Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G07630

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0009991: response to extracellular stimulus0.00E+00
2GO:0000169: activation of MAPK activity involved in osmosensory signaling pathway0.00E+00
3GO:0060154: cellular process regulating host cell cycle in response to virus0.00E+00
4GO:0010477: response to sulfur dioxide0.00E+00
5GO:0009867: jasmonic acid mediated signaling pathway5.50E-05
6GO:0051410: detoxification of nitrogen compound5.79E-05
7GO:0031338: regulation of vesicle fusion5.79E-05
8GO:0010201: response to continuous far red light stimulus by the high-irradiance response system5.79E-05
9GO:0048482: plant ovule morphogenesis5.79E-05
10GO:0019499: cyanide metabolic process5.79E-05
11GO:0000303: response to superoxide5.79E-05
12GO:0080136: priming of cellular response to stress5.79E-05
13GO:0010102: lateral root morphogenesis9.21E-05
14GO:2000693: positive regulation of seed maturation1.41E-04
15GO:0030010: establishment of cell polarity1.41E-04
16GO:0002240: response to molecule of oomycetes origin1.41E-04
17GO:0006468: protein phosphorylation2.30E-04
18GO:0090630: activation of GTPase activity2.40E-04
19GO:0046621: negative regulation of organ growth2.40E-04
20GO:0006517: protein deglycosylation2.40E-04
21GO:0006013: mannose metabolic process2.40E-04
22GO:0009790: embryo development3.42E-04
23GO:0010104: regulation of ethylene-activated signaling pathway3.49E-04
24GO:0006809: nitric oxide biosynthetic process3.49E-04
25GO:2000038: regulation of stomatal complex development4.66E-04
26GO:0006878: cellular copper ion homeostasis4.66E-04
27GO:0051123: RNA polymerase II transcriptional preinitiation complex assembly4.66E-04
28GO:0015994: chlorophyll metabolic process4.66E-04
29GO:0010468: regulation of gene expression5.31E-04
30GO:0043097: pyrimidine nucleoside salvage5.92E-04
31GO:0006950: response to stress6.49E-04
32GO:1900425: negative regulation of defense response to bacterium7.24E-04
33GO:0048317: seed morphogenesis7.24E-04
34GO:0006206: pyrimidine nucleobase metabolic process7.24E-04
35GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione7.24E-04
36GO:0048527: lateral root development8.23E-04
37GO:2000037: regulation of stomatal complex patterning8.63E-04
38GO:0000911: cytokinesis by cell plate formation8.63E-04
39GO:0043966: histone H3 acetylation8.63E-04
40GO:0009610: response to symbiotic fungus1.01E-03
41GO:0043068: positive regulation of programmed cell death1.16E-03
42GO:0032875: regulation of DNA endoreduplication1.16E-03
43GO:0006491: N-glycan processing1.16E-03
44GO:0006886: intracellular protein transport1.24E-03
45GO:0010120: camalexin biosynthetic process1.32E-03
46GO:0030968: endoplasmic reticulum unfolded protein response1.32E-03
47GO:0009880: embryonic pattern specification1.32E-03
48GO:0042538: hyperosmotic salinity response1.42E-03
49GO:0090333: regulation of stomatal closure1.48E-03
50GO:0009821: alkaloid biosynthetic process1.48E-03
51GO:0009736: cytokinin-activated signaling pathway1.52E-03
52GO:0051603: proteolysis involved in cellular protein catabolic process1.57E-03
53GO:0048364: root development1.63E-03
54GO:0042761: very long-chain fatty acid biosynthetic process1.65E-03
55GO:2000280: regulation of root development1.65E-03
56GO:0009626: plant-type hypersensitive response1.90E-03
57GO:0072593: reactive oxygen species metabolic process2.02E-03
58GO:0006352: DNA-templated transcription, initiation2.02E-03
59GO:0010072: primary shoot apical meristem specification2.02E-03
60GO:0006790: sulfur compound metabolic process2.21E-03
61GO:0012501: programmed cell death2.21E-03
62GO:0051726: regulation of cell cycle2.27E-03
