Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G09560

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0051553: flavone biosynthetic process0.00E+00
2GO:0072722: response to amitrole0.00E+00
3GO:0071327: cellular response to trehalose stimulus0.00E+00
4GO:0032260: response to jasmonic acid stimulus involved in jasmonic acid and ethylene-dependent systemic resistance0.00E+00
5GO:0042891: antibiotic transport0.00E+00
6GO:0017186: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase0.00E+00
7GO:0070212: protein poly-ADP-ribosylation0.00E+00
8GO:0045792: negative regulation of cell size0.00E+00
9GO:1900367: positive regulation of defense response to insect0.00E+00
10GO:0042430: indole-containing compound metabolic process0.00E+00
11GO:0002376: immune system process0.00E+00
12GO:0042742: defense response to bacterium9.96E-13
13GO:0010200: response to chitin1.02E-10
14GO:0009617: response to bacterium1.10E-10
15GO:0009816: defense response to bacterium, incompatible interaction4.46E-09
16GO:0006952: defense response1.02E-07
17GO:0009627: systemic acquired resistance1.87E-07
18GO:0006468: protein phosphorylation2.45E-07
19GO:0010150: leaf senescence3.01E-07
20GO:0051707: response to other organism1.47E-06
21GO:0031349: positive regulation of defense response4.70E-06
22GO:0080151: positive regulation of salicylic acid mediated signaling pathway4.70E-06
23GO:0009626: plant-type hypersensitive response7.23E-06
24GO:0009625: response to insect1.13E-05
25GO:0009751: response to salicylic acid1.40E-05
26GO:0052544: defense response by callose deposition in cell wall4.17E-05
27GO:0080142: regulation of salicylic acid biosynthetic process6.61E-05
28GO:0002237: response to molecule of bacterial origin7.75E-05
29GO:0000162: tryptophan biosynthetic process1.09E-04
30GO:0009863: salicylic acid mediated signaling pathway1.27E-04
31GO:0009759: indole glucosinolate biosynthetic process1.50E-04
32GO:0010942: positive regulation of cell death1.50E-04
33GO:0016998: cell wall macromolecule catabolic process1.69E-04
34GO:0006979: response to oxidative stress1.73E-04
35GO:0071456: cellular response to hypoxia1.93E-04
36GO:0009612: response to mechanical stimulus2.05E-04
37GO:0009700: indole phytoalexin biosynthetic process3.22E-04
38GO:1901183: positive regulation of camalexin biosynthetic process3.22E-04
39GO:0010230: alternative respiration3.22E-04
40GO:0050691: regulation of defense response to virus by host3.22E-04
41GO:0006643: membrane lipid metabolic process3.22E-04
42GO:0060862: negative regulation of floral organ abscission3.22E-04
43GO:0010266: response to vitamin B13.22E-04
44GO:0051245: negative regulation of cellular defense response3.22E-04
45GO:0009609: response to symbiotic bacterium3.22E-04
46GO:0030162: regulation of proteolysis3.36E-04
47GO:0043562: cellular response to nitrogen levels4.12E-04
48GO:2000031: regulation of salicylic acid mediated signaling pathway4.12E-04
49GO:0000302: response to reactive oxygen species4.44E-04
50GO:0010112: regulation of systemic acquired resistance4.95E-04
51GO:0006032: chitin catabolic process6.82E-04
52GO:0019483: beta-alanine biosynthetic process7.02E-04
53GO:0015865: purine nucleotide transport7.02E-04
54GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine7.02E-04
55GO:0010541: acropetal auxin transport7.02E-04
56GO:0080183: response to photooxidative stress7.02E-04
57GO:0015914: phospholipid transport7.02E-04
58GO:0080185: effector dependent induction by symbiont of host immune response7.02E-04
59GO:0010618: aerenchyma formation7.02E-04
60GO:0006212: uracil catabolic process7.02E-04
61GO:0009682: induced systemic resistance7.88E-04
62GO:0012501: programmed cell death8.99E-04
