxidative stress4.58E-02
119GO:0006355: regulation of transcription, DNA-templated4.71E-02
RankGO TermAdjusted P value
1GO:0004370: glycerol kinase activity0.00E+00
2GO:0031593: polyubiquitin binding1.18E-05
3GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity1.69E-05
4GO:0005524: ATP binding9.54E-05
5GO:0005515: protein binding1.25E-04
6GO:0043141: ATP-dependent 5'-3' DNA helicase activity1.62E-04
7GO:0019200: carbohydrate kinase activity1.62E-04
8GO:0004450: isocitrate dehydrogenase (NADP+) activity1.62E-04
9GO:0008517: folic acid transporter activity1.62E-04
10GO:0004594: pantothenate kinase activity1.62E-04
11GO:0004871: signal transducer activity2.29E-04
12GO:0004781: sulfate adenylyltransferase (ATP) activity2.75E-04
13GO:0016805: dipeptidase activity2.75E-04
14GO:0004478: methionine adenosyltransferase activity2.75E-04
15GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity2.75E-04
16GO:0001653: peptide receptor activity3.98E-04
17GO:0004416: hydroxyacylglutathione hydrolase activity3.98E-04
18GO:0004749: ribose phosphate diphosphokinase activity3.98E-04
19GO:0008276: protein methyltransferase activity3.98E-04
20GO:0004301: epoxide hydrolase activity5.32E-04
21GO:0047769: arogenate dehydratase activity5.32E-04
22GO:0004664: prephenate dehydratase activity5.32E-04
23GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen6.73E-04
24GO:0047714: galactolipase activity8.23E-04
25GO:0036402: proteasome-activating ATPase activity8.23E-04
26GO:0102391: decanoate--CoA ligase activity9.79E-04
27GO:0008113: peptide-methionine (S)-S-oxide reductase activity9.79E-04
28GO:0004620: phospholipase activity1.14E-03
29GO:0004467: long-chain fatty acid-CoA ligase activity1.14E-03
30GO:0004143: diacylglycerol kinase activity1.14E-03
31GO:0008235: metalloexopeptidase activity1.14E-03
32GO:0102425: myricetin 3-O-glucosyltransferase activity1.14E-03
33GO:0102360: daphnetin 3-O-glucosyltransferase activity1.14E-03
34GO:0047893: flavonol 3-O-glucosyltransferase activity1.32E-03
35GO:0035064: methylated histone binding1.32E-03
36GO:0008970: phosphatidylcholine 1-acylhydrolase activity1.50E-03
37GO:0003951: NAD+ kinase activity1.50E-03
38GO:0051287: NAD binding1.66E-03
39GO:0003678: DNA helicase activity1.69E-03
40GO:0047617: acyl-CoA hydrolase activity1.89E-03
41GO:0003924: GTPase activity1.99E-03
42GO:0004713: protein tyrosine kinase activity2.10E-03
43GO:0008171: O-methyltransferase activity2.10E-03
44GO:0004177: aminopeptidase activity2.31E-03
45GO:0008559: xenobiotic-transporting ATPase activity2.31E-03
46GO:0008139: nuclear localization sequence binding2.76E-03
47GO:0031072: heat shock protein binding2.76E-03
48GO:0017025: TBP-class protein binding3.23E-03
49GO:0043424: protein histidine kinase binding3.99E-03
50GO:0035251: UDP-glucosyltransferase activity4.26E-03
51GO:0036459: thiol-dependent ubiquitinyl hydrolase activity4.26E-03
52GO:0004298: threonine-type endopeptidase activity4.26E-03
53GO:0008017: microtubule binding4.68E-03
54GO:0008194: UDP-glycosyltransferase activity5.00E-03
55GO:0042626: ATPase activity, coupled to transmembrane movement of substances5.68E-03
56GO:0000287: magnesium ion binding6.78E-03
57GO:0004843: thiol-dependent ubiquitin-specific protease activity6.91E-03
58GO:0004197: cysteine-type endopeptidase activity7.24E-03
59GO:0016597: amino acid binding8.59E-03
60GO:0051213: dioxygenase activity8.93E-03
61GO:0004806: triglyceride lipase activity1.00E-02
62GO:0015238: drug transmembrane transporter activity1.11E-02
63GO:0030145: manganese ion binding1.19E-02
64GO:0004712: protein serine/threonine/tyrosine kinase activity1.35E-02
65GO:0031625: ubiquitin protein ligase binding2.02E-02
66GO:0080043: quercetin 3-O-glucosyltransferase activity2.26E-02
67GO:0080044: quercetin 7-O-glucosyltransferase activity2.26E-02
68GO:0004674: protein serine/threonine kinase activity2.32E-02
69GO:0051082: unfolded protein binding2.42E-02
70GO:0016746: transferase activity, transferring acyl groups2.47E-02
71GO:0016758: transferase activity, transferring hexosyl groups2.78E-02
72GO:0008565: protein transporter activity3.22E-02
73GO:0015297: antiporter activity3.45E-02
74GO:0005525: GTP binding3.71E-02
75GO:0004601: peroxidase activity4.86E-02
RankGO TermAdjusted P value
1GO:0019822: P4 peroxisome0.00E+00
2GO:0005829: cytosol3.78E-10
3GO:0008540: proteasome regulatory particle, base subcomplex5.97E-05
4GO:0031972: chloroplast intermembrane space6.74E-05
5GO:0005777: peroxisome1.40E-04
6GO:0000502: proteasome complex1.66E-04
7GO:0005834: heterotrimeric G-protein complex2.29E-04
8GO:0031461: cullin-RING ubiquitin ligase complex3.98E-04
9GO:0030127: COPII vesicle coat8.23E-04
10GO:0031597: cytosolic proteasome complex9.79E-04
11GO:0000794: condensed nuclear chromosome1.14E-03
12GO:0031595: nuclear proteasome complex1.14E-03
13GO:0009524: phragmoplast3.43E-03
14GO:0005737: cytoplasm3.61E-03
15GO:0005839: proteasome core complex4.26E-03
16GO:0009506: plasmodesma4.44E-03
17GO:0030136: clathrin-coated vesicle5.38E-03
18GO:0005886: plasma membrane5.39E-03
19GO:0080008: Cul4-RING E3 ubiquitin ligase complex7.58E-03
20GO:0030529: intracellular ribonucleoprotein complex8.93E-03
21GO:0000151: ubiquitin ligase complex1.08E-02
22GO:0005643: nuclear pore1.08E-02
23GO:0000325: plant-type vacuole1.19E-02
24GO:0005819: spindle1.35E-02
25GO:0005774: vacuolar membrane1.37E-02
26GO:0005773: vacuole2.59E-02
27GO:0005654: nucleoplasm2.78E-02
28GO:0009570: chloroplast stroma3.53E-02
29GO:0005783: endoplasmic reticulum3.86E-02
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Gene type



Gene DE type