63GO:0010229: inflorescence development2.41E-03
64GO:0055046: microgametogenesis2.41E-03
65GO:0009887: animal organ morphogenesis2.62E-03
66GO:0042343: indole glucosinolate metabolic process2.82E-03
67GO:0009825: multidimensional cell growth2.82E-03
68GO:2000377: regulation of reactive oxygen species metabolic process3.26E-03
69GO:0006487: protein N-linked glycosylation3.26E-03
70GO:0016575: histone deacetylation3.49E-03
71GO:0098542: defense response to other organism3.72E-03
72GO:0061077: chaperone-mediated protein folding3.72E-03
73GO:0031348: negative regulation of defense response3.95E-03
74GO:0007166: cell surface receptor signaling pathway4.20E-03
75GO:0010227: floral organ abscission4.20E-03
76GO:0071215: cellular response to abscisic acid stimulus4.20E-03
77GO:0009561: megagametogenesis4.44E-03
78GO:0007165: signal transduction4.67E-03
79GO:0042631: cellular response to water deprivation4.95E-03
80GO:0010197: polar nucleus fusion5.21E-03
81GO:0010154: fruit development5.21E-03
82GO:0006623: protein targeting to vacuole5.75E-03
83GO:0010183: pollen tube guidance5.75E-03
84GO:0006891: intra-Golgi vesicle-mediated transport6.02E-03
85GO:0048510: regulation of timing of transition from vegetative to reproductive phase6.02E-03
86GO:0002229: defense response to oomycetes6.02E-03
87GO:0010193: response to ozone6.02E-03
88GO:0006970: response to osmotic stress6.10E-03
89GO:0016032: viral process6.31E-03
90GO:0009723: response to ethylene6.55E-03
91GO:0030163: protein catabolic process6.59E-03
92GO:0006914: autophagy6.88E-03
93GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway7.26E-03
94GO:0010200: response to chitin7.26E-03
95GO:0046777: protein autophosphorylation7.50E-03
96GO:0044550: secondary metabolite biosynthetic process7.63E-03
97GO:0009615: response to virus7.78E-03
98GO:0009788: negative regulation of abscisic acid-activated signaling pathway8.08E-03
99GO:0009816: defense response to bacterium, incompatible interaction8.08E-03
100GO:0016567: protein ubiquitination8.30E-03
101GO:0042128: nitrate assimilation8.40E-03
102GO:0048573: photoperiodism, flowering8.71E-03
103GO:0009817: defense response to fungus, incompatible interaction9.36E-03
104GO:0048481: plant ovule development9.36E-03
105GO:0000209: protein polyubiquitination1.36E-02
106GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.51E-02
107GO:0010224: response to UV-B1.67E-02
108GO:0009738: abscisic acid-activated signaling pathway1.79E-02
109GO:0048367: shoot system development1.88E-02
110GO:0035556: intracellular signal transduction1.95E-02
111GO:0006952: defense response2.05E-02
112GO:0045893: positive regulation of transcription, DNA-templated2.12E-02
113GO:0006511: ubiquitin-dependent protein catabolic process2.51E-02
114GO:0009058: biosynthetic process2.55E-02
115GO:0009845: seed germination2.60E-02
116GO:0006413: translational initiation2.94E-02
117GO:0040008: regulation of growth2.99E-02
118GO:0045490: pectin catabolic process3.09E-02
119GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process3.35E-02
120GO:0009617: response to bacterium3.51E-02
121GO:0006979: response to oxidative stress3.76E-02
122GO:0030154: cell differentiation4.06E-02
123GO:0009826: unidimensional cell growth4.11E-02
RankGO TermAdjusted P value
1GO:0018822: nitrile hydratase activity0.00E+00
2GO:0008482: sulfite oxidase activity0.00E+00
3GO:0004572: mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase activity0.00E+00
4GO:0033550: MAP kinase tyrosine phosphatase activity0.00E+00
5GO:0047427: cyanoalanine nitrilase activity0.00E+00
6GO:0047558: 3-cyanoalanine hydratase activity0.00E+00
7GO:0016301: kinase activity5.03E-06