63GO:0009407: toxin catabolic process1.12E-03
64GO:0010581: regulation of starch biosynthetic process1.14E-03
65GO:1900140: regulation of seedling development1.14E-03
66GO:0055074: calcium ion homeostasis1.14E-03
67GO:0010272: response to silver ion1.14E-03
68GO:0048281: inflorescence morphogenesis1.14E-03
69GO:0050832: defense response to fungus1.16E-03
70GO:0009969: xyloglucan biosynthetic process1.28E-03
71GO:0009651: response to salt stress1.62E-03
72GO:0009399: nitrogen fixation1.63E-03
73GO:0015696: ammonium transport1.63E-03
74GO:0000187: activation of MAPK activity1.63E-03
75GO:0034219: carbohydrate transmembrane transport1.63E-03
76GO:0002239: response to oomycetes1.63E-03
77GO:0043207: response to external biotic stimulus1.63E-03
78GO:0046902: regulation of mitochondrial membrane permeability1.63E-03
79GO:0006612: protein targeting to membrane1.63E-03
80GO:0009414: response to water deprivation1.91E-03
81GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process2.02E-03
82GO:2000022: regulation of jasmonic acid mediated signaling pathway2.09E-03
83GO:0009814: defense response, incompatible interaction2.09E-03
84GO:0009636: response to toxic substance2.13E-03
85GO:0006542: glutamine biosynthetic process2.19E-03
86GO:0080037: negative regulation of cytokinin-activated signaling pathway2.19E-03
87GO:0060548: negative regulation of cell death2.19E-03
88GO:0009652: thigmotropism2.19E-03
89GO:0048830: adventitious root development2.19E-03
90GO:0072488: ammonium transmembrane transport2.19E-03
91GO:0010363: regulation of plant-type hypersensitive response2.19E-03
92GO:0010600: regulation of auxin biosynthetic process2.19E-03
93GO:0031347: regulation of defense response2.35E-03
94GO:2000762: regulation of phenylpropanoid metabolic process2.80E-03
95GO:0046283: anthocyanin-containing compound metabolic process2.80E-03
96GO:0010225: response to UV-C2.80E-03
97GO:0009697: salicylic acid biosynthetic process2.80E-03
98GO:0061025: membrane fusion3.35E-03
99GO:0009646: response to absence of light3.35E-03
100GO:1900425: negative regulation of defense response to bacterium3.46E-03
101GO:0002238: response to molecule of fungal origin3.46E-03
102GO:0060918: auxin transport3.46E-03
103GO:0009851: auxin biosynthetic process3.60E-03
104GO:0009737: response to abscisic acid3.77E-03
105GO:0010193: response to ozone3.85E-03
106GO:0009723: response to ethylene4.15E-03
107GO:0010310: regulation of hydrogen peroxide metabolic process4.17E-03
108GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response4.17E-03
109GO:0000911: cytokinesis by cell plate formation4.17E-03
110GO:0030163: protein catabolic process4.38E-03
111GO:0050829: defense response to Gram-negative bacterium4.92E-03
112GO:0010044: response to aluminum ion4.92E-03
113GO:0009610: response to symbiotic fungus4.92E-03
114GO:0046470: phosphatidylcholine metabolic process4.92E-03
115GO:0043090: amino acid import4.92E-03
116GO:0071446: cellular response to salicylic acid stimulus4.92E-03
117GO:0016192: vesicle-mediated transport4.97E-03
118GO:0009819: drought recovery5.71E-03
119GO:0043068: positive regulation of programmed cell death5.71E-03
120GO:1900150: regulation of defense response to fungus5.71E-03
121GO:0030091: protein repair5.71E-03
122GO:0009787: regulation of abscisic acid-activated signaling pathway5.71E-03
123GO:0042128: nitrate assimilation6.22E-03
124GO:0010120: camalexin biosynthetic process6.55E-03
125GO:0010204: defense response signaling pathway, resistance gene-independent6.55E-03
126GO:0030968: endoplasmic reticulum unfolded protein response6.55E-03
127GO:0009699: phenylpropanoid biosynthetic process6.55E-03
128GO:0006075: (1->3)-beta-D-glucan biosynthetic process6.55E-03
