GO Enrichment Analysis of Co-expressed Genes with
AT1G12120
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090627: plant epidermal cell differentiation | 0.00E+00 |
| 2 | GO:0006003: fructose 2,6-bisphosphate metabolic process | 0.00E+00 |
| 3 | GO:0090706: specification of plant organ position | 0.00E+00 |
| 4 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
| 5 | GO:0045176: apical protein localization | 0.00E+00 |
| 6 | GO:0015808: L-alanine transport | 5.79E-05 |
| 7 | GO:0010480: microsporocyte differentiation | 5.79E-05 |
| 8 | GO:0031338: regulation of vesicle fusion | 5.79E-05 |
| 9 | GO:0043609: regulation of carbon utilization | 5.79E-05 |
| 10 | GO:0010028: xanthophyll cycle | 5.79E-05 |
| 11 | GO:0010450: inflorescence meristem growth | 5.79E-05 |
| 12 | GO:0015969: guanosine tetraphosphate metabolic process | 5.79E-05 |
| 13 | GO:0098712: L-glutamate import across plasma membrane | 1.41E-04 |
| 14 | GO:0016122: xanthophyll metabolic process | 1.41E-04 |
| 15 | GO:0015804: neutral amino acid transport | 1.41E-04 |
| 16 | GO:0046373: L-arabinose metabolic process | 1.41E-04 |
| 17 | GO:0071230: cellular response to amino acid stimulus | 2.40E-04 |
| 18 | GO:0045493: xylan catabolic process | 2.40E-04 |
| 19 | GO:0090630: activation of GTPase activity | 2.40E-04 |
| 20 | GO:0045165: cell fate commitment | 2.40E-04 |
| 21 | GO:0006000: fructose metabolic process | 2.40E-04 |
| 22 | GO:0010305: leaf vascular tissue pattern formation | 3.13E-04 |
| 23 | GO:0048825: cotyledon development | 3.61E-04 |
| 24 | GO:0006085: acetyl-CoA biosynthetic process | 4.66E-04 |
| 25 | GO:0015994: chlorophyll metabolic process | 4.66E-04 |
| 26 | GO:0009416: response to light stimulus | 5.33E-04 |
| 27 | GO:1902183: regulation of shoot apical meristem development | 5.92E-04 |
| 28 | GO:0010158: abaxial cell fate specification | 5.92E-04 |
| 29 | GO:0048827: phyllome development | 7.24E-04 |
| 30 | GO:0042549: photosystem II stabilization | 7.24E-04 |
| 31 | GO:0000741: karyogamy | 7.24E-04 |
| 32 | GO:0009913: epidermal cell differentiation | 7.24E-04 |
| 33 | GO:1900057: positive regulation of leaf senescence | 1.01E-03 |
| 34 | GO:0051510: regulation of unidimensional cell growth | 1.01E-03 |
| 35 | GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway | 1.01E-03 |
| 36 | GO:0043090: amino acid import | 1.01E-03 |
| 37 | GO:0048437: floral organ development | 1.01E-03 |
| 38 | GO:0034968: histone lysine methylation | 1.16E-03 |
| 39 | GO:0010093: specification of floral organ identity | 1.32E-03 |
| 40 | GO:0006002: fructose 6-phosphate metabolic process | 1.32E-03 |
| 41 | GO:2000024: regulation of leaf development | 1.48E-03 |
| 42 | GO:0006754: ATP biosynthetic process | 1.48E-03 |
| 43 | GO:0048507: meristem development | 1.48E-03 |
| 44 | GO:0006629: lipid metabolic process | 1.55E-03 |
| 45 | GO:0048229: gametophyte development | 2.02E-03 |
| 46 | GO:0046856: phosphatidylinositol dephosphorylation | 2.02E-03 |
| 47 | GO:0006816: calcium ion transport | 2.02E-03 |
| 48 | GO:0010229: inflorescence development | 2.41E-03 |
| 49 | GO:0018107: peptidyl-threonine phosphorylation | 2.41E-03 |
| 50 | GO:0009718: anthocyanin-containing compound biosynthetic process | 2.41E-03 |
