co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G12230

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006642: triglyceride mobilization	0.00E+00
2	GO:0046322: negative regulation of fatty acid oxidation	0.00E+00
3	GO:2000042: negative regulation of double-strand break repair via homologous recombination	0.00E+00
4	GO:0007638: mechanosensory behavior	0.00E+00
5	GO:0042493: response to drug	0.00E+00
6	GO:1905499: trichome papilla formation	0.00E+00
7	GO:0006399: tRNA metabolic process	0.00E+00
8	GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate	0.00E+00
9	GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation	0.00E+00
10	GO:0033494: ferulate metabolic process	0.00E+00
11	GO:0010411: xyloglucan metabolic process	1.14E-06
12	GO:0006633: fatty acid biosynthetic process	1.60E-06
13	GO:0071555: cell wall organization	1.29E-05
14	GO:0032544: plastid translation	3.21E-05
15	GO:0042335: cuticle development	5.34E-05
16	GO:0042546: cell wall biogenesis	9.10E-05
17	GO:0006869: lipid transport	2.92E-04
18	GO:0016051: carbohydrate biosynthetic process	4.15E-04
19	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	4.40E-04
20	GO:0046520: sphingoid biosynthetic process	4.59E-04
21	GO:0043266: regulation of potassium ion transport	4.59E-04
22	GO:0006824: cobalt ion transport	4.59E-04
23	GO:0046166: glyceraldehyde-3-phosphate biosynthetic process	4.59E-04
24	GO:0042371: vitamin K biosynthetic process	4.59E-04
25	GO:2000021: regulation of ion homeostasis	4.59E-04
26	GO:0043007: maintenance of rDNA	4.59E-04
27	GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway	4.59E-04
28	GO:0071588: hydrogen peroxide mediated signaling pathway	4.59E-04
29	GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process	4.59E-04
30	GO:0070509: calcium ion import	4.59E-04
31	GO:0007263: nitric oxide mediated signal transduction	4.59E-04
32	GO:0005980: glycogen catabolic process	4.59E-04
33	GO:0034220: ion transmembrane transport	6.02E-04
34	GO:0045717: negative regulation of fatty acid biosynthetic process	9.90E-04
35	GO:0034755: iron ion transmembrane transport	9.90E-04
36	GO:0060919: auxin influx	9.90E-04
37	GO:0042776: mitochondrial ATP synthesis coupled proton transport	9.90E-04
38	GO:0010289: homogalacturonan biosynthetic process	9.90E-04
39	GO:0010198: synergid death	9.90E-04
40	GO:0009828: plant-type cell wall loosening	1.10E-03
41	GO:0016042: lipid catabolic process	1.38E-03
42	GO:1901562: response to paraquat	1.61E-03
43	GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition	1.61E-03
44	GO:0045493: xylan catabolic process	1.61E-03
45	GO:2001295: malonyl-CoA biosynthetic process	1.61E-03
46	GO:0032504: multicellular organism reproduction	1.61E-03
47	GO:0019563: glycerol catabolic process	1.61E-03
48	GO:0042254: ribosome biogenesis	1.90E-03
49	GO:0010207: photosystem II assembly	1.92E-03
50	GO:0010731: protein glutathionylation	2.34E-03
51	GO:0006424: glutamyl-tRNA aminoacylation	2.34E-03
52	GO:0050482: arachidonic acid secretion	2.34E-03
53	GO:2001141: regulation of RNA biosynthetic process	2.34E-03
54	GO:0007231: osmosensory signaling pathway	2.34E-03
55	GO:0051639: actin filament network formation	2.34E-03
56	GO:0009152: purine ribonucleotide biosynthetic process	2.34E-03
57	GO:0046653: tetrahydrofolate metabolic process	2.34E-03
58	GO:0009052: pentose-phosphate shunt, non-oxidative branch	2.34E-03
59	GO:0009650: UV protection	2.34E-03
60	GO:0010306: rhamnogalacturonan II biosynthetic process	2.34E-03
61	GO:0080170: hydrogen peroxide transmembrane transport	2.34E-03
62	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	2.34E-03
63	GO:0006833: water transport	2.39E-03
64	GO:0051017: actin filament bundle assembly	2.66E-03
65	GO:0019344: cysteine biosynthetic process	2.66E-03
66	GO:0007017: microtubule-based process	2.93E-03
67	GO:0051764: actin crosslink formation	3.14E-03