129GO:0008219: cell death7.27E-03
130GO:0009817: defense response to fungus, incompatible interaction7.27E-03
131GO:0046685: response to arsenic-containing substance7.42E-03
132GO:0051865: protein autoubiquitination7.42E-03
133GO:0009813: flavonoid biosynthetic process7.64E-03
134GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway8.34E-03
135GO:1900426: positive regulation of defense response to bacterium8.34E-03
136GO:0010205: photoinhibition8.34E-03
137GO:0048527: lateral root development8.41E-03
138GO:0006995: cellular response to nitrogen starvation9.30E-03
139GO:0009870: defense response signaling pathway, resistance gene-dependent9.30E-03
140GO:0043069: negative regulation of programmed cell death9.30E-03
141GO:0009641: shade avoidance9.30E-03
142GO:0010215: cellulose microfibril organization9.30E-03
143GO:0007166: cell surface receptor signaling pathway1.00E-02
144GO:0015031: protein transport1.02E-02
145GO:0000272: polysaccharide catabolic process1.03E-02
146GO:0009684: indoleacetic acid biosynthetic process1.03E-02
147GO:0006887: exocytosis1.10E-02
148GO:0002213: defense response to insect1.13E-02
149GO:0010105: negative regulation of ethylene-activated signaling pathway1.13E-02
150GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.13E-02
151GO:0000266: mitochondrial fission1.13E-02
152GO:0015706: nitrate transport1.13E-02
153GO:0042542: response to hydrogen peroxide1.14E-02
154GO:0006807: nitrogen compound metabolic process1.24E-02
155GO:0007034: vacuolar transport1.35E-02
156GO:0009266: response to temperature stimulus1.35E-02
157GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.45E-02
158GO:0010167: response to nitrate1.46E-02
159GO:0070588: calcium ion transmembrane transport1.46E-02
160GO:0046686: response to cadmium ion1.50E-02
161GO:0034976: response to endoplasmic reticulum stress1.58E-02
162GO:2000377: regulation of reactive oxygen species metabolic process1.70E-02
163GO:0010073: meristem maintenance1.83E-02
164GO:0006874: cellular calcium ion homeostasis1.83E-02
165GO:0048278: vesicle docking1.95E-02
166GO:0009611: response to wounding2.04E-02
167GO:0035428: hexose transmembrane transport2.08E-02
168GO:0030433: ubiquitin-dependent ERAD pathway2.08E-02
169GO:0031348: negative regulation of defense response2.08E-02
170GO:0009620: response to fungus2.10E-02
171GO:0044550: secondary metabolite biosynthetic process2.15E-02
172GO:0009411: response to UV2.22E-02
173GO:0001944: vasculature development2.22E-02
174GO:0006012: galactose metabolic process2.22E-02
175GO:0010584: pollen exine formation2.35E-02
176GO:0009742: brassinosteroid mediated signaling pathway2.44E-02
177GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.49E-02
178GO:0042147: retrograde transport, endosome to Golgi2.49E-02
179GO:0006886: intracellular protein transport2.53E-02
180GO:0010051: xylem and phloem pattern formation2.63E-02
181GO:0042631: cellular response to water deprivation2.63E-02
182GO:0010197: polar nucleus fusion2.78E-02
183GO:0046323: glucose import2.78E-02
184GO:0008360: regulation of cell shape2.78E-02
185GO:0006457: protein folding2.90E-02
186GO:0016042: lipid catabolic process3.05E-02
187GO:0006623: protein targeting to vacuole3.07E-02
188GO:0010183: pollen tube guidance3.07E-02
189GO:0002229: defense response to oomycetes3.23E-02
190GO:0006891: intra-Golgi vesicle-mediated transport3.23E-02
191GO:0016032: viral process3.38E-02
192GO:0019761: glucosinolate biosynthetic process3.38E-02
193GO:0009630: gravitropism3.38E-02
194GO:0009753: response to jasmonic acid3.44E-02
195GO:0040008: regulation of growth3.78E-02
196GO:0006904: vesicle docking involved in exocytosis3.86E-02
197GO:0051607: defense response to virus4.03E-02
