Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G08540

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0042821: pyridoxal biosynthetic process0.00E+00
2GO:0005996: monosaccharide metabolic process0.00E+00
3GO:0070272: proton-transporting ATP synthase complex biogenesis0.00E+00
4GO:0070125: mitochondrial translational elongation0.00E+00
5GO:0097164: ammonium ion metabolic process0.00E+00
6GO:0034337: RNA folding0.00E+00
7GO:0006223: uracil salvage0.00E+00
8GO:0090042: tubulin deacetylation0.00E+00
9GO:0042593: glucose homeostasis0.00E+00
10GO:0006429: leucyl-tRNA aminoacylation0.00E+00
11GO:0018023: peptidyl-lysine trimethylation0.00E+00
12GO:0016553: base conversion or substitution editing0.00E+00
13GO:0060416: response to growth hormone0.00E+00
14GO:0010275: NAD(P)H dehydrogenase complex assembly0.00E+00
15GO:0042820: vitamin B6 catabolic process0.00E+00
16GO:0002184: cytoplasmic translational termination0.00E+00
17GO:0099131: ATP hydrolysis coupled ion transmembrane transport0.00E+00
18GO:1904966: positive regulation of vitamin E biosynthetic process0.00E+00
19GO:1901918: negative regulation of exoribonuclease activity0.00E+00
20GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate0.00E+00
21GO:1904964: positive regulation of phytol biosynthetic process0.00E+00
22GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation0.00E+00
23GO:0042371: vitamin K biosynthetic process0.00E+00
24GO:0033494: ferulate metabolic process0.00E+00
25GO:1901698: response to nitrogen compound0.00E+00
26GO:2000121: regulation of removal of superoxide radicals0.00E+00
27GO:0061635: regulation of protein complex stability0.00E+00
28GO:1902326: positive regulation of chlorophyll biosynthetic process0.00E+00
29GO:0006428: isoleucyl-tRNA aminoacylation0.00E+00
30GO:0006642: triglyceride mobilization0.00E+00
31GO:0015995: chlorophyll biosynthetic process1.95E-20
32GO:0032544: plastid translation6.70E-20
33GO:0015979: photosynthesis4.51E-17
34GO:0009658: chloroplast organization3.06E-11
35GO:0006412: translation6.88E-11
36GO:0010207: photosystem II assembly6.46E-10
37GO:0009735: response to cytokinin7.35E-10
38GO:0010027: thylakoid membrane organization5.84E-08
39GO:0006782: protoporphyrinogen IX biosynthetic process1.14E-07
40GO:0042254: ribosome biogenesis2.03E-07
41GO:0090391: granum assembly2.45E-06
42GO:0009773: photosynthetic electron transport in photosystem I6.04E-06
43GO:0009409: response to cold6.38E-06
44GO:0019253: reductive pentose-phosphate cycle1.76E-05
45GO:0010206: photosystem II repair4.09E-05
46GO:0006783: heme biosynthetic process4.09E-05
47GO:0032502: developmental process4.62E-05
48GO:0055114: oxidation-reduction process4.88E-05
49GO:0032543: mitochondrial translation5.78E-05
50GO:0006779: porphyrin-containing compound biosynthetic process5.86E-05
51GO:0034755: iron ion transmembrane transport8.17E-05
52GO:0018026: peptidyl-lysine monomethylation8.17E-05
53GO:0006655: phosphatidylglycerol biosynthetic process1.00E-04
54GO:1901259: chloroplast rRNA processing1.58E-04
55GO:0010019: chloroplast-nucleus signaling pathway1.58E-04
56GO:0006006: glucose metabolic process1.78E-04
57GO:0009772: photosynthetic electron transport in photosystem II2.31E-04
58GO:0010196: nonphotochemical quenching2.31E-04
59GO:0006518: peptide metabolic process2.39E-04
60GO:0042255: ribosome assembly3.20E-04
61GO:0009793: embryo development ending in seed dormancy4.22E-04
62GO:0009657: plastid organization4.24E-04
63GO:0006633: fatty acid biosynthetic process4.92E-04
64GO:0006546: glycine catabolic process7.46E-04
65GO:0009765: photosynthesis, light harvesting7.46E-04
66GO:0045727: positive regulation of translation7.46E-04
67GO:0009416: response to light stimulus8.66E-04
68GO:0018298: protein-chromophore linkage9.83E-04
69GO:0018119: peptidyl-cysteine S-nitrosylation1.01E-03
70GO:0000413: protein peptidyl-prolyl isomerization1.05E-03
71GO:0016123: xanthophyll biosynthetic process1.09E-03
72GO:0045038: protein import into chloroplast thylakoid membrane1.09E-03