| 51 | GO:0010075: regulation of meristem growth | 2.41E-03 |
| 52 | GO:0010540: basipetal auxin transport | 2.62E-03 |
| 53 | GO:0009934: regulation of meristem structural organization | 2.62E-03 |
| 54 | GO:0009933: meristem structural organization | 2.62E-03 |
| 55 | GO:0080188: RNA-directed DNA methylation | 2.82E-03 |
| 56 | GO:0006636: unsaturated fatty acid biosynthetic process | 3.04E-03 |
| 57 | GO:0019762: glucosinolate catabolic process | 3.04E-03 |
| 58 | GO:0006289: nucleotide-excision repair | 3.26E-03 |
| 59 | GO:2000377: regulation of reactive oxygen species metabolic process | 3.26E-03 |
| 60 | GO:0009944: polarity specification of adaxial/abaxial axis | 3.26E-03 |
| 61 | GO:0006874: cellular calcium ion homeostasis | 3.49E-03 |
| 62 | GO:0080092: regulation of pollen tube growth | 3.95E-03 |
| 63 | GO:0009294: DNA mediated transformation | 4.20E-03 |
| 64 | GO:0015991: ATP hydrolysis coupled proton transport | 4.95E-03 |
| 65 | GO:0048653: anther development | 4.95E-03 |
| 66 | GO:0006662: glycerol ether metabolic process | 5.21E-03 |
| 67 | GO:0010197: polar nucleus fusion | 5.21E-03 |
| 68 | GO:0009741: response to brassinosteroid | 5.21E-03 |
| 69 | GO:0071472: cellular response to salt stress | 5.21E-03 |
| 70 | GO:0010154: fruit development | 5.21E-03 |
| 71 | GO:0009791: post-embryonic development | 5.75E-03 |
| 72 | GO:0009630: gravitropism | 6.31E-03 |
| 73 | GO:0071805: potassium ion transmembrane transport | 7.18E-03 |
| 74 | GO:0016126: sterol biosynthetic process | 7.78E-03 |
| 75 | GO:0009911: positive regulation of flower development | 7.78E-03 |
| 76 | GO:0045454: cell redox homeostasis | 8.40E-03 |
| 77 | GO:0015995: chlorophyll biosynthetic process | 8.71E-03 |
| 78 | GO:0006499: N-terminal protein myristoylation | 1.00E-02 |
| 79 | GO:0009910: negative regulation of flower development | 1.04E-02 |
| 80 | GO:0009631: cold acclimation | 1.04E-02 |
| 81 | GO:0048364: root development | 1.08E-02 |
| 82 | GO:0045087: innate immune response | 1.11E-02 |
| 83 | GO:0009853: photorespiration | 1.11E-02 |
| 84 | GO:0034599: cellular response to oxidative stress | 1.14E-02 |
| 85 | GO:0008152: metabolic process | 1.14E-02 |
| 86 | GO:0006631: fatty acid metabolic process | 1.25E-02 |
| 87 | GO:0009640: photomorphogenesis | 1.32E-02 |
| 88 | GO:0006855: drug transmembrane transport | 1.47E-02 |
| 89 | GO:0006364: rRNA processing | 1.63E-02 |
| 90 | GO:0006813: potassium ion transport | 1.63E-02 |
| 91 | GO:0009908: flower development | 1.67E-02 |
| 92 | GO:0009909: regulation of flower development | 1.75E-02 |
| 93 | GO:0009624: response to nematode | 2.10E-02 |
| 94 | GO:0018105: peptidyl-serine phosphorylation | 2.14E-02 |
| 95 | GO:0009742: brassinosteroid mediated signaling pathway | 2.19E-02 |
| 96 | GO:0009845: seed germination | 2.60E-02 |
| 97 | GO:0009790: embryo development | 2.75E-02 |
| 98 | GO:0006633: fatty acid biosynthetic process | 2.89E-02 |
| 99 | GO:0006413: translational initiation | 2.94E-02 |
| 100 | GO:0010150: leaf senescence | 3.09E-02 |
| 101 | GO:0006468: protein phosphorylation | 3.34E-02 |
| 102 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 3.35E-02 |
| 103 | GO:0009826: unidimensional cell growth | 4.11E-02 |
