Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G10060

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090279: regulation of calcium ion import0.00E+00
2GO:0015805: S-adenosyl-L-methionine transport0.00E+00
3GO:0071474: cellular hyperosmotic response0.00E+00
4GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process0.00E+00
5GO:0035970: peptidyl-threonine dephosphorylation0.00E+00
6GO:0010480: microsporocyte differentiation3.64E-05
7GO:0010362: negative regulation of anion channel activity by blue light3.64E-05
8GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process3.64E-05
9GO:0071457: cellular response to ozone9.09E-05
10GO:0051262: protein tetramerization9.09E-05
11GO:0010118: stomatal movement1.55E-04
12GO:0031048: chromatin silencing by small RNA2.33E-04
13GO:0010306: rhamnogalacturonan II biosynthetic process2.33E-04
14GO:0071484: cellular response to light intensity2.33E-04
15GO:0019048: modulation by virus of host morphology or physiology2.33E-04
16GO:0015846: polyamine transport3.14E-04
17GO:0009902: chloroplast relocation3.14E-04
18GO:0071486: cellular response to high light intensity3.14E-04
19GO:0051567: histone H3-K9 methylation3.14E-04
20GO:0009816: defense response to bacterium, incompatible interaction3.27E-04
21GO:0071493: cellular response to UV-B4.01E-04
22GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway4.72E-04
23GO:0016458: gene silencing4.92E-04
24GO:0010304: PSII associated light-harvesting complex II catabolic process4.92E-04
25GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway4.92E-04
26GO:0048437: floral organ development6.87E-04
27GO:0007155: cell adhesion7.90E-04
28GO:0019430: removal of superoxide radicals8.97E-04
29GO:0071482: cellular response to light stimulus8.97E-04
30GO:0015996: chlorophyll catabolic process8.97E-04
31GO:0009657: plastid organization8.97E-04
32GO:0009638: phototropism1.12E-03
33GO:0030422: production of siRNA involved in RNA interference1.24E-03
34GO:0045036: protein targeting to chloroplast1.24E-03
35GO:0006415: translational termination1.36E-03
36GO:0048229: gametophyte development1.36E-03
37GO:0006820: anion transport1.49E-03
38GO:0010075: regulation of meristem growth1.62E-03
39GO:0010102: lateral root morphogenesis1.62E-03
40GO:0009934: regulation of meristem structural organization1.76E-03
41GO:0071732: cellular response to nitric oxide1.89E-03
42GO:0019953: sexual reproduction2.33E-03
43GO:0008299: isoprenoid biosynthetic process2.33E-03
44GO:0006306: DNA methylation2.48E-03
45GO:0071369: cellular response to ethylene stimulus2.80E-03
46GO:0048653: anther development3.30E-03
47GO:0048868: pollen tube development3.47E-03
48GO:0006342: chromatin silencing3.47E-03
49GO:0071472: cellular response to salt stress3.47E-03
50GO:0009791: post-embryonic development3.82E-03
51GO:0071281: cellular response to iron ion4.37E-03
52GO:0051607: defense response to virus4.95E-03
53GO:0010027: thylakoid membrane organization5.15E-03
54GO:0016042: lipid catabolic process5.53E-03
55GO:0009753: response to jasmonic acid6.10E-03
56GO:0018298: protein-chromophore linkage6.18E-03
57GO:0046686: response to cadmium ion6.36E-03
58GO:0000160: phosphorelay signal transduction system6.39E-03
59GO:0009637: response to blue light7.28E-03
60GO:0006839: mitochondrial transport7.97E-03
61GO:0006812: cation transport1.02E-02
62GO:0051603: proteolysis involved in cellular protein catabolic process1.10E-02
63GO:0006417: regulation of translation1.15E-02
64GO:0006396: RNA processing1.40E-02
65GO:0006508: proteolysis1.51E-02
66GO:0007623: circadian rhythm2.02E-02
67GO:0010228: vegetative to reproductive phase transition of meristem2.09E-02
68GO:0009739: response to gibberellin2.19E-02
