co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G09100

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0048227: plasma membrane to endosome transport	0.00E+00
2	GO:0010360: negative regulation of anion channel activity	0.00E+00
3	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
4	GO:0001881: receptor recycling	0.00E+00
5	GO:0032780: negative regulation of ATPase activity	0.00E+00
6	GO:1901017: negative regulation of potassium ion transmembrane transporter activity	0.00E+00
7	GO:0051788: response to misfolded protein	6.85E-07
8	GO:0043248: proteasome assembly	2.87E-05
9	GO:1901183: positive regulation of camalexin biosynthetic process	1.16E-04
10	GO:0048455: stamen formation	1.16E-04
11	GO:0035266: meristem growth	1.16E-04
12	GO:0007292: female gamete generation	1.16E-04
13	GO:0006805: xenobiotic metabolic process	1.16E-04
14	GO:1990641: response to iron ion starvation	1.16E-04
15	GO:0080173: male-female gamete recognition during double fertilization	1.16E-04
16	GO:1902361: mitochondrial pyruvate transmembrane transport	1.16E-04
17	GO:0006101: citrate metabolic process	2.69E-04
18	GO:0006850: mitochondrial pyruvate transport	2.69E-04
19	GO:1902000: homogentisate catabolic process	2.69E-04
20	GO:0019441: tryptophan catabolic process to kynurenine	2.69E-04
21	GO:0097054: L-glutamate biosynthetic process	2.69E-04
22	GO:0031648: protein destabilization	2.69E-04
23	GO:0019521: D-gluconate metabolic process	2.69E-04
24	GO:0019374: galactolipid metabolic process	2.69E-04
25	GO:0009809: lignin biosynthetic process	4.37E-04
26	GO:0010359: regulation of anion channel activity	4.45E-04
27	GO:0009072: aromatic amino acid family metabolic process	4.45E-04
28	GO:0060968: regulation of gene silencing	4.45E-04
29	GO:0008333: endosome to lysosome transport	4.45E-04
30	GO:0051603: proteolysis involved in cellular protein catabolic process	4.57E-04
31	GO:0031348: negative regulation of defense response	5.19E-04
32	GO:0006537: glutamate biosynthetic process	6.38E-04
33	GO:0001676: long-chain fatty acid metabolic process	6.38E-04
34	GO:0006511: ubiquitin-dependent protein catabolic process	7.55E-04
35	GO:0046686: response to cadmium ion	8.45E-04
36	GO:0019676: ammonia assimilation cycle	8.47E-04
37	GO:0010363: regulation of plant-type hypersensitive response	8.47E-04
38	GO:0009697: salicylic acid biosynthetic process	1.07E-03
39	GO:0005513: detection of calcium ion	1.07E-03
40	GO:0006097: glyoxylate cycle	1.07E-03
41	GO:0030308: negative regulation of cell growth	1.07E-03
42	GO:0006464: cellular protein modification process	1.13E-03
43	GO:0009651: response to salt stress	1.13E-03
44	GO:0035435: phosphate ion transmembrane transport	1.31E-03
45	GO:1902456: regulation of stomatal opening	1.31E-03
46	GO:0006014: D-ribose metabolic process	1.31E-03
47	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	1.31E-03
48	GO:0006751: glutathione catabolic process	1.31E-03
49	GO:0048827: phyllome development	1.31E-03
50	GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation	1.31E-03
51	GO:0048232: male gamete generation	1.31E-03
52	GO:0009612: response to mechanical stimulus	1.56E-03
53	GO:0050790: regulation of catalytic activity	1.84E-03
54	GO:0006955: immune response	1.84E-03
55	GO:0048528: post-embryonic root development	1.84E-03
56	GO:0010043: response to zinc ion	1.99E-03
57	GO:0010078: maintenance of root meristem identity	2.13E-03