73GO:0016024: CDP-diacylglycerol biosynthetic process1.21E-03
74GO:0009767: photosynthetic electron transport chain1.43E-03
75GO:1902458: positive regulation of stomatal opening1.48E-03
76GO:0000476: maturation of 4.5S rRNA1.48E-03
77GO:0009443: pyridoxal 5'-phosphate salvage1.48E-03
78GO:0000967: rRNA 5'-end processing1.48E-03
79GO:0046520: sphingoid biosynthetic process1.48E-03
80GO:0006824: cobalt ion transport1.48E-03
81GO:0070509: calcium ion import1.48E-03
82GO:0007263: nitric oxide mediated signal transduction1.48E-03
83GO:0046166: glyceraldehyde-3-phosphate biosynthetic process1.48E-03
84GO:0043489: RNA stabilization1.48E-03
85GO:0071588: hydrogen peroxide mediated signaling pathway1.48E-03
86GO:0010729: positive regulation of hydrogen peroxide biosynthetic process1.48E-03
87GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process1.48E-03
88GO:0006434: seryl-tRNA aminoacylation1.48E-03
89GO:0060627: regulation of vesicle-mediated transport1.48E-03
90GO:0010442: guard cell morphogenesis1.48E-03
91GO:0071370: cellular response to gibberellin stimulus1.48E-03
92GO:0000481: maturation of 5S rRNA1.48E-03
93GO:0042547: cell wall modification involved in multidimensional cell growth1.48E-03
94GO:0071461: cellular response to redox state1.48E-03
95GO:0006438: valyl-tRNA aminoacylation1.48E-03
96GO:0006096: glycolytic process1.49E-03
97GO:0042549: photosystem II stabilization1.51E-03
98GO:0010190: cytochrome b6f complex assembly1.51E-03
99GO:0042742: defense response to bacterium1.58E-03
100GO:0045454: cell redox homeostasis1.68E-03
101GO:0010167: response to nitrate1.96E-03
102GO:0042372: phylloquinone biosynthetic process2.01E-03
103GO:0006636: unsaturated fatty acid biosynthetic process2.26E-03
104GO:0006821: chloride transport2.58E-03
105GO:0010444: guard mother cell differentiation2.58E-03
106GO:0006418: tRNA aminoacylation for protein translation2.95E-03
107GO:0006353: DNA-templated transcription, termination3.24E-03
108GO:0006729: tetrahydrobiopterin biosynthetic process3.29E-03
109GO:1903426: regulation of reactive oxygen species biosynthetic process3.29E-03
110GO:0080005: photosystem stoichiometry adjustment3.29E-03
111GO:0006521: regulation of cellular amino acid metabolic process3.29E-03
112GO:0019388: galactose catabolic process3.29E-03
113GO:0030388: fructose 1,6-bisphosphate metabolic process3.29E-03
114GO:1900871: chloroplast mRNA modification3.29E-03
115GO:0070981: L-asparagine biosynthetic process3.29E-03
116GO:0034470: ncRNA processing3.29E-03
117GO:0043039: tRNA aminoacylation3.29E-03
118GO:0052541: plant-type cell wall cellulose metabolic process3.29E-03
119GO:1904143: positive regulation of carotenoid biosynthetic process3.29E-03
120GO:0080148: negative regulation of response to water deprivation3.29E-03
121GO:0006529: asparagine biosynthetic process3.29E-03
122GO:0042128: nitrate assimilation3.48E-03
123GO:0010411: xyloglucan metabolic process3.78E-03
124GO:0009932: cell tip growth3.97E-03
125GO:0071482: cellular response to light stimulus3.97E-03
126GO:0009306: protein secretion4.70E-03
127GO:0016117: carotenoid biosynthetic process5.23E-03
128GO:0006013: mannose metabolic process5.50E-03
129GO:0032504: multicellular organism reproduction5.50E-03
130GO:0006954: inflammatory response5.50E-03
131GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition5.50E-03
132GO:0015840: urea transport5.50E-03
133GO:0071705: nitrogen compound transport5.50E-03
134GO:0019563: glycerol catabolic process5.50E-03
135GO:0045493: xylan catabolic process5.50E-03
136GO:0006000: fructose metabolic process5.50E-03
137GO:2001295: malonyl-CoA biosynthetic process5.50E-03
138GO:0010205: photoinhibition5.69E-03
139GO:0080022: primary root development5.79E-03
140GO:0006810: transport5.87E-03
141GO:0045490: pectin catabolic process6.50E-03
142GO:0019684: photosynthesis, light reaction7.76E-03
143GO:0043085: positive regulation of catalytic activity7.76E-03
144GO:0006352: DNA-templated transcription, initiation7.76E-03