69GO:0030154: cell differentiation2.24E-02
70GO:0009733: response to auxin2.31E-02
71GO:0009658: chloroplast organization2.76E-02
72GO:0006970: response to osmotic stress2.91E-02
73GO:0009860: pollen tube growth2.91E-02
74GO:0009723: response to ethylene3.06E-02
75GO:0005975: carbohydrate metabolic process3.12E-02
76GO:0046777: protein autophosphorylation3.38E-02
77GO:0009751: response to salicylic acid4.20E-02
78GO:0006629: lipid metabolic process4.25E-02
79GO:0006468: protein phosphorylation4.76E-02
RankGO TermAdjusted P value
1GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity0.00E+00
2GO:0019808: polyamine binding0.00E+00
3GO:0005227: calcium activated cation channel activity0.00E+00
4GO:0034256: chlorophyll(ide) b reductase activity3.64E-05
5GO:0030941: chloroplast targeting sequence binding3.64E-05
6GO:0008252: nucleotidase activity3.64E-05
7GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity3.64E-05
8GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity9.09E-05
9GO:0070402: NADPH binding1.58E-04
10GO:0035197: siRNA binding2.33E-04
11GO:0016149: translation release factor activity, codon specific2.33E-04
12GO:0009882: blue light photoreceptor activity2.33E-04
13GO:0051861: glycolipid binding3.14E-04
14GO:0008381: mechanically-gated ion channel activity4.01E-04
15GO:0004784: superoxide dismutase activity4.92E-04
16GO:0005261: cation channel activity5.88E-04
17GO:0004723: calcium-dependent protein serine/threonine phosphatase activity5.88E-04
18GO:0003747: translation release factor activity1.01E-03
19GO:0047372: acylglycerol lipase activity1.36E-03
20GO:0004521: endoribonuclease activity1.49E-03
21GO:0000155: phosphorelay sensor kinase activity1.62E-03
22GO:0004565: beta-galactosidase activity1.62E-03
23GO:0033612: receptor serine/threonine kinase binding2.48E-03
24GO:0010181: FMN binding3.64E-03
25GO:0016853: isomerase activity3.64E-03
26GO:0052689: carboxylic ester hydrolase activity4.27E-03
27GO:0004721: phosphoprotein phosphatase activity5.76E-03
28GO:0030145: manganese ion binding6.83E-03
29GO:0004674: protein serine/threonine kinase activity6.84E-03
30GO:0003993: acid phosphatase activity7.51E-03
31GO:0004185: serine-type carboxypeptidase activity8.68E-03
32GO:0043621: protein self-association9.17E-03
33GO:0016298: lipase activity1.10E-02
34GO:0003777: microtubule motor activity1.15E-02
35GO:0016301: kinase activity1.38E-02
36GO:0016746: transferase activity, transferring acyl groups1.40E-02
37GO:0042802: identical protein binding2.40E-02
38GO:0016491: oxidoreductase activity2.70E-02
39GO:0016788: hydrolase activity, acting on ester bonds2.80E-02
40GO:0003682: chromatin binding2.87E-02
41GO:0004672: protein kinase activity3.02E-02
42GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting3.66E-02
43GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding3.95E-02
44GO:0016787: hydrolase activity4.38E-02
RankGO TermAdjusted P value
1GO:0042597: periplasmic space0.00E+00
2GO:0005719: nuclear euchromatin2.33E-04
3GO:0031359: integral component of chloroplast outer membrane6.87E-04
4GO:0015030: Cajal body1.12E-03
5GO:0005578: proteinaceous extracellular matrix1.62E-03
6GO:0030529: intracellular ribonucleoprotein complex5.15E-03
7GO:0009707: chloroplast outer membrane6.18E-03
8GO:0005576: extracellular region1.05E-02
9GO:0009570: chloroplast stroma1.06E-02
10GO:0010287: plastoglobule1.55E-02
11GO:0005654: nucleoplasm1.58E-02
12GO:0009941: chloroplast envelope2.57E-02
13GO:0005773: vacuole2.99E-02
14GO:0009506: plasmodesma3.01E-02
15GO:0031969: chloroplast membrane3.22E-02
16GO:0005743: mitochondrial inner membrane4.03E-02
17GO:0009507: chloroplast4.40E-02
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Gene type



Gene DE type