68	GO:0006183: GTP biosynthetic process	3.14E-03
69	GO:0030104: water homeostasis	3.14E-03
70	GO:0033500: carbohydrate homeostasis	3.14E-03
71	GO:0006631: fatty acid metabolic process	3.25E-03
72	GO:0032543: mitochondrial translation	4.03E-03
73	GO:0010236: plastoquinone biosynthetic process	4.03E-03
74	GO:0045038: protein import into chloroplast thylakoid membrane	4.03E-03
75	GO:0006665: sphingolipid metabolic process	4.03E-03
76	GO:0000304: response to singlet oxygen	4.03E-03
77	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	4.54E-03
78	GO:0009664: plant-type cell wall organization	4.83E-03
79	GO:0080022: primary root development	4.91E-03
80	GO:0000413: protein peptidyl-prolyl isomerization	4.91E-03
81	GO:0006014: D-ribose metabolic process	4.99E-03
82	GO:0006751: glutathione catabolic process	4.99E-03
83	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	4.99E-03
84	GO:0010190: cytochrome b6f complex assembly	4.99E-03
85	GO:0010019: chloroplast-nucleus signaling pathway	6.02E-03
86	GO:0010555: response to mannitol	6.02E-03
87	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	6.02E-03
88	GO:0042372: phylloquinone biosynthetic process	6.02E-03
89	GO:0009612: response to mechanical stimulus	6.02E-03
90	GO:0071554: cell wall organization or biogenesis	6.55E-03
91	GO:0010583: response to cyclopentenone	7.00E-03
92	GO:0009826: unidimensional cell growth	7.06E-03
93	GO:0009645: response to low light intensity stimulus	7.11E-03
94	GO:0010444: guard mother cell differentiation	7.11E-03
95	GO:0009772: photosynthetic electron transport in photosystem II	7.11E-03
96	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	7.11E-03
97	GO:0009658: chloroplast organization	7.48E-03
98	GO:0009642: response to light intensity	8.28E-03
99	GO:0006644: phospholipid metabolic process	8.28E-03
100	GO:0010027: thylakoid membrane organization	9.50E-03
101	GO:0017004: cytochrome complex assembly	9.51E-03
102	GO:0009932: cell tip growth	9.51E-03
103	GO:0071482: cellular response to light stimulus	9.51E-03
104	GO:0006754: ATP biosynthetic process	1.08E-02
105	GO:0010206: photosystem II repair	1.08E-02
106	GO:0015995: chlorophyll biosynthetic process	1.12E-02
107	GO:0042761: very long-chain fatty acid biosynthetic process	1.22E-02
108	GO:0009735: response to cytokinin	1.24E-02
109	GO:0009870: defense response signaling pathway, resistance gene-dependent	1.36E-02
110	GO:0006535: cysteine biosynthetic process from serine	1.36E-02
111	GO:0019538: protein metabolic process	1.36E-02
112	GO:0043069: negative regulation of programmed cell death	1.36E-02
113	GO:0048829: root cap development	1.36E-02
114	GO:0006949: syncytium formation	1.36E-02
115	GO:0007568: aging	1.44E-02
116	GO:0006415: translational termination	1.50E-02
117	GO:0006352: DNA-templated transcription, initiation	1.50E-02
118	GO:0030148: sphingolipid biosynthetic process	1.50E-02
119	GO:0009684: indoleacetic acid biosynthetic process	1.50E-02
120	GO:0000038: very long-chain fatty acid metabolic process	1.50E-02
121	GO:0006816: calcium ion transport	1.50E-02
122	GO:0005975: carbohydrate metabolic process	1.57E-02
123	GO:0009414: response to water deprivation	1.72E-02
124	GO:0006094: gluconeogenesis	1.81E-02
125	GO:0019253: reductive pentose-phosphate cycle	1.98E-02
126	GO:0009266: response to temperature stimulus	1.98E-02
127	GO:0010143: cutin biosynthetic process	1.98E-02
128	GO:0010114: response to red light	2.04E-02
129	GO:0010030: positive regulation of seed germination	2.14E-02
130	GO:0070588: calcium ion transmembrane transport	2.14E-02
131	GO:0009969: xyloglucan biosynthetic process	2.14E-02
132	GO:0009644: response to high light intensity	2.21E-02
133	GO:0010025: wax biosynthetic process	2.32E-02
134	GO:0045333: cellular respiration	2.49E-02
135	GO:0000027: ribosomal large subunit assembly	2.49E-02
136	GO:0042538: hyperosmotic salinity response	2.57E-02