| 104 | GO:0042254: ribosome biogenesis | 4.28E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003873: 6-phosphofructo-2-kinase activity | 0.00E+00 |
| 2 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
| 3 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 4 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
| 5 | GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity | 0.00E+00 |
| 6 | GO:0050139: nicotinate-N-glucosyltransferase activity | 5.79E-05 |
| 7 | GO:0046912: transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer | 5.79E-05 |
| 8 | GO:0015194: L-serine transmembrane transporter activity | 5.79E-05 |
| 9 | GO:0008066: glutamate receptor activity | 5.79E-05 |
| 10 | GO:0008728: GTP diphosphokinase activity | 1.41E-04 |
| 11 | GO:0015180: L-alanine transmembrane transporter activity | 1.41E-04 |
| 12 | GO:0004312: fatty acid synthase activity | 1.41E-04 |
| 13 | GO:0015193: L-proline transmembrane transporter activity | 2.40E-04 |
| 14 | GO:0016805: dipeptidase activity | 2.40E-04 |
| 15 | GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity | 2.40E-04 |
| 16 | GO:0004180: carboxypeptidase activity | 2.40E-04 |
| 17 | GO:0004148: dihydrolipoyl dehydrogenase activity | 2.40E-04 |
| 18 | GO:0015186: L-glutamine transmembrane transporter activity | 3.49E-04 |
| 19 | GO:0003878: ATP citrate synthase activity | 3.49E-04 |
| 20 | GO:0019201: nucleotide kinase activity | 3.49E-04 |
| 21 | GO:0015175: neutral amino acid transmembrane transporter activity | 3.49E-04 |
| 22 | GO:0046556: alpha-L-arabinofuranosidase activity | 4.66E-04 |
| 23 | GO:0008453: alanine-glyoxylate transaminase activity | 4.66E-04 |
| 24 | GO:0005313: L-glutamate transmembrane transporter activity | 4.66E-04 |
| 25 | GO:0004506: squalene monooxygenase activity | 4.66E-04 |
| 26 | GO:0070628: proteasome binding | 4.66E-04 |
| 27 | GO:0009044: xylan 1,4-beta-xylosidase activity | 4.66E-04 |
| 28 | GO:0017137: Rab GTPase binding | 5.92E-04 |
| 29 | GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity | 7.24E-04 |
| 30 | GO:2001070: starch binding | 7.24E-04 |
| 31 | GO:0031593: polyubiquitin binding | 7.24E-04 |
| 32 | GO:0004017: adenylate kinase activity | 8.63E-04 |
| 33 | GO:0005524: ATP binding | 8.79E-04 |
| 34 | GO:0043022: ribosome binding | 1.16E-03 |
| 35 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 1.48E-03 |
| 36 | GO:0016301: kinase activity | 1.55E-03 |
| 37 | GO:0030234: enzyme regulator activity | 1.83E-03 |
| 38 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 2.02E-03 |
| 39 | GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | 2.21E-03 |
| 40 | GO:0008081: phosphoric diester hydrolase activity | 2.41E-03 |
| 41 | GO:0005262: calcium channel activity | 2.41E-03 |
| 42 | GO:0004565: beta-galactosidase activity | 2.41E-03 |
| 43 | GO:0004970: ionotropic glutamate receptor activity | 2.82E-03 |
| 44 | GO:0004190: aspartic-type endopeptidase activity | 2.82E-03 |
| 45 | GO:0005217: intracellular ligand-gated ion channel activity | 2.82E-03 |
| 46 | GO:0043130: ubiquitin binding | 3.26E-03 |
| 47 | GO:0015079: potassium ion transmembrane transporter activity | 3.49E-03 |
| 48 | GO:0033612: receptor serine/threonine kinase binding | 3.72E-03 |
| 49 | GO:0047134: protein-disulfide reductase activity | 4.69E-03 |
