co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G10290

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0036258: multivesicular body assembly	0.00E+00
2	GO:0042430: indole-containing compound metabolic process	0.00E+00
3	GO:0006182: cGMP biosynthetic process	0.00E+00
4	GO:0043462: regulation of ATPase activity	0.00E+00
5	GO:0044794: positive regulation by host of viral process	0.00E+00
6	GO:0009617: response to bacterium	2.29E-05
7	GO:0010942: positive regulation of cell death	2.95E-05
8	GO:0006952: defense response	9.09E-05
9	GO:0010726: positive regulation of hydrogen peroxide metabolic process	1.18E-04
10	GO:0009962: regulation of flavonoid biosynthetic process	1.18E-04
11	GO:0045905: positive regulation of translational termination	2.73E-04
12	GO:0046740: transport of virus in host, cell to cell	2.73E-04
13	GO:0071395: cellular response to jasmonic acid stimulus	2.73E-04
14	GO:0045901: positive regulation of translational elongation	2.73E-04
15	GO:0010618: aerenchyma formation	2.73E-04
16	GO:0006452: translational frameshifting	2.73E-04
17	GO:0010167: response to nitrate	3.23E-04
18	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	4.52E-04
19	GO:0055074: calcium ion homeostasis	4.52E-04
20	GO:0006556: S-adenosylmethionine biosynthetic process	4.52E-04
21	GO:0009626: plant-type hypersensitive response	6.03E-04
22	GO:0002679: respiratory burst involved in defense response	6.47E-04
23	GO:0070676: intralumenal vesicle formation	6.47E-04
24	GO:0001676: long-chain fatty acid metabolic process	6.47E-04
25	GO:0048194: Golgi vesicle budding	6.47E-04
26	GO:0010071: root meristem specification	6.47E-04
27	GO:0070301: cellular response to hydrogen peroxide	6.47E-04
28	GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA	8.60E-04
29	GO:0007264: small GTPase mediated signal transduction	1.02E-03
30	GO:0000304: response to singlet oxygen	1.08E-03
31	GO:0030041: actin filament polymerization	1.08E-03
32	GO:0046283: anthocyanin-containing compound metabolic process	1.08E-03
33	GO:0006413: translational initiation	1.26E-03
34	GO:0006561: proline biosynthetic process	1.33E-03
35	GO:0006121: mitochondrial electron transport, succinate to ubiquinone	1.33E-03
36	GO:0007275: multicellular organism development	1.39E-03
37	GO:0009094: L-phenylalanine biosynthetic process	1.59E-03
38	GO:0010555: response to mannitol	1.59E-03
39	GO:0010310: regulation of hydrogen peroxide metabolic process	1.59E-03
40	GO:2000067: regulation of root morphogenesis	1.59E-03
41	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	1.87E-03
42	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	1.87E-03
43	GO:0071446: cellular response to salicylic acid stimulus	1.87E-03
44	GO:1900056: negative regulation of leaf senescence	1.87E-03
45	GO:0010078: maintenance of root meristem identity	2.16E-03
46	GO:0010492: maintenance of shoot apical meristem identity	2.16E-03
47	GO:0009061: anaerobic respiration	2.16E-03
48	GO:0007186: G-protein coupled receptor signaling pathway	2.46E-03
49	GO:0010262: somatic embryogenesis	2.46E-03
50	GO:0006367: transcription initiation from RNA polymerase II promoter	2.46E-03
51	GO:0010120: camalexin biosynthetic process	2.46E-03
52	GO:0010204: defense response signaling pathway, resistance gene-independent	2.46E-03
53	GO:0006468: protein phosphorylation	2.53E-03
54	GO:0051865: protein autoubiquitination	2.78E-03
55	GO:0009060: aerobic respiration	2.78E-03
56	GO:0007338: single fertilization	2.78E-03
