co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G09690

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0044843: cell cycle G1/S phase transition	0.00E+00
2	GO:0006412: translation	4.04E-145
3	GO:0042254: ribosome biogenesis	1.14E-56
4	GO:0000027: ribosomal large subunit assembly	6.37E-13
5	GO:0000028: ribosomal small subunit assembly	1.22E-08
6	GO:0009735: response to cytokinin	2.22E-07
7	GO:0042274: ribosomal small subunit biogenesis	2.16E-05
8	GO:0009793: embryo development ending in seed dormancy	2.27E-05
9	GO:0009955: adaxial/abaxial pattern specification	7.27E-05
10	GO:0006407: rRNA export from nucleus	1.67E-04
11	GO:0030490: maturation of SSU-rRNA	1.67E-04
12	GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	1.67E-04
13	GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	1.67E-04
14	GO:0010162: seed dormancy process	2.70E-04
15	GO:0048569: post-embryonic animal organ development	3.78E-04
16	GO:0009967: positive regulation of signal transduction	3.78E-04
17	GO:0006626: protein targeting to mitochondrion	4.10E-04
18	GO:1902626: assembly of large subunit precursor of preribosome	6.19E-04
19	GO:0002181: cytoplasmic translation	6.19E-04
20	GO:0010476: gibberellin mediated signaling pathway	6.19E-04
21	GO:0042256: mature ribosome assembly	6.19E-04
22	GO:0090506: axillary shoot meristem initiation	6.19E-04
23	GO:0009944: polarity specification of adaxial/abaxial axis	6.38E-04
24	GO:0009965: leaf morphogenesis	6.56E-04
25	GO:0006364: rRNA processing	8.23E-04
26	GO:0070301: cellular response to hydrogen peroxide	8.83E-04
27	GO:0006241: CTP biosynthetic process	8.83E-04
28	GO:0006165: nucleoside diphosphate phosphorylation	8.83E-04
29	GO:0006228: UTP biosynthetic process	8.83E-04
30	GO:0009294: DNA mediated transformation	9.13E-04
31	GO:0040007: growth	9.13E-04
32	GO:2000032: regulation of secondary shoot formation	1.17E-03
33	GO:0006183: GTP biosynthetic process	1.17E-03
34	GO:0071493: cellular response to UV-B	1.48E-03
35	GO:0032502: developmental process	1.62E-03
36	GO:0000470: maturation of LSU-rRNA	1.83E-03
37	GO:0006414: translational elongation	2.16E-03
38	GO:0000911: cytokinesis by cell plate formation	2.19E-03
39	GO:0001558: regulation of cell growth	3.41E-03
40	GO:0000387: spliceosomal snRNP assembly	4.33E-03
41	GO:0008283: cell proliferation	4.61E-03
42	GO:0010015: root morphogenesis	5.32E-03
43	GO:0006913: nucleocytoplasmic transport	5.32E-03
44	GO:0006820: anion transport	5.84E-03
45	GO:0009409: response to cold	6.28E-03
46	GO:0010229: inflorescence development	6.38E-03
47	GO:0010102: lateral root morphogenesis	6.38E-03
48	GO:0048467: gynoecium development	6.93E-03
49	GO:0046686: response to cadmium ion	8.02E-03
50	GO:0030150: protein import into mitochondrial matrix	8.70E-03
51	GO:0051302: regulation of cell division	9.33E-03
52	GO:0007005: mitochondrion organization	1.06E-02
53	GO:0071215: cellular response to abscisic acid stimulus	1.13E-02
54	GO:0000413: protein peptidyl-prolyl isomerization	1.34E-02
55	GO:0006413: translational initiation	1.43E-02
56	GO:0009749: response to glucose	1.56E-02
57	GO:0009791: post-embryonic development	1.56E-02