8GO:0034450: ubiquitin-ubiquitin ligase activity5.79E-05
9GO:0001102: RNA polymerase II activating transcription factor binding5.79E-05
10GO:0004674: protein serine/threonine kinase activity6.27E-05
11GO:0004707: MAP kinase activity1.87E-04
12GO:0080061: indole-3-acetonitrile nitrilase activity2.40E-04
13GO:0000257: nitrilase activity3.49E-04
14GO:0004416: hydroxyacylglutathione hydrolase activity3.49E-04
15GO:0004301: epoxide hydrolase activity4.66E-04
16GO:0030151: molybdenum ion binding5.92E-04
17GO:0017137: Rab GTPase binding5.92E-04
18GO:0046982: protein heterodimerization activity7.17E-04
19GO:0005096: GTPase activator activity7.51E-04
20GO:0004559: alpha-mannosidase activity8.63E-04
21GO:0003950: NAD+ ADP-ribosyltransferase activity8.63E-04
22GO:0004849: uridine kinase activity8.63E-04
23GO:0005524: ATP binding8.79E-04
24GO:0005515: protein binding9.40E-04
25GO:0004714: transmembrane receptor protein tyrosine kinase activity1.16E-03
26GO:0004869: cysteine-type endopeptidase inhibitor activity1.16E-03
27GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)1.32E-03
28GO:0045309: protein phosphorylated amino acid binding1.65E-03
29GO:0019904: protein domain specific binding2.02E-03
30GO:0017025: TBP-class protein binding2.82E-03
31GO:0004725: protein tyrosine phosphatase activity3.04E-03
32GO:0004407: histone deacetylase activity3.26E-03
33GO:0043130: ubiquitin binding3.26E-03
34GO:0005528: FK506 binding3.26E-03
35GO:0008270: zinc ion binding4.12E-03
36GO:0030246: carbohydrate binding4.64E-03
37GO:0004402: histone acetyltransferase activity4.95E-03
38GO:0004197: cysteine-type endopeptidase activity6.31E-03
39GO:0051213: dioxygenase activity7.78E-03
40GO:0030247: polysaccharide binding8.71E-03
41GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen9.08E-03
42GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.11E-02
43GO:0004842: ubiquitin-protein transferase activity1.18E-02
44GO:0004712: protein serine/threonine/tyrosine kinase activity1.18E-02
45GO:0004672: protein kinase activity1.27E-02
46GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.47E-02
47GO:0045735: nutrient reservoir activity1.84E-02
48GO:0016874: ligase activity2.01E-02
49GO:0016787: hydrolase activity2.05E-02
50GO:0019825: oxygen binding2.63E-02
51GO:0005516: calmodulin binding2.78E-02
52GO:0008565: protein transporter activity2.80E-02
53GO:0003677: DNA binding3.40E-02
54GO:0003743: translation initiation factor activity3.46E-02
55GO:0005506: iron ion binding3.68E-02
56GO:0016491: oxidoreductase activity4.90E-02
RankGO TermAdjusted P value
1GO:0000124: SAGA complex1.41E-04
2GO:0016363: nuclear matrix8.63E-04
3GO:0005886: plasma membrane1.04E-03
4GO:0005669: transcription factor TFIID complex1.16E-03
5GO:0030665: clathrin-coated vesicle membrane1.65E-03
6GO:0017119: Golgi transport complex1.83E-03
7GO:0016602: CCAAT-binding factor complex2.41E-03
8GO:0005795: Golgi stack2.82E-03
9GO:0030136: clathrin-coated vesicle4.69E-03
10GO:0005622: intracellular6.60E-03
11GO:0005634: nucleus7.50E-03
12GO:0005783: endoplasmic reticulum8.75E-03
13GO:0000151: ubiquitin ligase complex9.36E-03
14GO:0000139: Golgi membrane1.15E-02
15GO:0031902: late endosome membrane1.25E-02
16GO:0005789: endoplasmic reticulum membrane1.34E-02
17GO:0005635: nuclear envelope1.71E-02
18GO:0016021: integral component of membrane1.84E-02
19GO:0005834: heterotrimeric G-protein complex1.92E-02
20GO:0012505: endomembrane system2.05E-02
21GO:0005623: cell2.51E-02
22GO:0005802: trans-Golgi network2.96E-02
23GO:0005768: endosome3.36E-02
24GO:0005794: Golgi apparatus4.31E-02
25GO:0080008: Cul4-RING E3 ubiquitin ligase complex4.51E-02
<
Gene type



Gene DE type