198GO:0001666: response to hypoxia4.19E-02
199GO:0009615: response to virus4.19E-02
200GO:0006470: protein dephosphorylation4.52E-02
201GO:0006906: vesicle fusion4.53E-02
202GO:0006950: response to stress4.71E-02
203GO:0055114: oxidation-reduction process4.81E-02
204GO:0016049: cell growth4.88E-02
RankGO TermAdjusted P value
1GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
2GO:0005212: structural constituent of eye lens0.00E+00
3GO:0016603: glutaminyl-peptide cyclotransferase activity0.00E+00
4GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
5GO:0033759: flavone synthase activity0.00E+00
6GO:0015370: solute:sodium symporter activity0.00E+00
7GO:0050269: coniferyl-aldehyde dehydrogenase activity0.00E+00
8GO:0003837: beta-ureidopropionase activity0.00E+00
9GO:0004674: protein serine/threonine kinase activity1.23E-06
10GO:0016301: kinase activity5.00E-06
11GO:0047631: ADP-ribose diphosphatase activity1.04E-04
12GO:0005509: calcium ion binding1.32E-04
13GO:0000210: NAD+ diphosphatase activity1.50E-04
14GO:0004364: glutathione transferase activity2.50E-04
15GO:0008320: protein transmembrane transporter activity2.67E-04
16GO:0043295: glutathione binding2.67E-04
17GO:2001147: camalexin binding3.22E-04
18GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity3.22E-04
19GO:0031127: alpha-(1,2)-fucosyltransferase activity3.22E-04
20GO:2001227: quercitrin binding3.22E-04
21GO:1901149: salicylic acid binding3.22E-04
22GO:0033984: indole-3-glycerol-phosphate lyase activity3.22E-04
23GO:0080042: ADP-glucose pyrophosphohydrolase activity3.22E-04
24GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity3.22E-04
25GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity3.22E-04
26GO:0004714: transmembrane receptor protein tyrosine kinase activity3.36E-04
27GO:0031625: ubiquitin protein ligase binding5.08E-04
28GO:0004568: chitinase activity6.82E-04
29GO:0080041: ADP-ribose pyrophosphohydrolase activity7.02E-04
30GO:0047364: desulfoglucosinolate sulfotransferase activity7.02E-04
31GO:0017110: nucleoside-diphosphatase activity7.02E-04
32GO:0005524: ATP binding7.29E-04
33GO:0016595: glutamate binding1.14E-03
34GO:0004049: anthranilate synthase activity1.14E-03
35GO:0008061: chitin binding1.28E-03
36GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.53E-03
37GO:0035529: NADH pyrophosphatase activity1.63E-03
38GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen1.65E-03
39GO:0015204: urea transmembrane transporter activity2.19E-03
40GO:0004834: tryptophan synthase activity2.19E-03
41GO:0005546: phosphatidylinositol-4,5-bisphosphate binding2.80E-03
42GO:0005471: ATP:ADP antiporter activity2.80E-03
43GO:0004356: glutamate-ammonia ligase activity2.80E-03
44GO:0045431: flavonol synthase activity2.80E-03
45GO:0004029: aldehyde dehydrogenase (NAD) activity3.46E-03
46GO:0008519: ammonium transmembrane transporter activity3.46E-03
47GO:0030976: thiamine pyrophosphate binding3.46E-03
48GO:0005516: calmodulin binding3.55E-03
49GO:0033743: peptide-methionine (R)-S-oxide reductase activity4.17E-03
50GO:0051082: unfolded protein binding4.21E-03
51GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity4.92E-03
52GO:0004708: MAP kinase kinase activity5.71E-03
53GO:0004034: aldose 1-epimerase activity5.71E-03
54GO:0003843: 1,3-beta-D-glucan synthase activity6.55E-03
55GO:0004630: phospholipase D activity6.55E-03
56GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity6.55E-03
57GO:0004683: calmodulin-dependent protein kinase activity6.56E-03
58GO:0008417: fucosyltransferase activity7.42E-03
59GO:0015112: nitrate transmembrane transporter activity8.34E-03
60GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity8.34E-03
61GO:0050897: cobalt ion binding8.41E-03
