Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G07990

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0016236: macroautophagy0.00E+00
2GO:0006987: activation of signaling protein activity involved in unfolded protein response0.00E+00
3GO:0006914: autophagy1.55E-05
4GO:0034214: protein hexamerization5.34E-05
5GO:0031338: regulation of vesicle fusion5.34E-05
6GO:0071806: protein transmembrane transport5.34E-05
7GO:0010201: response to continuous far red light stimulus by the high-irradiance response system5.34E-05
8GO:0030242: pexophagy5.34E-05
9GO:0000303: response to superoxide5.34E-05
10GO:0015969: guanosine tetraphosphate metabolic process5.34E-05
11GO:0006970: response to osmotic stress6.97E-05
12GO:0051258: protein polymerization1.30E-04
13GO:0006468: protein phosphorylation1.69E-04
14GO:0090630: activation of GTPase activity2.22E-04
15GO:0051259: protein oligomerization3.25E-04
16GO:0006623: protein targeting to vacuole3.25E-04
17GO:0006809: nitric oxide biosynthetic process3.25E-04
18GO:0010508: positive regulation of autophagy4.35E-04
19GO:0045324: late endosome to vacuole transport4.35E-04
20GO:0042594: response to starvation4.35E-04
21GO:0009816: defense response to bacterium, incompatible interaction5.28E-04
22GO:0006751: glutathione catabolic process6.76E-04
23GO:0009723: response to ethylene7.70E-04
24GO:0000911: cytokinesis by cell plate formation8.05E-04
25GO:0015937: coenzyme A biosynthetic process9.40E-04
26GO:0006333: chromatin assembly or disassembly9.40E-04
27GO:0009610: response to symbiotic fungus9.40E-04
28GO:0030968: endoplasmic reticulum unfolded protein response1.23E-03
29GO:0043069: negative regulation of programmed cell death1.71E-03
30GO:0006896: Golgi to vacuole transport1.71E-03
31GO:0019538: protein metabolic process1.71E-03
32GO:0015031: protein transport1.87E-03
33GO:0010072: primary shoot apical meristem specification1.88E-03
34GO:0009698: phenylpropanoid metabolic process1.88E-03
35GO:0012501: programmed cell death2.06E-03
36GO:0010102: lateral root morphogenesis2.25E-03
37GO:0006626: protein targeting to mitochondrion2.25E-03
38GO:0007034: vacuolar transport2.43E-03
39GO:0010053: root epidermal cell differentiation2.63E-03
40GO:0009825: multidimensional cell growth2.63E-03
41GO:0035556: intracellular signal transduction2.98E-03
42GO:2000377: regulation of reactive oxygen species metabolic process3.03E-03
43GO:0030150: protein import into mitochondrial matrix3.03E-03
44GO:0006825: copper ion transport3.24E-03
45GO:0010150: leaf senescence3.30E-03
46GO:0031348: negative regulation of defense response3.68E-03
47GO:0006470: protein dephosphorylation3.77E-03
48GO:0009737: response to abscisic acid4.10E-03
49GO:0010197: polar nucleus fusion4.84E-03
50GO:0010193: response to ozone5.60E-03
51GO:0010583: response to cyclopentenone5.86E-03
52GO:0016032: viral process5.86E-03
53GO:0010200: response to chitin6.52E-03
54GO:0010286: heat acclimation6.66E-03
55GO:0071805: potassium ion transmembrane transport6.66E-03
56GO:0046777: protein autophosphorylation6.74E-03
57GO:0006979: response to oxidative stress6.86E-03
58GO:0051607: defense response to virus6.94E-03
59GO:0006950: response to stress8.09E-03
60GO:0010119: regulation of stomatal movement9.61E-03
61GO:0009867: jasmonic acid mediated signaling pathway1.02E-02
62GO:0009873: ethylene-activated signaling pathway1.20E-02
63GO:0009846: pollen germination1.44E-02
64GO:0006813: potassium ion transport1.51E-02
65GO:0006417: regulation of translation1.63E-02
66GO:0016310: phosphorylation2.12E-02
67GO:0009790: embryo development2.55E-02
68GO:0040008: regulation of growth2.77E-02
69GO:0008380: RNA splicing3.25E-02
70GO:0010468: regulation of gene expression3.25E-02
71GO:0009414: response to water deprivation3.28E-02
72GO:0042742: defense response to bacterium3.36E-02
73GO:0045944: positive regulation of transcription from RNA polymerase II promoter3.71E-02
74GO:0009733: response to auxin3.77E-02
75GO:0009409: response to cold4.53E-02