57	GO:0048268: clathrin coat assembly	3.12E-03
58	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	3.12E-03
59	GO:0008202: steroid metabolic process	3.12E-03
60	GO:0030042: actin filament depolymerization	3.12E-03
61	GO:0006457: protein folding	3.32E-03
62	GO:0006855: drug transmembrane transport	3.33E-03
63	GO:0031347: regulation of defense response	3.46E-03
64	GO:0006032: chitin catabolic process	3.46E-03
65	GO:0043069: negative regulation of programmed cell death	3.46E-03
66	GO:0044550: secondary metabolite biosynthetic process	3.49E-03
67	GO:0009698: phenylpropanoid metabolic process	3.82E-03
68	GO:0000272: polysaccharide catabolic process	3.82E-03
69	GO:0009750: response to fructose	3.82E-03
70	GO:0016485: protein processing	3.82E-03
71	GO:0006886: intracellular protein transport	4.10E-03
72	GO:0015706: nitrate transport	4.19E-03
73	GO:0071365: cellular response to auxin stimulus	4.19E-03
74	GO:0009718: anthocyanin-containing compound biosynthetic process	4.57E-03
75	GO:0002237: response to molecule of bacterial origin	4.97E-03
76	GO:0042343: indole glucosinolate metabolic process	5.37E-03
77	GO:0010053: root epidermal cell differentiation	5.37E-03
78	GO:0005992: trehalose biosynthetic process	6.22E-03
79	GO:0006874: cellular calcium ion homeostasis	6.66E-03
80	GO:0016998: cell wall macromolecule catabolic process	7.11E-03
81	GO:0098542: defense response to other organism	7.11E-03
82	GO:0006730: one-carbon metabolic process	7.57E-03
83	GO:0007005: mitochondrion organization	7.57E-03
84	GO:0010017: red or far-red light signaling pathway	7.57E-03
85	GO:0009693: ethylene biosynthetic process	8.05E-03
86	GO:0019722: calcium-mediated signaling	8.53E-03
87	GO:0010089: xylem development	8.53E-03
88	GO:0015031: protein transport	9.42E-03
89	GO:0080022: primary root development	9.53E-03
90	GO:0042631: cellular response to water deprivation	9.53E-03
91	GO:0071472: cellular response to salt stress	1.00E-02
92	GO:0048544: recognition of pollen	1.06E-02
93	GO:0007166: cell surface receptor signaling pathway	1.08E-02
94	GO:0009611: response to wounding	1.10E-02
95	GO:0009749: response to glucose	1.11E-02
96	GO:0055072: iron ion homeostasis	1.11E-02
97	GO:0002229: defense response to oomycetes	1.16E-02
98	GO:0010193: response to ozone	1.16E-02
99	GO:0006891: intra-Golgi vesicle-mediated transport	1.16E-02
100	GO:0016032: viral process	1.22E-02
101	GO:0071281: cellular response to iron ion	1.28E-02
102	GO:0046686: response to cadmium ion	1.28E-02
103	GO:0009567: double fertilization forming a zygote and endosperm	1.33E-02
104	GO:0006351: transcription, DNA-templated	1.36E-02
105	GO:0016579: protein deubiquitination	1.45E-02
106	GO:0009911: positive regulation of flower development	1.51E-02
107	GO:0001666: response to hypoxia	1.51E-02
108	GO:0009615: response to virus	1.51E-02
109	GO:0009627: systemic acquired resistance	1.63E-02
110	GO:0042128: nitrate assimilation	1.63E-02
111	GO:0006888: ER to Golgi vesicle-mediated transport	1.70E-02
112	GO:0048573: photoperiodism, flowering	1.70E-02
113	GO:0046777: protein autophosphorylation	1.94E-02
114	GO:0006499: N-terminal protein myristoylation	1.96E-02
115	GO:0006099: tricarboxylic acid cycle	2.23E-02
116	GO:0006355: regulation of transcription, DNA-templated	2.25E-02
117	GO:0006631: fatty acid metabolic process	2.44E-02
118	GO:0006897: endocytosis	2.44E-02
119	GO:0009744: response to sucrose	2.59E-02
120	GO:0042742: defense response to bacterium	2.60E-02