145GO:0006165: nucleoside diphosphate phosphorylation8.08E-03
146GO:0006228: UTP biosynthetic process8.08E-03
147GO:0009800: cinnamic acid biosynthetic process8.08E-03
148GO:0009052: pentose-phosphate shunt, non-oxidative branch8.08E-03
149GO:1902476: chloride transmembrane transport8.08E-03
150GO:0009226: nucleotide-sugar biosynthetic process8.08E-03
151GO:0051513: regulation of monopolar cell growth8.08E-03
152GO:0016556: mRNA modification8.08E-03
153GO:0071484: cellular response to light intensity8.08E-03
154GO:0010731: protein glutathionylation8.08E-03
155GO:0006424: glutamyl-tRNA aminoacylation8.08E-03
156GO:0046739: transport of virus in multicellular host8.08E-03
157GO:0009152: purine ribonucleotide biosynthetic process8.08E-03
158GO:0046653: tetrahydrofolate metabolic process8.08E-03
159GO:0009590: detection of gravity8.08E-03
160GO:0006241: CTP biosynthetic process8.08E-03
161GO:0055070: copper ion homeostasis8.08E-03
162GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis8.08E-03
163GO:0080170: hydrogen peroxide transmembrane transport8.08E-03
164GO:2001141: regulation of RNA biosynthetic process8.08E-03
165GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity8.08E-03
166GO:0080167: response to karrikin8.57E-03
167GO:0015706: nitrate transport8.93E-03
168GO:0006094: gluconeogenesis1.02E-02
169GO:2000122: negative regulation of stomatal complex development1.10E-02
170GO:0030104: water homeostasis1.10E-02
171GO:0015976: carbon utilization1.10E-02
172GO:0044206: UMP salvage1.10E-02
173GO:0006749: glutathione metabolic process1.10E-02
174GO:0006021: inositol biosynthetic process1.10E-02
175GO:0019464: glycine decarboxylation via glycine cleavage system1.10E-02
176GO:0071249: cellular response to nitrate1.10E-02
177GO:0071483: cellular response to blue light1.10E-02
178GO:0006183: GTP biosynthetic process1.10E-02
179GO:0015994: chlorophyll metabolic process1.10E-02
180GO:0010037: response to carbon dioxide1.10E-02
181GO:0006808: regulation of nitrogen utilization1.10E-02
182GO:0010030: positive regulation of seed germination1.30E-02
183GO:0006461: protein complex assembly1.42E-02
184GO:0016120: carotene biosynthetic process1.42E-02
185GO:0043097: pyrimidine nucleoside salvage1.42E-02
186GO:0006564: L-serine biosynthetic process1.42E-02
187GO:0010236: plastoquinone biosynthetic process1.42E-02
188GO:0009247: glycolipid biosynthetic process1.42E-02
189GO:0031365: N-terminal protein amino acid modification1.42E-02
190GO:0034052: positive regulation of plant-type hypersensitive response1.42E-02
191GO:0035434: copper ion transmembrane transport1.42E-02
192GO:0006833: water transport1.45E-02
193GO:0009790: embryo development1.49E-02
194GO:0019344: cysteine biosynthetic process1.62E-02
195GO:0006559: L-phenylalanine catabolic process1.78E-02
196GO:0006751: glutathione catabolic process1.78E-02
197GO:0006206: pyrimidine nucleobase metabolic process1.78E-02
198GO:0007035: vacuolar acidification1.78E-02
199GO:0032973: amino acid export1.78E-02
200GO:0018258: protein O-linked glycosylation via hydroxyproline1.78E-02
201GO:1902456: regulation of stomatal opening1.78E-02
202GO:0042793: transcription from plastid promoter1.78E-02
203GO:0046855: inositol phosphate dephosphorylation1.78E-02
204GO:0006086: acetyl-CoA biosynthetic process from pyruvate1.78E-02
205GO:0009117: nucleotide metabolic process1.78E-02
206GO:0016554: cytidine to uridine editing1.78E-02
207GO:0010405: arabinogalactan protein metabolic process1.78E-02
208GO:0009768: photosynthesis, light harvesting in photosystem I1.79E-02
209GO:0061077: chaperone-mediated protein folding1.97E-02
210GO:0010555: response to mannitol2.16E-02
211GO:0009814: defense response, incompatible interaction2.16E-02
212GO:0009407: toxin catabolic process2.16E-02
213GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2.16E-02
214GO:0009955: adaxial/abaxial pattern specification2.16E-02
215GO:0006694: steroid biosynthetic process2.16E-02