76GO:0006351: transcription, DNA-templated4.65E-02
77GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway4.67E-02
78GO:0006355: regulation of transcription, DNA-templated4.88E-02
RankGO TermAdjusted P value
1GO:0017168: 5-oxoprolinase (ATP-hydrolyzing) activity0.00E+00
2GO:0033550: MAP kinase tyrosine phosphatase activity0.00E+00
3GO:0009940: amino-terminal vacuolar sorting propeptide binding0.00E+00
4GO:0010209: vacuolar sorting signal binding5.34E-05
5GO:0030544: Hsp70 protein binding5.34E-05
6GO:0001077: transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding1.30E-04
7GO:0008728: GTP diphosphokinase activity1.30E-04
8GO:0003958: NADPH-hemoprotein reductase activity1.30E-04
9GO:0004594: pantothenate kinase activity1.30E-04
10GO:0005524: ATP binding2.11E-04
11GO:0019829: cation-transporting ATPase activity2.22E-04
12GO:0030527: structural constituent of chromatin3.25E-04
13GO:0016301: kinase activity3.61E-04
14GO:0017137: Rab GTPase binding5.52E-04
15GO:0004866: endopeptidase inhibitor activity6.76E-04
16GO:0003950: NAD+ ADP-ribosyltransferase activity8.05E-04
17GO:0004712: protein serine/threonine/tyrosine kinase activity8.82E-04
18GO:0005375: copper ion transmembrane transporter activity1.23E-03
19GO:0004713: protein tyrosine kinase activity1.71E-03
20GO:0004521: endoribonuclease activity2.06E-03
21GO:0015266: protein channel activity2.25E-03
22GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism2.25E-03
23GO:0004672: protein kinase activity2.33E-03
24GO:0004725: protein tyrosine phosphatase activity2.83E-03
25GO:0043130: ubiquitin binding3.03E-03
26GO:0015079: potassium ion transmembrane transporter activity3.24E-03
27GO:0043424: protein histidine kinase binding3.24E-03
28GO:0019706: protein-cysteine S-palmitoyltransferase activity3.46E-03
29GO:0004707: MAP kinase activity3.46E-03
30GO:0005515: protein binding3.75E-03
31GO:0004674: protein serine/threonine kinase activity3.93E-03
32GO:0005516: calmodulin binding4.67E-03
33GO:0010181: FMN binding5.09E-03
34GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor6.12E-03
35GO:0042803: protein homodimerization activity7.91E-03
36GO:0004722: protein serine/threonine phosphatase activity8.28E-03
37GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity8.68E-03
38GO:0005096: GTPase activator activity8.99E-03
39GO:0050661: NADP binding1.12E-02
40GO:0005198: structural molecule activity1.33E-02
41GO:0046982: protein heterodimerization activity3.86E-02
42GO:0003682: chromatin binding4.07E-02
43GO:0050660: flavin adenine dinucleotide binding4.34E-02
RankGO TermAdjusted P value
1GO:0071561: nucleus-vacuole junction0.00E+00
2GO:0034272: phosphatidylinositol 3-kinase complex, class III, type II5.34E-05
3GO:0034271: phosphatidylinositol 3-kinase complex, class III, type I5.34E-05
4GO:0042406: extrinsic component of endoplasmic reticulum membrane2.22E-04
5GO:0005770: late endosome2.81E-04
6GO:0016363: nuclear matrix8.05E-04
7GO:0031305: integral component of mitochondrial inner membrane1.08E-03
8GO:0034045: pre-autophagosomal structure membrane1.23E-03
9GO:0030665: clathrin-coated vesicle membrane1.54E-03
10GO:0017119: Golgi transport complex1.71E-03
11GO:0005886: plasma membrane3.16E-03
12GO:0005744: mitochondrial inner membrane presequence translocase complex4.13E-03
13GO:0030136: clathrin-coated vesicle4.36E-03
14GO:0005622: intracellular5.76E-03
15GO:0000785: chromatin5.86E-03
16GO:0005783: endoplasmic reticulum7.23E-03
17GO:0005643: nuclear pore8.68E-03
18GO:0031902: late endosome membrane1.16E-02
19GO:0005789: endoplasmic reticulum membrane1.17E-02
20GO:0012505: endomembrane system1.90E-02
21GO:0005634: nucleus2.02E-02
22GO:0009506: plasmodesma2.17E-02
23GO:0005829: cytosol2.23E-02
24GO:0005623: cell2.32E-02
25GO:0005802: trans-Golgi network2.66E-02
26GO:0046658: anchored component of plasma membrane3.50E-02
27GO:0080008: Cul4-RING E3 ubiquitin ligase complex4.18E-02
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Gene type



Gene DE type