137	GO:0003333: amino acid transmembrane transport	2.86E-02
138	GO:0016998: cell wall macromolecule catabolic process	2.86E-02
139	GO:0048511: rhythmic process	2.86E-02
140	GO:0010431: seed maturation	2.86E-02
141	GO:0031408: oxylipin biosynthetic process	2.86E-02
142	GO:0031348: negative regulation of defense response	3.05E-02
143	GO:0009860: pollen tube growth	3.17E-02
144	GO:0009411: response to UV	3.25E-02
145	GO:0006012: galactose metabolic process	3.25E-02
146	GO:0006096: glycolytic process	3.26E-02
147	GO:0007049: cell cycle	3.32E-02
148	GO:0042127: regulation of cell proliferation	3.45E-02
149	GO:0019722: calcium-mediated signaling	3.45E-02
150	GO:0009306: protein secretion	3.45E-02
151	GO:0010091: trichome branching	3.45E-02
152	GO:0016117: carotenoid biosynthetic process	3.65E-02
153	GO:0070417: cellular response to cold	3.65E-02
154	GO:0042391: regulation of membrane potential	3.86E-02
155	GO:0000271: polysaccharide biosynthetic process	3.86E-02
156	GO:0042631: cellular response to water deprivation	3.86E-02
157	GO:0009624: response to nematode	3.91E-02
158	GO:0010305: leaf vascular tissue pattern formation	4.07E-02
159	GO:0048868: pollen tube development	4.07E-02
160	GO:0045489: pectin biosynthetic process	4.07E-02
161	GO:0051726: regulation of cell cycle	4.15E-02
162	GO:0015986: ATP synthesis coupled proton transport	4.28E-02
163	GO:0042752: regulation of circadian rhythm	4.28E-02
164	GO:0015979: photosynthesis	4.44E-02
165	GO:0019252: starch biosynthetic process	4.50E-02
166	GO:0045454: cell redox homeostasis	4.71E-02
167	GO:0000302: response to reactive oxygen species	4.72E-02
168	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	4.72E-02
169	GO:0045892: negative regulation of transcription, DNA-templated	4.80E-02
170	GO:0007264: small GTPase mediated signal transduction	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00E+00
2	GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity	0.00E+00
3	GO:0080176: xyloglucan 1,6-alpha-xylosidase activity	0.00E+00
4	GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity	0.00E+00
5	GO:0019146: arabinose-5-phosphate isomerase activity	0.00E+00
6	GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity	0.00E+00
7	GO:0005048: signal sequence binding	0.00E+00
8	GO:0005222: intracellular cAMP activated cation channel activity	0.00E+00
9	GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity	0.00E+00
10	GO:0047513: 1,2-alpha-L-fucosidase activity	0.00E+00
11	GO:0061634: alpha-D-xyloside xylohydrolase	0.00E+00
12	GO:0016631: enoyl-[acyl-carrier-protein] reductase activity	0.00E+00
13	GO:0043864: indoleacetamide hydrolase activity	0.00E+00
14	GO:0050613: delta14-sterol reductase activity	0.00E+00
15	GO:0016762: xyloglucan:xyloglucosyl transferase activity	5.44E-06
16	GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	9.31E-06
17	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.10E-05
18	GO:0016788: hydrolase activity, acting on ester bonds	1.21E-05
19	GO:0005528: FK506 binding	1.50E-05
20	GO:0016798: hydrolase activity, acting on glycosyl bonds	2.11E-05
21	GO:0008289: lipid binding	4.40E-05
22	GO:0019843: rRNA binding	7.73E-05
23	GO:0052689: carboxylic ester hydrolase activity	1.91E-04
24	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.34E-04
25	GO:0004328: formamidase activity	4.59E-04
26	GO:0005221: intracellular cyclic nucleotide activated cation channel activity	4.59E-04
27	GO:0000170: sphingosine hydroxylase activity	4.59E-04
28	GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity	4.59E-04
29	GO:0004560: alpha-L-fucosidase activity	4.59E-04
30	GO:0004807: triose-phosphate isomerase activity	4.59E-04
31	GO:0008184: glycogen phosphorylase activity	4.59E-04
32	GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	4.59E-04
33	GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity	4.59E-04