216GO:0030488: tRNA methylation2.16E-02
217GO:0010189: vitamin E biosynthetic process2.16E-02
218GO:0009854: oxidative photosynthetic carbon pathway2.16E-02
219GO:0009831: plant-type cell wall modification involved in multidimensional cell growth2.36E-02
220GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.47E-02
221GO:0009610: response to symbiotic fungus2.57E-02
222GO:0050829: defense response to Gram-negative bacterium2.57E-02
223GO:0009395: phospholipid catabolic process2.57E-02
224GO:0009645: response to low light intensity stimulus2.57E-02
225GO:0043090: amino acid import2.57E-02
226GO:0006400: tRNA modification2.57E-02
227GO:0006614: SRP-dependent cotranslational protein targeting to membrane2.57E-02
228GO:0008380: RNA splicing2.68E-02
229GO:0034599: cellular response to oxidative stress2.73E-02
230GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.79E-02
231GO:0009231: riboflavin biosynthetic process3.00E-02
232GO:0043068: positive regulation of programmed cell death3.00E-02
233GO:0009690: cytokinin metabolic process3.00E-02
234GO:0048564: photosystem I assembly3.00E-02
235GO:0006605: protein targeting3.00E-02
236GO:0019375: galactolipid biosynthetic process3.00E-02
237GO:0010078: maintenance of root meristem identity3.00E-02
238GO:0009704: de-etiolation3.00E-02
239GO:0032508: DNA duplex unwinding3.00E-02
240GO:2000070: regulation of response to water deprivation3.00E-02
241GO:0005978: glycogen biosynthetic process3.00E-02
242GO:0010492: maintenance of shoot apical meristem identity3.00E-02
243GO:0009819: drought recovery3.00E-02
244GO:0009642: response to light intensity3.00E-02
245GO:0042631: cellular response to water deprivation3.01E-02
246GO:0034220: ion transmembrane transport3.01E-02
247GO:0010087: phloem or xylem histogenesis3.01E-02
248GO:0030001: metal ion transport3.04E-02
249GO:0009958: positive gravitropism3.25E-02
250GO:0009741: response to brassinosteroid3.25E-02
251GO:0009808: lignin metabolic process3.45E-02
252GO:0010497: plasmodesmata-mediated intercellular transport3.45E-02
253GO:0009699: phenylpropanoid biosynthetic process3.45E-02
254GO:0006002: fructose 6-phosphate metabolic process3.45E-02
255GO:0006526: arginine biosynthetic process3.45E-02
256GO:0043562: cellular response to nitrogen levels3.45E-02
257GO:0017004: cytochrome complex assembly3.45E-02
258GO:0009646: response to absence of light3.50E-02
259GO:0010114: response to red light3.55E-02
260GO:0042546: cell wall biogenesis3.73E-02
261GO:0019252: starch biosynthetic process3.75E-02
262GO:0009821: alkaloid biosynthetic process3.92E-02
263GO:0048507: meristem development3.92E-02
264GO:0080144: amino acid homeostasis3.92E-02
265GO:0009051: pentose-phosphate shunt, oxidative branch3.92E-02
266GO:0000373: Group II intron splicing3.92E-02
267GO:0000302: response to reactive oxygen species4.02E-02
268GO:0009636: response to toxic substance4.11E-02
269GO:0042744: hydrogen peroxide catabolic process4.30E-02
270GO:0032259: methylation4.40E-02
271GO:0031146: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process4.42E-02
272GO:0009638: phototropism4.42E-02
273GO:1900865: chloroplast RNA modification4.42E-02
274GO:0009828: plant-type cell wall loosening4.86E-02
275GO:0006949: syncytium formation4.93E-02
276GO:0009870: defense response signaling pathway, resistance gene-dependent4.93E-02
277GO:0006535: cysteine biosynthetic process from serine4.93E-02
278GO:0043069: negative regulation of programmed cell death4.93E-02
RankGO TermAdjusted P value
1GO:0051721: protein phosphatase 2A binding0.00E+00
2GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity0.00E+00
3GO:0042903: tubulin deacetylase activity0.00E+00
4GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity0.00E+00
5GO:0061634: alpha-D-xyloside xylohydrolase0.00E+00
6GO:0045435: lycopene epsilon cyclase activity0.00E+00
7GO:0004822: isoleucine-tRNA ligase activity0.00E+00
8GO:0004853: uroporphyrinogen decarboxylase activity0.00E+00
9GO:0008887: glycerate kinase activity0.00E+00