58	GO:2000070: regulation of response to water deprivation	2.13E-03
59	GO:0006102: isocitrate metabolic process	2.13E-03
60	GO:0006644: phospholipid metabolic process	2.13E-03
61	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	2.13E-03
62	GO:0045087: innate immune response	2.18E-03
63	GO:0010120: camalexin biosynthetic process	2.43E-03
64	GO:0000373: Group II intron splicing	2.74E-03
65	GO:0046685: response to arsenic-containing substance	2.74E-03
66	GO:0006098: pentose-phosphate shunt	2.74E-03
67	GO:0006855: drug transmembrane transport	3.26E-03
68	GO:0043069: negative regulation of programmed cell death	3.41E-03
69	GO:0048829: root cap development	3.41E-03
70	GO:0010015: root morphogenesis	3.76E-03
71	GO:0032259: methylation	4.73E-03
72	GO:0007034: vacuolar transport	4.89E-03
73	GO:0009933: meristem structural organization	4.89E-03
74	GO:0006629: lipid metabolic process	4.99E-03
75	GO:0009408: response to heat	4.99E-03
76	GO:0090351: seedling development	5.29E-03
77	GO:0009624: response to nematode	5.34E-03
78	GO:0009737: response to abscisic acid	5.68E-03
79	GO:0006071: glycerol metabolic process	5.70E-03
80	GO:0034976: response to endoplasmic reticulum stress	5.70E-03
81	GO:0006979: response to oxidative stress	6.40E-03
82	GO:0030433: ubiquitin-dependent ERAD pathway	7.46E-03
83	GO:0006012: galactose metabolic process	7.92E-03
84	GO:0042147: retrograde transport, endosome to Golgi	8.88E-03
85	GO:0034220: ion transmembrane transport	9.38E-03
86	GO:0010118: stomatal movement	9.38E-03
87	GO:0042631: cellular response to water deprivation	9.38E-03
88	GO:0071472: cellular response to salt stress	9.89E-03
89	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.03E-02
90	GO:0006508: proteolysis	1.07E-02
91	GO:0019252: starch biosynthetic process	1.09E-02
92	GO:0006623: protein targeting to vacuole	1.09E-02
93	GO:0055114: oxidation-reduction process	1.14E-02
94	GO:0010193: response to ozone	1.15E-02
95	GO:0010583: response to cyclopentenone	1.20E-02
96	GO:0007264: small GTPase mediated signal transduction	1.20E-02
97	GO:0030163: protein catabolic process	1.26E-02
98	GO:0010252: auxin homeostasis	1.31E-02
99	GO:0009816: defense response to bacterium, incompatible interaction	1.55E-02
100	GO:0010029: regulation of seed germination	1.55E-02
101	GO:0006974: cellular response to DNA damage stimulus	1.61E-02
102	GO:0006888: ER to Golgi vesicle-mediated transport	1.67E-02
103	GO:0006950: response to stress	1.67E-02
104	GO:0010311: lateral root formation	1.86E-02
105	GO:0048767: root hair elongation	1.86E-02
106	GO:0006499: N-terminal protein myristoylation	1.92E-02
107	GO:0009407: toxin catabolic process	1.92E-02
108	GO:0010119: regulation of stomatal movement	1.99E-02
109	GO:0007568: aging	1.99E-02
110	GO:0009910: negative regulation of flower development	1.99E-02
111	GO:0045892: negative regulation of transcription, DNA-templated	2.16E-02
112	GO:0006099: tricarboxylic acid cycle	2.19E-02
113	GO:0006839: mitochondrial transport	2.33E-02
114	GO:0006631: fatty acid metabolic process	2.40E-02
115	GO:0042542: response to hydrogen peroxide	2.47E-02
116	GO:0009744: response to sucrose	2.54E-02
117	GO:0051707: response to other organism	2.54E-02
118	GO:0016042: lipid catabolic process	2.55E-02
119	GO:0009636: response to toxic substance	2.76E-02
120	GO:0009965: leaf morphogenesis	2.76E-02
121	GO:0008152: metabolic process	2.89E-02