58	GO:0010090: trichome morphogenesis	1.80E-02
59	GO:0010252: auxin homeostasis	1.88E-02
60	GO:0006811: ion transport	2.76E-02
61	GO:0010043: response to zinc ion	2.85E-02
62	GO:0009644: response to high light intensity	3.86E-02
63	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	4.18E-02
64	GO:0010224: response to UV-B	4.62E-02
65	GO:0006417: regulation of translation	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0016018: cyclosporin A binding	0.00E+00
2	GO:0003735: structural constituent of ribosome	2.26E-174
3	GO:0003729: mRNA binding	1.63E-45
4	GO:0019843: rRNA binding	5.18E-08
5	GO:0008097: 5S rRNA binding	1.16E-05
6	GO:0005078: MAP-kinase scaffold activity	3.78E-04
7	GO:0032947: protein complex scaffold	6.19E-04
8	GO:0070181: small ribosomal subunit rRNA binding	6.19E-04
9	GO:0004407: histone deacetylase activity	6.38E-04
10	GO:0004550: nucleoside diphosphate kinase activity	8.83E-04
11	GO:0008235: metalloexopeptidase activity	2.58E-03
12	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.84E-03
13	GO:0015288: porin activity	2.99E-03
14	GO:0008308: voltage-gated anion channel activity	3.41E-03
15	GO:0015266: protein channel activity	6.38E-03
16	GO:0046872: metal ion binding	1.69E-02
17	GO:0003746: translation elongation factor activity	3.05E-02
18	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.07E-02

Rank	GO Term	Adjusted P value
1	GO:0043186: P granule	0.00E+00
2	GO:0022626: cytosolic ribosome	3.96E-119
3	GO:0005840: ribosome	5.24E-113
4	GO:0022625: cytosolic large ribosomal subunit	1.66E-100
5	GO:0022627: cytosolic small ribosomal subunit	1.74E-69
6	GO:0005730: nucleolus	1.90E-49
7	GO:0005737: cytoplasm	3.32E-37
8	GO:0005829: cytosol	1.47E-35
9	GO:0009506: plasmodesma	7.96E-32
10	GO:0015934: large ribosomal subunit	2.63E-17
11	GO:0005774: vacuolar membrane	4.74E-15
12	GO:0016020: membrane	5.36E-13
13	GO:0005618: cell wall	2.28E-12
14	GO:0015935: small ribosomal subunit	1.60E-10
15	GO:0005773: vacuole	2.42E-10
16	GO:0005886: plasma membrane	2.70E-09
17	GO:0009507: chloroplast	1.43E-04
18	GO:0005742: mitochondrial outer membrane translocase complex	1.56E-04
19	GO:0030686: 90S preribosome	1.67E-04
20	GO:0034719: SMN-Sm protein complex	6.19E-04
21	GO:0005853: eukaryotic translation elongation factor 1 complex	6.19E-04
22	GO:0005682: U5 snRNP	1.17E-03
23	GO:0005687: U4 snRNP	1.48E-03
24	GO:0097526: spliceosomal tri-snRNP complex	1.48E-03
25	GO:0005689: U12-type spliceosomal complex	2.19E-03
26	GO:0071004: U2-type prespliceosome	2.99E-03
27	GO:0046930: pore complex	3.41E-03
28	GO:0005763: mitochondrial small ribosomal subunit	3.86E-03
29	GO:0005685: U1 snRNP	3.86E-03
30	GO:0071011: precatalytic spliceosome	4.33E-03
31	GO:0005686: U2 snRNP	4.81E-03
32	GO:0071013: catalytic step 2 spliceosome	5.32E-03
33	GO:0019013: viral nucleocapsid	6.38E-03
34	GO:0005758: mitochondrial intermembrane space	8.70E-03
35	GO:0005741: mitochondrial outer membrane	9.97E-03
36	GO:0005622: intracellular	1.12E-02
37	GO:0030529: intracellular ribonucleoprotein complex	2.13E-02
38	GO:0005743: mitochondrial inner membrane	4.04E-02