34	GO:0052631: sphingolipid delta-8 desaturase activity	4.59E-04
35	GO:0080132: fatty acid alpha-hydroxylase activity	4.59E-04
36	GO:0004645: phosphorylase activity	4.59E-04
37	GO:0003839: gamma-glutamylcyclotransferase activity	9.90E-04
38	GO:0003938: IMP dehydrogenase activity	9.90E-04
39	GO:0042284: sphingolipid delta-4 desaturase activity	9.90E-04
40	GO:0015250: water channel activity	1.37E-03
41	GO:0008378: galactosyltransferase activity	1.49E-03
42	GO:0004148: dihydrolipoyl dehydrogenase activity	1.61E-03
43	GO:0004075: biotin carboxylase activity	1.61E-03
44	GO:0004751: ribose-5-phosphate isomerase activity	1.61E-03
45	GO:0045174: glutathione dehydrogenase (ascorbate) activity	1.61E-03
46	GO:0030267: glyoxylate reductase (NADP) activity	1.61E-03
47	GO:0016742: hydroxymethyl-, formyl- and related transferase activity	1.61E-03
48	GO:0008864: formyltetrahydrofolate deformylase activity	1.61E-03
49	GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity	1.61E-03
50	GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity	1.61E-03
51	GO:0070330: aromatase activity	1.61E-03
52	GO:0005504: fatty acid binding	1.61E-03
53	GO:0050734: hydroxycinnamoyltransferase activity	1.61E-03
54	GO:0005262: calcium channel activity	1.70E-03
55	GO:0016149: translation release factor activity, codon specific	2.34E-03
56	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	2.34E-03
57	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	2.34E-03
58	GO:0016851: magnesium chelatase activity	2.34E-03
59	GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity	2.34E-03
60	GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity	2.34E-03
61	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	2.39E-03
62	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	2.39E-03
63	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	2.39E-03
64	GO:0004857: enzyme inhibitor activity	2.66E-03
65	GO:0046556: alpha-L-arabinofuranosidase activity	3.14E-03
66	GO:0004659: prenyltransferase activity	3.14E-03
67	GO:0001053: plastid sigma factor activity	3.14E-03
68	GO:0016836: hydro-lyase activity	3.14E-03
69	GO:0016987: sigma factor activity	3.14E-03
70	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	3.14E-03
71	GO:0045430: chalcone isomerase activity	3.14E-03
72	GO:0010328: auxin influx transmembrane transporter activity	3.14E-03
73	GO:0009044: xylan 1,4-beta-xylosidase activity	3.14E-03
74	GO:0052793: pectin acetylesterase activity	3.14E-03
75	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	3.53E-03
76	GO:0004623: phospholipase A2 activity	4.03E-03
77	GO:0018685: alkane 1-monooxygenase activity	4.03E-03
78	GO:0004040: amidase activity	4.03E-03
79	GO:0003989: acetyl-CoA carboxylase activity	4.03E-03
80	GO:0009922: fatty acid elongase activity	4.03E-03
81	GO:0004130: cytochrome-c peroxidase activity	4.99E-03
82	GO:0016688: L-ascorbate peroxidase activity	4.99E-03
83	GO:0008200: ion channel inhibitor activity	4.99E-03
84	GO:0080030: methyl indole-3-acetate esterase activity	4.99E-03
85	GO:0004629: phospholipase C activity	4.99E-03
86	GO:0004747: ribokinase activity	6.02E-03
87	GO:0005261: cation channel activity	6.02E-03
88	GO:0004435: phosphatidylinositol phospholipase C activity	6.02E-03
89	GO:0005242: inward rectifier potassium channel activity	6.02E-03
90	GO:0004124: cysteine synthase activity	6.02E-03
91	GO:0051920: peroxiredoxin activity	6.02E-03
92	GO:0051753: mannan synthase activity	6.02E-03
93	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	6.02E-03
94	GO:0019901: protein kinase binding	6.12E-03
95	GO:0043295: glutathione binding	7.11E-03
96	GO:0004650: polygalacturonase activity	7.40E-03
97	GO:0051015: actin filament binding	7.47E-03
98	GO:0004033: aldo-keto reductase (NADP) activity	8.28E-03
99	GO:0008865: fructokinase activity	8.28E-03
100	GO:0016209: antioxidant activity	8.28E-03