122	GO:0009733: response to auxin	2.92E-02
123	GO:0009846: pollen germination	2.99E-02
124	GO:0009909: regulation of flower development	3.38E-02
125	GO:0048367: shoot system development	3.63E-02
126	GO:0009626: plant-type hypersensitive response	3.71E-02
127	GO:0042545: cell wall modification	3.96E-02
128	GO:0006810: transport	4.06E-02
129	GO:0018105: peptidyl-serine phosphorylation	4.13E-02
130	GO:0000398: mRNA splicing, via spliceosome	4.47E-02

Rank	GO Term	Adjusted P value
1	GO:0003846: 2-acylglycerol O-acyltransferase activity	0.00E+00
2	GO:0015930: glutamate synthase activity	0.00E+00
3	GO:0042030: ATPase inhibitor activity	0.00E+00
4	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
5	GO:0004622: lysophospholipase activity	0.00E+00
6	GO:0005496: steroid binding	1.90E-05
7	GO:0031593: polyubiquitin binding	2.87E-05
8	GO:0016041: glutamate synthase (ferredoxin) activity	1.16E-04
9	GO:0090430: caffeoyl-CoA: alcohol caffeoyl transferase activity	1.16E-04
10	GO:0004112: cyclic-nucleotide phosphodiesterase activity	1.16E-04
11	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	1.16E-04
12	GO:0008171: O-methyltransferase activity	1.59E-04
13	GO:0004061: arylformamidase activity	2.69E-04
14	GO:0019172: glyoxalase III activity	2.69E-04
15	GO:0015036: disulfide oxidoreductase activity	2.69E-04
16	GO:0008517: folic acid transporter activity	2.69E-04
17	GO:0003994: aconitate hydratase activity	2.69E-04
18	GO:0050833: pyruvate transmembrane transporter activity	4.45E-04
19	GO:0003840: gamma-glutamyltransferase activity	4.45E-04
20	GO:0036374: glutathione hydrolase activity	4.45E-04
21	GO:0016805: dipeptidase activity	4.45E-04
22	GO:0005093: Rab GDP-dissociation inhibitor activity	4.45E-04
23	GO:0008276: protein methyltransferase activity	6.38E-04
24	GO:0001653: peptide receptor activity	6.38E-04
25	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	6.38E-04
26	GO:0010279: indole-3-acetic acid amido synthetase activity	8.47E-04
27	GO:0004301: epoxide hydrolase activity	8.47E-04
28	GO:0004197: cysteine-type endopeptidase activity	9.98E-04
29	GO:0031386: protein tag	1.07E-03
30	GO:0051538: 3 iron, 4 sulfur cluster binding	1.07E-03
31	GO:0047714: galactolipase activity	1.31E-03
32	GO:0036402: proteasome-activating ATPase activity	1.31E-03
33	GO:0003978: UDP-glucose 4-epimerase activity	1.56E-03
34	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	1.56E-03
35	GO:0004656: procollagen-proline 4-dioxygenase activity	1.56E-03
36	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	1.56E-03
37	GO:0102391: decanoate--CoA ligase activity	1.56E-03
38	GO:0004747: ribokinase activity	1.56E-03
39	GO:0016787: hydrolase activity	1.58E-03
40	GO:0016887: ATPase activity	1.76E-03
41	GO:0005215: transporter activity	1.80E-03
42	GO:0004620: phospholipase activity	1.84E-03
43	GO:0004467: long-chain fatty acid-CoA ligase activity	1.84E-03
44	GO:0008235: metalloexopeptidase activity	1.84E-03
45	GO:0008865: fructokinase activity	2.13E-03
46	GO:0052747: sinapyl alcohol dehydrogenase activity	2.13E-03
47	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	2.43E-03
48	GO:0016491: oxidoreductase activity	2.45E-03
49	GO:0004364: glutathione transferase activity	2.69E-03
50	GO:0008889: glycerophosphodiester phosphodiesterase activity	2.74E-03
51	GO:0047617: acyl-CoA hydrolase activity	3.07E-03