10GO:0045550: geranylgeranyl reductase activity0.00E+00
11GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity0.00E+00
12GO:0048307: ferredoxin-nitrite reductase activity0.00E+00
13GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity0.00E+00
14GO:0005048: signal sequence binding0.00E+00
15GO:0047889: ferredoxin-nitrate reductase activity0.00E+00
16GO:0050614: delta24-sterol reductase activity0.00E+00
17GO:0009974: zeinoxanthin epsilon hydroxylase activity0.00E+00
18GO:0050278: sedoheptulose-bisphosphatase activity0.00E+00
19GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity0.00E+00
20GO:0043014: alpha-tubulin binding0.00E+00
21GO:0080176: xyloglucan 1,6-alpha-xylosidase activity0.00E+00
22GO:0005222: intracellular cAMP activated cation channel activity0.00E+00
23GO:0050421: nitrite reductase (NO-forming) activity0.00E+00
24GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity0.00E+00
25GO:0046406: magnesium protoporphyrin IX methyltransferase activity0.00E+00
26GO:0004823: leucine-tRNA ligase activity0.00E+00
27GO:0047513: 1,2-alpha-L-fucosidase activity0.00E+00
28GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity0.00E+00
29GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
30GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity0.00E+00
31GO:0050236: pyridoxine:NADP 4-dehydrogenase activity0.00E+00
32GO:0016631: enoyl-[acyl-carrier-protein] reductase activity0.00E+00
33GO:0015038: glutathione disulfide oxidoreductase activity0.00E+00
34GO:0046408: chlorophyll synthetase activity0.00E+00
35GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity0.00E+00
36GO:0008942: nitrite reductase [NAD(P)H] activity0.00E+00
37GO:0000979: RNA polymerase II core promoter sequence-specific DNA binding0.00E+00
38GO:0019843: rRNA binding2.13E-30
39GO:0003735: structural constituent of ribosome1.63E-13
40GO:0003755: peptidyl-prolyl cis-trans isomerase activity8.23E-12
41GO:0005528: FK506 binding3.25E-09
42GO:0051920: peroxiredoxin activity5.41E-06
43GO:0016851: magnesium chelatase activity1.08E-05
44GO:0016209: antioxidant activity1.72E-05
45GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity8.17E-05
46GO:0031072: heat shock protein binding1.78E-04
47GO:0008266: poly(U) RNA binding2.23E-04
48GO:0019899: enzyme binding2.31E-04
49GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor2.39E-04
50GO:0002161: aminoacyl-tRNA editing activity2.39E-04
51GO:0016168: chlorophyll binding6.72E-04
52GO:0001053: plastid sigma factor activity7.46E-04
53GO:0043495: protein anchor7.46E-04
54GO:0004045: aminoacyl-tRNA hydrolase activity7.46E-04
55GO:0016987: sigma factor activity7.46E-04
56GO:0016279: protein-lysine N-methyltransferase activity7.46E-04
57GO:0003727: single-stranded RNA binding8.19E-04
58GO:0003989: acetyl-CoA carboxylase activity1.09E-03
59GO:0003959: NADPH dehydrogenase activity1.09E-03
60GO:0010347: L-galactose-1-phosphate phosphatase activity1.48E-03
61GO:0004071: aspartate-ammonia ligase activity1.48E-03
62GO:0009671: nitrate:proton symporter activity1.48E-03
63GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity1.48E-03
64GO:0045485: omega-6 fatty acid desaturase activity1.48E-03
65GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity1.48E-03
66GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity1.48E-03
67GO:0000170: sphingosine hydroxylase activity1.48E-03
68GO:0009374: biotin binding1.48E-03
69GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity1.48E-03
70GO:0046906: tetrapyrrole binding1.48E-03
71GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity1.48E-03
72GO:0030794: (S)-coclaurine-N-methyltransferase activity1.48E-03
73GO:0015200: methylammonium transmembrane transporter activity1.48E-03
74GO:0004560: alpha-L-fucosidase activity1.48E-03
75GO:0004807: triose-phosphate isomerase activity1.48E-03
76GO:0004832: valine-tRNA ligase activity1.48E-03
77GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity1.48E-03
78GO:0004828: serine-tRNA ligase activity1.48E-03