62GO:0004713: protein tyrosine kinase activity9.30E-03
63GO:0005543: phospholipid binding1.03E-02
64GO:0005507: copper ion binding1.06E-02
65GO:0019825: oxygen binding1.06E-02
66GO:0005484: SNAP receptor activity1.19E-02
67GO:0043565: sequence-specific DNA binding1.23E-02
68GO:0031072: heat shock protein binding1.24E-02
69GO:0005262: calcium channel activity1.24E-02
70GO:0005388: calcium-transporting ATPase activity1.24E-02
71GO:0015293: symporter activity1.34E-02
72GO:0051287: NAD binding1.45E-02
73GO:0003712: transcription cofactor activity1.46E-02
74GO:0008146: sulfotransferase activity1.46E-02
75GO:0004970: ionotropic glutamate receptor activity1.46E-02
76GO:0051119: sugar transmembrane transporter activity1.46E-02
77GO:0005217: intracellular ligand-gated ion channel activity1.46E-02
78GO:0004190: aspartic-type endopeptidase activity1.46E-02
79GO:0016298: lipase activity1.67E-02
80GO:0005506: iron ion binding1.89E-02
81GO:0004298: threonine-type endopeptidase activity1.95E-02
82GO:0033612: receptor serine/threonine kinase binding1.95E-02
83GO:0008810: cellulase activity2.22E-02
84GO:0003756: protein disulfide isomerase activity2.35E-02
85GO:0008080: N-acetyltransferase activity2.78E-02
86GO:0016853: isomerase activity2.92E-02
87GO:0005355: glucose transmembrane transporter activity2.92E-02
88GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity3.86E-02
89GO:0016722: oxidoreductase activity, oxidizing metal ions3.86E-02
90GO:0016597: amino acid binding4.03E-02
91GO:0020037: heme binding4.14E-02
92GO:0009931: calcium-dependent protein serine/threonine kinase activity4.53E-02
93GO:0046872: metal ion binding4.68E-02
94GO:0030247: polysaccharide binding4.71E-02
95GO:0004806: triglyceride lipase activity4.71E-02
96GO:0008757: S-adenosylmethionine-dependent methyltransferase activity4.88E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane6.58E-19
2GO:0016021: integral component of membrane1.21E-08
3GO:0005783: endoplasmic reticulum1.32E-04
4GO:0009506: plasmodesma2.99E-04
5GO:0045252: oxoglutarate dehydrogenase complex3.22E-04
6GO:0030134: ER to Golgi transport vesicle7.02E-04
7GO:0005950: anthranilate synthase complex7.02E-04
8GO:0005901: caveola7.02E-04
9GO:0005788: endoplasmic reticulum lumen7.64E-04
10GO:0005618: cell wall9.94E-04
11GO:0005829: cytosol1.43E-03
12GO:0030658: transport vesicle membrane1.63E-03
13GO:0070062: extracellular exosome1.63E-03
14GO:0005775: vacuolar lumen1.63E-03
15GO:0005789: endoplasmic reticulum membrane1.70E-03
16GO:0016020: membrane3.16E-03
17GO:0009504: cell plate3.60E-03
18GO:0031225: anchored component of membrane3.81E-03
19GO:0005801: cis-Golgi network4.17E-03
20GO:0005794: Golgi apparatus4.53E-03
21GO:0032580: Golgi cisterna membrane4.67E-03
22GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane4.92E-03
23GO:0000148: 1,3-beta-D-glucan synthase complex6.55E-03
24GO:0019773: proteasome core complex, alpha-subunit complex6.55E-03
25GO:0019005: SCF ubiquitin ligase complex7.27E-03
26GO:0030665: clathrin-coated vesicle membrane8.34E-03
27GO:0017119: Golgi transport complex9.30E-03
28GO:0005740: mitochondrial envelope9.30E-03
29GO:0031902: late endosome membrane1.10E-02
30GO:0005774: vacuolar membrane1.17E-02
31GO:0046658: anchored component of plasma membrane1.21E-02
32GO:0031012: extracellular matrix1.24E-02
33GO:0005773: vacuole1.35E-02
34GO:0005741: mitochondrial outer membrane1.95E-02
35GO:0005839: proteasome core complex1.95E-02
36GO:0048046: apoplast3.14E-02
37GO:0000145: exocyst3.38E-02
38GO:0005576: extracellular region3.44E-02
39GO:0005737: cytoplasm3.87E-02
40GO:0005887: integral component of plasma membrane4.60E-02
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Gene type



Gene DE type