121	GO:0009751: response to salicylic acid	2.65E-02
122	GO:0009408: response to heat	2.68E-02
123	GO:0009644: response to high light intensity	2.73E-02
124	GO:0006397: mRNA processing	2.80E-02
125	GO:0009636: response to toxic substance	2.81E-02
126	GO:0042538: hyperosmotic salinity response	3.04E-02
127	GO:0051603: proteolysis involved in cellular protein catabolic process	3.28E-02
128	GO:0006417: regulation of translation	3.44E-02
129	GO:0009620: response to fungus	3.85E-02
130	GO:0016569: covalent chromatin modification	3.94E-02
131	GO:0018105: peptidyl-serine phosphorylation	4.19E-02
132	GO:0006396: RNA processing	4.19E-02
133	GO:0000398: mRNA splicing, via spliceosome	4.55E-02
134	GO:0035556: intracellular signal transduction	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0005524: ATP binding	2.19E-06
2	GO:0010181: FMN binding	4.88E-05
3	GO:0004713: protein tyrosine kinase activity	1.63E-04
4	GO:0032934: sterol binding	2.73E-04
5	GO:0043141: ATP-dependent 5'-3' DNA helicase activity	2.73E-04
6	GO:0003958: NADPH-hemoprotein reductase activity	2.73E-04
7	GO:0031683: G-protein beta/gamma-subunit complex binding	4.52E-04
8	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	4.52E-04
9	GO:0004383: guanylate cyclase activity	4.52E-04
10	GO:0004478: methionine adenosyltransferase activity	4.52E-04
11	GO:0001664: G-protein coupled receptor binding	4.52E-04
12	GO:0005093: Rab GDP-dissociation inhibitor activity	4.52E-04
13	GO:0004871: signal transducer activity	7.42E-04
14	GO:0047769: arogenate dehydratase activity	8.60E-04
15	GO:0004664: prephenate dehydratase activity	8.60E-04
16	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	8.60E-04
17	GO:0000104: succinate dehydrogenase activity	1.08E-03
18	GO:0008177: succinate dehydrogenase (ubiquinone) activity	1.08E-03
19	GO:0102391: decanoate--CoA ligase activity	1.59E-03
20	GO:0004012: phospholipid-translocating ATPase activity	1.59E-03
21	GO:0003743: translation initiation factor activity	1.68E-03
22	GO:0015238: drug transmembrane transporter activity	1.85E-03
23	GO:0004467: long-chain fatty acid-CoA ligase activity	1.87E-03
24	GO:0004143: diacylglycerol kinase activity	1.87E-03
25	GO:0043022: ribosome binding	2.16E-03
26	GO:0035064: methylated histone binding	2.16E-03
27	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.43E-03
28	GO:0003951: NAD+ kinase activity	2.46E-03
29	GO:0008142: oxysterol binding	2.46E-03
30	GO:0004674: protein serine/threonine kinase activity	2.75E-03
31	GO:0071949: FAD binding	2.78E-03
32	GO:0003678: DNA helicase activity	2.78E-03
33	GO:0045309: protein phosphorylated amino acid binding	3.12E-03
34	GO:0015112: nitrate transmembrane transporter activity	3.12E-03
35	GO:0003729: mRNA binding	3.16E-03
36	GO:0004568: chitinase activity	3.46E-03
37	GO:0005545: 1-phosphatidylinositol binding	3.46E-03
38	GO:0005515: protein binding	3.56E-03
39	GO:0019904: protein domain specific binding	3.82E-03
40	GO:0008559: xenobiotic-transporting ATPase activity	3.82E-03
41	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	4.57E-03
42	GO:0031072: heat shock protein binding	4.57E-03
43	GO:0003779: actin binding	5.30E-03
44	GO:0005217: intracellular ligand-gated ion channel activity	5.37E-03
45	GO:0008061: chitin binding	5.37E-03
46	GO:0003712: transcription cofactor activity	5.37E-03
47	GO:0004970: ionotropic glutamate receptor activity	5.37E-03
48	GO:0004190: aspartic-type endopeptidase activity	5.37E-03
49	GO:0051082: unfolded protein binding	5.46E-03