79GO:0004328: formamidase activity1.48E-03
80GO:0080132: fatty acid alpha-hydroxylase activity1.48E-03
81GO:0004655: porphobilinogen synthase activity1.48E-03
82GO:0005221: intracellular cyclic nucleotide activated cation channel activity1.48E-03
83GO:0005247: voltage-gated chloride channel activity1.51E-03
84GO:0004130: cytochrome-c peroxidase activity1.51E-03
85GO:0004601: peroxidase activity1.81E-03
86GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity2.01E-03
87GO:0051537: 2 iron, 2 sulfur cluster binding2.74E-03
88GO:0004033: aldo-keto reductase (NADP) activity3.24E-03
89GO:0052833: inositol monophosphate 4-phosphatase activity3.29E-03
90GO:0004618: phosphoglycerate kinase activity3.29E-03
91GO:0010297: heteropolysaccharide binding3.29E-03
92GO:0003839: gamma-glutamylcyclotransferase activity3.29E-03
93GO:0080097: L-tryptophan:pyruvate aminotransferase activity3.29E-03
94GO:0016630: protochlorophyllide reductase activity3.29E-03
95GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity3.29E-03
96GO:0009977: proton motive force dependent protein transmembrane transporter activity3.29E-03
97GO:0004617: phosphoglycerate dehydrogenase activity3.29E-03
98GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity3.29E-03
99GO:0008967: phosphoglycolate phosphatase activity3.29E-03
100GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity3.29E-03
101GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity3.29E-03
102GO:0004614: phosphoglucomutase activity3.29E-03
103GO:0004047: aminomethyltransferase activity3.29E-03
104GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase3.29E-03
105GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity3.29E-03
106GO:0052832: inositol monophosphate 3-phosphatase activity3.29E-03
107GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity3.29E-03
108GO:0008883: glutamyl-tRNA reductase activity3.29E-03
109GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity3.29E-03
110GO:0042284: sphingolipid delta-4 desaturase activity3.29E-03
111GO:0008934: inositol monophosphate 1-phosphatase activity3.29E-03
112GO:0047746: chlorophyllase activity3.29E-03
113GO:0042389: omega-3 fatty acid desaturase activity3.29E-03
114GO:0051287: NAD binding3.36E-03
115GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water3.97E-03
116GO:0016491: oxidoreductase activity4.07E-03
117GO:0030570: pectate lyase activity4.22E-03
118GO:0022891: substrate-specific transmembrane transporter activity4.22E-03
119GO:0004222: metalloendopeptidase activity5.16E-03
120GO:0004812: aminoacyl-tRNA ligase activity5.23E-03
121GO:0008864: formyltetrahydrofolate deformylase activity5.50E-03
122GO:0004148: dihydrolipoyl dehydrogenase activity5.50E-03
123GO:0003935: GTP cyclohydrolase II activity5.50E-03
124GO:0010277: chlorophyllide a oxygenase [overall] activity5.50E-03
125GO:0004075: biotin carboxylase activity5.50E-03
126GO:0004751: ribose-5-phosphate isomerase activity5.50E-03
127GO:0045174: glutathione dehydrogenase (ascorbate) activity5.50E-03
128GO:0016531: copper chaperone activity5.50E-03
129GO:0070330: aromatase activity5.50E-03
130GO:0030267: glyoxylate reductase (NADP) activity5.50E-03
131GO:0019829: cation-transporting ATPase activity5.50E-03
132GO:0017150: tRNA dihydrouridine synthase activity5.50E-03
133GO:0050734: hydroxycinnamoyltransferase activity5.50E-03
134GO:0016742: hydroxymethyl-, formyl- and related transferase activity5.50E-03
135GO:0045548: phenylalanine ammonia-lyase activity5.50E-03
136GO:0070402: NADPH binding5.50E-03
137GO:0016788: hydrolase activity, acting on ester bonds5.59E-03
138GO:0005381: iron ion transmembrane transporter activity5.69E-03
139GO:0050661: NADP binding7.84E-03
140GO:0035529: NADH pyrophosphatase activity8.08E-03
141GO:0008097: 5S rRNA binding8.08E-03
142GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity8.08E-03
143GO:0035250: UDP-galactosyltransferase activity8.08E-03
144GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor8.08E-03