52	GO:0008794: arsenate reductase (glutaredoxin) activity	3.76E-03
53	GO:0004177: aminopeptidase activity	3.76E-03
54	GO:0008559: xenobiotic-transporting ATPase activity	3.76E-03
55	GO:0045551: cinnamyl-alcohol dehydrogenase activity	4.13E-03
56	GO:0008234: cysteine-type peptidase activity	4.16E-03
57	GO:0005315: inorganic phosphate transmembrane transporter activity	4.50E-03
58	GO:0015114: phosphate ion transmembrane transporter activity	4.50E-03
59	GO:0017025: TBP-class protein binding	5.29E-03
60	GO:0031418: L-ascorbic acid binding	6.12E-03
61	GO:0043424: protein histidine kinase binding	6.56E-03
62	GO:0004298: threonine-type endopeptidase activity	7.00E-03
63	GO:0008194: UDP-glycosyltransferase activity	1.03E-02
64	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.17E-02
65	GO:0005515: protein binding	1.31E-02
66	GO:0008483: transaminase activity	1.37E-02
67	GO:0008168: methyltransferase activity	1.38E-02
68	GO:0015250: water channel activity	1.49E-02
69	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.61E-02
70	GO:0004683: calmodulin-dependent protein kinase activity	1.67E-02
71	GO:0004806: triglyceride lipase activity	1.67E-02
72	GO:0005096: GTPase activator activity	1.86E-02
73	GO:0015238: drug transmembrane transporter activity	1.86E-02
74	GO:0030145: manganese ion binding	1.99E-02
75	GO:0005524: ATP binding	2.03E-02
76	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.12E-02
77	GO:0005509: calcium ion binding	2.28E-02
78	GO:0051539: 4 iron, 4 sulfur cluster binding	2.33E-02
79	GO:0045330: aspartyl esterase activity	3.38E-02
80	GO:0008270: zinc ion binding	3.64E-02
81	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.79E-02
82	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.79E-02
83	GO:0030599: pectinesterase activity	3.87E-02
84	GO:0015035: protein disulfide oxidoreductase activity	4.13E-02
85	GO:0016758: transferase activity, transferring hexosyl groups	4.65E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0005829: cytosol	1.89E-08
3	GO:0000502: proteasome complex	3.39E-05
4	GO:0005773: vacuole	7.17E-05
5	GO:0008540: proteasome regulatory particle, base subcomplex	1.34E-04
6	GO:0031314: extrinsic component of mitochondrial inner membrane	2.69E-04
7	GO:0005764: lysosome	2.81E-04
8	GO:0005794: Golgi apparatus	3.78E-04
9	GO:0005783: endoplasmic reticulum	6.18E-04
10	GO:0005771: multivesicular body	1.31E-03
11	GO:0030127: COPII vesicle coat	1.31E-03
12	GO:0030904: retromer complex	1.31E-03
13	GO:0031597: cytosolic proteasome complex	1.56E-03
14	GO:0031595: nuclear proteasome complex	1.84E-03
15	GO:0031305: integral component of mitochondrial inner membrane	2.13E-03
16	GO:0005777: peroxisome	2.67E-03
17	GO:0005774: vacuolar membrane	4.07E-03
18	GO:0016602: CCAAT-binding factor complex	4.50E-03
19	GO:0005839: proteasome core complex	7.00E-03
20	GO:0005886: plasma membrane	9.30E-03
21	GO:0005615: extracellular space	1.03E-02
22	GO:0071944: cell periphery	1.26E-02
23	GO:0005737: cytoplasm	1.54E-02
24	GO:0005618: cell wall	1.66E-02
25	GO:0000325: plant-type vacuole	1.99E-02
26	GO:0005819: spindle	2.26E-02
27	GO:0016020: membrane	2.30E-02
28	GO:0031902: late endosome membrane	2.40E-02
29	GO:0005743: mitochondrial inner membrane	2.44E-02
30	GO:0005635: nuclear envelope	3.30E-02
31	GO:0010008: endosome membrane	3.63E-02
32	GO:0005834: heterotrimeric G-protein complex	3.71E-02
33	GO:0009524: phragmoplast	4.92E-02