101	GO:0008312: 7S RNA binding	8.28E-03
102	GO:0004034: aldose 1-epimerase activity	8.28E-03
103	GO:0005200: structural constituent of cytoskeleton	8.45E-03
104	GO:0016413: O-acetyltransferase activity	8.97E-03
105	GO:0015078: hydrogen ion transmembrane transporter activity	9.51E-03
106	GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism	1.08E-02
107	GO:0003747: translation release factor activity	1.08E-02
108	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	1.08E-02
109	GO:0016491: oxidoreductase activity	1.17E-02
110	GO:0047617: acyl-CoA hydrolase activity	1.22E-02
111	GO:0005381: iron ion transmembrane transporter activity	1.22E-02
112	GO:0015020: glucuronosyltransferase activity	1.36E-02
113	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	1.37E-02
114	GO:0004871: signal transducer activity	1.46E-02
115	GO:0004364: glutathione transferase activity	1.96E-02
116	GO:0030552: cAMP binding	2.14E-02
117	GO:0030553: cGMP binding	2.14E-02
118	GO:0005215: transporter activity	2.17E-02
119	GO:0015293: symporter activity	2.30E-02
120	GO:0005216: ion channel activity	2.67E-02
121	GO:0003735: structural constituent of ribosome	2.75E-02
122	GO:0005516: calmodulin binding	2.90E-02
123	GO:0030570: pectate lyase activity	3.25E-02
124	GO:0008514: organic anion transmembrane transporter activity	3.45E-02
125	GO:0030551: cyclic nucleotide binding	3.86E-02
126	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	4.07E-02
127	GO:0003713: transcription coactivator activity	4.07E-02
128	GO:0016853: isomerase activity	4.28E-02
129	GO:0016758: transferase activity, transferring hexosyl groups	4.76E-02

Rank	GO Term	Adjusted P value
1	GO:0005835: fatty acid synthase complex	0.00E+00
2	GO:0009507: chloroplast	1.97E-17
3	GO:0009570: chloroplast stroma	8.79E-16
4	GO:0009543: chloroplast thylakoid lumen	8.62E-15
5	GO:0031977: thylakoid lumen	5.07E-13
6	GO:0009941: chloroplast envelope	1.15E-11
7	GO:0048046: apoplast	3.57E-11
8	GO:0031225: anchored component of membrane	1.00E-10
9	GO:0009579: thylakoid	1.41E-10
10	GO:0005618: cell wall	5.30E-10
11	GO:0046658: anchored component of plasma membrane	3.29E-09
12	GO:0009535: chloroplast thylakoid membrane	6.32E-09
13	GO:0009534: chloroplast thylakoid	1.46E-08
14	GO:0009505: plant-type cell wall	2.02E-07
15	GO:0005576: extracellular region	2.05E-06
16	GO:0005886: plasma membrane	6.50E-06
17	GO:0016020: membrane	2.10E-04
18	GO:0009923: fatty acid elongase complex	4.59E-04
19	GO:0043674: columella	4.59E-04
20	GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex	4.59E-04
21	GO:0045298: tubulin complex	8.26E-04
22	GO:0045259: proton-transporting ATP synthase complex	9.90E-04
23	GO:0080085: signal recognition particle, chloroplast targeting	9.90E-04
24	GO:0009509: chromoplast	1.61E-03
25	GO:0010007: magnesium chelatase complex	1.61E-03
26	GO:0032432: actin filament bundle	2.34E-03
27	GO:0005875: microtubule associated complex	2.39E-03
28	GO:0009654: photosystem II oxygen evolving complex	2.93E-03
29	GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o)	4.99E-03
30	GO:0019898: extrinsic component of membrane	6.12E-03
31	GO:0009533: chloroplast stromal thylakoid	7.11E-03
32	GO:0042807: central vacuole	7.11E-03
33	GO:0005840: ribosome	7.15E-03
34	GO:0005887: integral component of plasma membrane	9.10E-03
35	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	9.51E-03
36	GO:0005884: actin filament	1.50E-02
37	GO:0030176: integral component of endoplasmic reticulum membrane	2.14E-02
38	GO:0043234: protein complex	2.32E-02
39	GO:0009536: plastid	2.64E-02
40	GO:0005794: Golgi apparatus	2.81E-02
41	GO:0031410: cytoplasmic vesicle	3.05E-02
42	GO:0000139: Golgi membrane	3.17E-02
43	GO:0015629: actin cytoskeleton	3.25E-02
44	GO:0031969: chloroplast membrane	3.78E-02
45	GO:0016021: integral component of membrane	3.86E-02
46	GO:0010287: plastoglobule	4.63E-02