50	GO:0005509: calcium ion binding	5.79E-03
51	GO:0043130: ubiquitin binding	6.22E-03
52	GO:0043424: protein histidine kinase binding	6.66E-03
53	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	7.11E-03
54	GO:0004298: threonine-type endopeptidase activity	7.11E-03
55	GO:0015297: antiporter activity	9.00E-03
56	GO:0030276: clathrin binding	1.00E-02
57	GO:0004843: thiol-dependent ubiquitin-specific protease activity	1.16E-02
58	GO:0016597: amino acid binding	1.45E-02
59	GO:0051213: dioxygenase activity	1.51E-02
60	GO:0030246: carbohydrate binding	1.55E-02
61	GO:0043531: ADP binding	1.61E-02
62	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.63E-02
63	GO:0004806: triglyceride lipase activity	1.70E-02
64	GO:0030247: polysaccharide binding	1.70E-02
65	GO:0004683: calmodulin-dependent protein kinase activity	1.70E-02
66	GO:0004497: monooxygenase activity	1.82E-02
67	GO:0005096: GTPase activator activity	1.89E-02
68	GO:0004222: metalloendopeptidase activity	1.96E-02
69	GO:0050897: cobalt ion binding	2.02E-02
70	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.16E-02
71	GO:0003746: translation elongation factor activity	2.16E-02
72	GO:0042803: protein homodimerization activity	2.28E-02
73	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	2.35E-02
74	GO:0003924: GTPase activity	2.68E-02
75	GO:0035091: phosphatidylinositol binding	2.73E-02
76	GO:0016298: lipase activity	3.28E-02
77	GO:0008234: cysteine-type peptidase activity	3.44E-02
78	GO:0016301: kinase activity	3.66E-02
79	GO:0016491: oxidoreductase activity	3.66E-02
80	GO:0008026: ATP-dependent helicase activity	4.28E-02
81	GO:0020037: heme binding	4.56E-02

Rank	GO Term	Adjusted P value
1	GO:0005674: transcription factor TFIIF complex	0.00E+00
2	GO:0005886: plasma membrane	3.59E-06
3	GO:0005911: cell-cell junction	1.18E-04
4	GO:0030130: clathrin coat of trans-Golgi network vesicle	4.52E-04
5	GO:0030132: clathrin coat of coated pit	4.52E-04
6	GO:0000813: ESCRT I complex	1.08E-03
7	GO:0030127: COPII vesicle coat	1.33E-03
8	GO:0005788: endoplasmic reticulum lumen	1.44E-03
9	GO:0005618: cell wall	1.71E-03
10	GO:0045273: respiratory chain complex II	2.16E-03
11	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	2.16E-03
12	GO:0005829: cytosol	3.43E-03
13	GO:0031307: integral component of mitochondrial outer membrane	4.19E-03
14	GO:0005834: heterotrimeric G-protein complex	4.83E-03
15	GO:0005750: mitochondrial respiratory chain complex III	4.97E-03
16	GO:0005795: Golgi stack	5.37E-03
17	GO:0005783: endoplasmic reticulum	5.86E-03
18	GO:0005758: mitochondrial intermembrane space	6.22E-03
19	GO:0005741: mitochondrial outer membrane	7.11E-03
20	GO:0005905: clathrin-coated pit	7.11E-03
21	GO:0005839: proteasome core complex	7.11E-03
22	GO:0015629: actin cytoskeleton	8.05E-03
23	GO:0030136: clathrin-coated vesicle	9.02E-03
24	GO:0005730: nucleolus	1.45E-02
25	GO:0030529: intracellular ribonucleoprotein complex	1.51E-02
26	GO:0000932: P-body	1.51E-02
27	GO:0000325: plant-type vacuole	2.02E-02
28	GO:0009506: plasmodesma	2.26E-02
29	GO:0031902: late endosome membrane	2.44E-02
30	GO:0031966: mitochondrial membrane	3.04E-02
31	GO:0000502: proteasome complex	3.20E-02
32	GO:0005635: nuclear envelope	3.36E-02
33	GO:0005681: spliceosomal complex	3.60E-02
34	GO:0016607: nuclear speck	3.68E-02
35	GO:0005794: Golgi apparatus	4.16E-02
36	GO:0005774: vacuolar membrane	4.16E-02
37	GO:0005789: endoplasmic reticulum membrane	4.38E-02