Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G06230

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0031334: positive regulation of protein complex assembly0.00E+00
2GO:0034724: DNA replication-independent nucleosome organization6.06E-06
3GO:0048358: mucilage pectin biosynthetic process6.06E-06
4GO:0010393: galacturonan metabolic process6.06E-06
5GO:0034728: nucleosome organization6.06E-06
6GO:0097298: regulation of nucleus size6.06E-06
7GO:1900036: positive regulation of cellular response to heat6.06E-06
8GO:0010228: vegetative to reproductive phase transition of meristem6.33E-06
9GO:0016584: nucleosome positioning1.65E-05
10GO:0071217: cellular response to external biotic stimulus1.65E-05
11GO:0002221: pattern recognition receptor signaling pathway1.65E-05
12GO:0046898: response to cycloheximide1.65E-05
13GO:0043044: ATP-dependent chromatin remodeling3.04E-05
14GO:0010272: response to silver ion3.04E-05
15GO:0016049: cell growth3.49E-05
16GO:0010587: miRNA catabolic process4.72E-05
17GO:0080001: mucilage extrusion from seed coat4.72E-05
18GO:0032968: positive regulation of transcription elongation from RNA polymerase II promoter6.61E-05
19GO:0009908: flower development6.73E-05
20GO:1902183: regulation of shoot apical meristem development8.72E-05
21GO:0048359: mucilage metabolic process involved in seed coat development8.72E-05
22GO:0047484: regulation of response to osmotic stress1.10E-04
23GO:0031053: primary miRNA processing1.10E-04
24GO:1901001: negative regulation of response to salt stress1.34E-04
25GO:1902074: response to salt1.60E-04
26GO:0045995: regulation of embryonic development1.60E-04
27GO:0006368: transcription elongation from RNA polymerase II promoter1.60E-04
28GO:0006997: nucleus organization2.14E-04
29GO:0009827: plant-type cell wall modification2.14E-04
30GO:2000024: regulation of leaf development2.43E-04
31GO:0005982: starch metabolic process2.72E-04
32GO:0010018: far-red light signaling pathway2.72E-04
33GO:0007166: cell surface receptor signaling pathway2.77E-04
34GO:0008380: RNA splicing2.89E-04
35GO:0010192: mucilage biosynthetic process3.02E-04
36GO:0042753: positive regulation of circadian rhythm4.98E-04
37GO:0009944: polarity specification of adaxial/abaxial axis5.33E-04
38GO:0045892: negative regulation of transcription, DNA-templated5.58E-04
39GO:0010073: meristem maintenance5.68E-04
40GO:0048511: rhythmic process6.04E-04
41GO:0009561: megagametogenesis7.14E-04
42GO:0010051: xylem and phloem pattern formation7.91E-04
43GO:0008360: regulation of cell shape8.30E-04
44GO:0042752: regulation of circadian rhythm8.70E-04
45GO:0048510: regulation of timing of transition from vegetative to reproductive phase9.49E-04
46GO:0002229: defense response to oomycetes9.49E-04
47GO:0032502: developmental process9.90E-04
48GO:0009639: response to red or far red light1.07E-03
49GO:0001666: response to hypoxia1.20E-03
50GO:0009816: defense response to bacterium, incompatible interaction1.25E-03
51GO:0006974: cellular response to DNA damage stimulus1.29E-03
52GO:0045893: positive regulation of transcription, DNA-templated1.32E-03
53GO:0008219: cell death1.43E-03
54GO:0009817: defense response to fungus, incompatible interaction1.43E-03
55GO:0048767: root hair elongation1.47E-03
56GO:0045087: innate immune response1.67E-03
57GO:0006897: endocytosis1.87E-03
58GO:0009414: response to water deprivation2.24E-03
59GO:0006260: DNA replication2.25E-03
60GO:0042742: defense response to bacterium2.29E-03
61GO:0006979: response to oxidative stress2.31E-03
62GO:0006364: rRNA processing2.41E-03
63GO:0009585: red, far-red light phototransduction2.41E-03
64GO:0009909: regulation of flower development2.58E-03
65GO:0009620: response to fungus2.88E-03
66GO:0016569: covalent chromatin modification2.94E-03
67GO:0009553: embryo sac development3.00E-03
68GO:0009624: response to nematode3.06E-03
69GO:0018105: peptidyl-serine phosphorylation3.12E-03
70GO:0009742: brassinosteroid mediated signaling pathway3.18E-03
71GO:0000398: mRNA splicing, via spliceosome3.37E-03
72GO:0009790: embryo development3.95E-03
73GO:0009617: response to bacterium5.00E-03
74GO:0046777: protein autophosphorylation7.28E-03
75GO:0006281: DNA repair9.11E-03
76GO:0006397: mRNA processing9.38E-03
77GO:0009611: response to wounding1.39E-02
78GO:0030154: cell differentiation2.40E-02
79GO:0009733: response to auxin2.45E-02
80GO:0009737: response to abscisic acid3.87E-02
81GO:0009793: embryo development ending in seed dormancy4.11E-02
82GO:0050832: defense response to fungus4.90E-02
RankGO TermAdjusted P value
1GO:0045131: pre-mRNA branch point binding0.00E+00
2GO:0031491: nucleosome binding3.35E-07
3GO:0004534: 5'-3' exoribonuclease activity1.65E-05
4GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides1.34E-04
5GO:0004386: helicase activity1.49E-04
6GO:0004714: transmembrane receptor protein tyrosine kinase activity1.86E-04
7GO:0003724: RNA helicase activity2.14E-04
8GO:0004675: transmembrane receptor protein serine/threonine kinase activity2.25E-04
9GO:0005515: protein binding3.68E-04
10GO:0008094: DNA-dependent ATPase activity6.04E-04
11GO:0033612: receptor serine/threonine kinase binding6.04E-04
12GO:0003713: transcription coactivator activity8.30E-04
13GO:0004004: ATP-dependent RNA helicase activity1.34E-03
14GO:0004674: protein serine/threonine kinase activity1.60E-03
15GO:0042393: histone binding1.82E-03
16GO:0008270: zinc ion binding2.57E-03
17GO:0004672: protein kinase activity3.34E-03
18GO:0005524: ATP binding3.93E-03
19GO:0046982: protein heterodimerization activity5.91E-03
20GO:0016301: kinase activity7.57E-03
21GO:0016887: ATPase activity1.24E-02
22GO:0003677: DNA binding4.09E-02
RankGO TermAdjusted P value
1GO:0035101: FACT complex1.65E-05
2GO:0005652: nuclear lamina3.04E-05
3GO:0005634: nucleus4.18E-05
4GO:0005719: nuclear euchromatin4.72E-05
5GO:0010369: chromocenter1.34E-04
6GO:0034399: nuclear periphery1.86E-04
7GO:0043234: protein complex4.98E-04
8GO:0031965: nuclear membrane9.08E-04
9GO:0005681: spliceosomal complex2.70E-03
10GO:0010008: endosome membrane2.76E-03
11GO:0005654: nucleoplasm3.50E-03
12GO:0005768: endosome2.09E-02
13GO:0005730: nucleolus3.28E-02
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Gene type



Gene DE type