| 50 | GO:0018024: histone-lysine N-methyltransferase activity | 4.69E-03 |
| 51 | GO:0004791: thioredoxin-disulfide reductase activity | 5.48E-03 |
| 52 | GO:0050660: flavin adenine dinucleotide binding | 6.55E-03 |
| 53 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 6.59E-03 |
| 54 | GO:0003684: damaged DNA binding | 6.88E-03 |
| 55 | GO:0008483: transaminase activity | 7.18E-03 |
| 56 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 8.71E-03 |
| 57 | GO:0005096: GTPase activator activity | 9.69E-03 |
| 58 | GO:0015238: drug transmembrane transporter activity | 9.69E-03 |
| 59 | GO:0050897: cobalt ion binding | 1.04E-02 |
| 60 | GO:0003746: translation elongation factor activity | 1.11E-02 |
| 61 | GO:0042393: histone binding | 1.21E-02 |
| 62 | GO:0004672: protein kinase activity | 1.27E-02 |
| 63 | GO:0015293: symporter activity | 1.44E-02 |
| 64 | GO:0008289: lipid binding | 1.45E-02 |
| 65 | GO:0016298: lipase activity | 1.67E-02 |
| 66 | GO:0004674: protein serine/threonine kinase activity | 1.71E-02 |
| 67 | GO:0015171: amino acid transmembrane transporter activity | 1.75E-02 |
| 68 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 1.97E-02 |
| 69 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 1.97E-02 |
| 70 | GO:0016787: hydrolase activity | 2.05E-02 |
| 71 | GO:0015035: protein disulfide oxidoreductase activity | 2.14E-02 |
| 72 | GO:0016829: lyase activity | 2.60E-02 |
| 73 | GO:0005507: copper ion binding | 2.63E-02 |
| 74 | GO:0015297: antiporter activity | 2.99E-02 |
| 75 | GO:0005525: GTP binding | 3.04E-02 |
| 76 | GO:0008194: UDP-glycosyltransferase activity | 3.35E-02 |
| 77 | GO:0003743: translation initiation factor activity | 3.46E-02 |
| 78 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 3.67E-02 |
| 79 | GO:0042802: identical protein binding | 3.67E-02 |
| 80 | GO:0000287: magnesium ion binding | 4.17E-02 |
| 81 | GO:0008233: peptidase activity | 4.86E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005886: plasma membrane | 2.06E-05 |
| 2 | GO:0009346: citrate lyase complex | 3.49E-04 |
| 3 | GO:0030660: Golgi-associated vesicle membrane | 4.66E-04 |
| 4 | GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane | 4.66E-04 |
| 5 | GO:0009507: chloroplast | 4.94E-04 |
| 6 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 1.16E-03 |
| 7 | GO:0008180: COP9 signalosome | 1.48E-03 |
| 8 | GO:0005765: lysosomal membrane | 2.02E-03 |
| 9 | GO:0005578: proteinaceous extracellular matrix | 2.41E-03 |
| 10 | GO:0030095: chloroplast photosystem II | 2.62E-03 |
| 11 | GO:0000775: chromosome, centromeric region | 3.95E-03 |
| 12 | GO:0005770: late endosome | 5.21E-03 |
| 13 | GO:0019005: SCF ubiquitin ligase complex | 9.36E-03 |
| 14 | GO:0009505: plant-type cell wall | 1.04E-02 |
| 15 | GO:0048046: apoplast | 1.09E-02 |
| 16 | GO:0031977: thylakoid lumen | 1.25E-02 |
| 17 | GO:0000502: proteasome complex | 1.63E-02 |
| 18 | GO:0010008: endosome membrane | 1.88E-02 |
| 19 | GO:0005747: mitochondrial respiratory chain complex I | 1.88E-02 |
| 20 | GO:0012505: endomembrane system | 2.05E-02 |
| 21 | GO:0009534: chloroplast thylakoid | 2.23E-02 |
| 22 | GO:0009543: chloroplast thylakoid lumen | 2.46E-02 |
| 23 | GO:0005759: mitochondrial matrix | 2.89E-02 |