145GO:0048487: beta-tubulin binding8.08E-03
146GO:0016149: translation release factor activity, codon specific8.08E-03
147GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity8.08E-03
148GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides8.08E-03
149GO:0004375: glycine dehydrogenase (decarboxylating) activity8.08E-03
150GO:0004550: nucleoside diphosphate kinase activity8.08E-03
151GO:0043023: ribosomal large subunit binding8.08E-03
152GO:0016762: xyloglucan:xyloglucosyl transferase activity8.40E-03
153GO:0004364: glutathione transferase activity8.91E-03
154GO:0004845: uracil phosphoribosyltransferase activity1.10E-02
155GO:0009044: xylan 1,4-beta-xylosidase activity1.10E-02
156GO:0004345: glucose-6-phosphate dehydrogenase activity1.10E-02
157GO:0016836: hydro-lyase activity1.10E-02
158GO:0005253: anion channel activity1.10E-02
159GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity1.10E-02
160GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity1.10E-02
161GO:0046556: alpha-L-arabinofuranosidase activity1.10E-02
162GO:1990137: plant seed peroxidase activity1.10E-02
163GO:0015204: urea transmembrane transporter activity1.10E-02
164GO:0004659: prenyltransferase activity1.10E-02
165GO:0016722: oxidoreductase activity, oxidizing metal ions1.17E-02
166GO:0016597: amino acid binding1.26E-02
167GO:0015250: water channel activity1.36E-02
168GO:0016773: phosphotransferase activity, alcohol group as acceptor1.42E-02
169GO:0004040: amidase activity1.42E-02
170GO:0008725: DNA-3-methyladenine glycosylase activity1.42E-02
171GO:0030414: peptidase inhibitor activity1.42E-02
172GO:0003723: RNA binding1.42E-02
173GO:0018685: alkane 1-monooxygenase activity1.42E-02
174GO:0016846: carbon-sulfur lyase activity1.42E-02
175GO:0031409: pigment binding1.45E-02
176GO:0003690: double-stranded DNA binding1.58E-02
177GO:0051536: iron-sulfur cluster binding1.62E-02
178GO:0016798: hydrolase activity, acting on glycosyl bonds1.67E-02
179GO:0004366: glycerol-3-phosphate O-acyltransferase activity1.78E-02
180GO:0042578: phosphoric ester hydrolase activity1.78E-02
181GO:0004605: phosphatidate cytidylyltransferase activity1.78E-02
182GO:0080030: methyl indole-3-acetate esterase activity1.78E-02
183GO:0016208: AMP binding1.78E-02
184GO:1990714: hydroxyproline O-galactosyltransferase activity1.78E-02
185GO:0016462: pyrophosphatase activity1.78E-02
186GO:0016688: L-ascorbate peroxidase activity1.78E-02
187GO:0008200: ion channel inhibitor activity1.78E-02
188GO:0008519: ammonium transmembrane transporter activity1.78E-02
189GO:0005242: inward rectifier potassium channel activity2.16E-02
190GO:0005261: cation channel activity2.16E-02
191GO:0051753: mannan synthase activity2.16E-02
192GO:0004849: uridine kinase activity2.16E-02
193GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity2.16E-02
194GO:0004124: cysteine synthase activity2.16E-02
195GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity2.16E-02
196GO:0004559: alpha-mannosidase activity2.16E-02
197GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds2.47E-02
198GO:0051082: unfolded protein binding2.55E-02
199GO:0003756: protein disulfide isomerase activity2.57E-02
200GO:0008235: metalloexopeptidase activity2.57E-02
201GO:0043295: glutathione binding2.57E-02
202GO:0003993: acid phosphatase activity2.73E-02
203GO:0005509: calcium ion binding2.75E-02
204GO:0052689: carboxylic ester hydrolase activity2.79E-02
205GO:0004564: beta-fructofuranosidase activity3.00E-02
206GO:0008312: 7S RNA binding3.00E-02
207GO:0004034: aldose 1-epimerase activity3.00E-02
208GO:0005375: copper ion transmembrane transporter activity3.45E-02
209GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)3.45E-02
210GO:0050662: coenzyme binding3.50E-02
211GO:0016787: hydrolase activity3.69E-02
212GO:0008168: methyltransferase activity3.89E-02
213GO:0003747: translation release factor activity3.92E-02
214GO:0008889: glycerophosphodiester phosphodiesterase activity3.92E-02
215GO:0048038: quinone binding4.02E-02
216GO:0004252: serine-type endopeptidase activity4.14E-02
217GO:0015112: nitrate transmembrane transporter activity4.42E-02
218GO:0004575: sucrose alpha-glucosidase activity4.42E-02
219GO:0016844: strictosidine synthase activity4.42E-02
220GO:0000156: phosphorelay response regulator activity4.57E-02
221GO:0003729: mRNA binding4.71E-02
222GO:0008047: enzyme activator activity4.93E-02
223GO:0004805: trehalose-phosphatase activity4.93E-02
224GO:0004864: protein phosphatase inhibitor activity4.93E-02
RankGO TermAdjusted P value
1GO:0009575: chromoplast stroma0.00E+00
2GO:0005943: phosphatidylinositol 3-kinase complex, class IA0.00E+00
3GO:0044391: ribosomal subunit0.00E+00
4GO:0009571: proplastid stroma0.00E+00
5GO:0009515: granal stacked thylakoid0.00E+00
6GO:0009344: nitrite reductase complex [NAD(P)H]0.00E+00
7GO:0005835: fatty acid synthase complex0.00E+00
8GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex0.00E+00
9GO:0009507: chloroplast3.35E-151
10GO:0009570: chloroplast stroma5.18E-89
11GO:0009941: chloroplast envelope1.17E-74
12GO:0009535: chloroplast thylakoid membrane1.21E-74
13GO:0009534: chloroplast thylakoid1.58E-52
14GO:0009579: thylakoid2.37E-47
15GO:0009543: chloroplast thylakoid lumen1.75E-41
16GO:0031977: thylakoid lumen1.22E-22
17GO:0005840: ribosome5.42E-15
18GO:0031969: chloroplast membrane2.00E-12
19GO:0009654: photosystem II oxygen evolving complex3.58E-12
20GO:0048046: apoplast5.53E-10
21GO:0030095: chloroplast photosystem II6.46E-10
22GO:0019898: extrinsic component of membrane6.92E-09
23GO:0009505: plant-type cell wall4.85E-08
24GO:0009536: plastid1.80E-07
25GO:0000311: plastid large ribosomal subunit3.27E-07
26GO:0009706: chloroplast inner membrane4.02E-07
27GO:0010319: stromule5.70E-07
28GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)1.48E-06
29GO:0010007: magnesium chelatase complex2.45E-06
30GO:0042651: thylakoid membrane3.39E-06
31GO:0009533: chloroplast stromal thylakoid1.01E-05
32GO:0016020: membrane2.88E-05
33GO:0009523: photosystem II3.19E-05
34GO:0009295: nucleoid7.61E-05
35GO:0000427: plastid-encoded plastid RNA polymerase complex8.17E-05
36GO:0009508: plastid chromosome1.78E-04
37GO:0046658: anchored component of plasma membrane3.87E-04
38GO:0030529: intracellular ribonucleoprotein complex6.07E-04
39GO:0005618: cell wall6.41E-04
40GO:0010287: plastoglobule8.81E-04
41GO:0015934: large ribosomal subunit1.27E-03
42GO:0009782: photosystem I antenna complex1.48E-03
43GO:0043674: columella1.48E-03
44GO:0009547: plastid ribosome1.48E-03
45GO:0031225: anchored component of membrane1.50E-03
46GO:0034707: chloride channel complex1.51E-03
47GO:0000312: plastid small ribosomal subunit1.68E-03
48GO:0042807: central vacuole2.58E-03
49GO:0042170: plastid membrane3.29E-03
50GO:0080085: signal recognition particle, chloroplast targeting3.29E-03
51GO:0015935: small ribosomal subunit3.34E-03
52GO:0009509: chromoplast5.50E-03
53GO:0033281: TAT protein transport complex5.50E-03
54GO:0009317: acetyl-CoA carboxylase complex5.50E-03
55GO:0005960: glycine cleavage complex8.08E-03
56GO:0005775: vacuolar lumen8.08E-03
57GO:0042646: plastid nucleoid8.08E-03
58GO:0032040: small-subunit processome8.93E-03
59GO:0030076: light-harvesting complex1.30E-02
60GO:0000220: vacuolar proton-transporting V-type ATPase, V0 domain1.42E-02
61GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1)1.78E-02
62GO:0005762: mitochondrial large ribosomal subunit2.16E-02
63GO:0016363: nuclear matrix2.16E-02
64GO:0009538: photosystem I reaction center3.00E-02
65GO:0000326: protein storage vacuole3.45E-02
66GO:0009539: photosystem II reaction center3.45E-02
67GO:0005786: signal recognition particle, endoplasmic reticulum targeting3.45E-02
68GO:0005811: lipid particle3.45E-02
69GO:0009522: photosystem I3.50E-02
70GO:0005763: mitochondrial small ribosomal subunit3.92E-02
71GO:0005774: vacuolar membrane4.88E-02
72GO:0016459: myosin complex4.93E-02
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Gene type



Gene DE type