co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G05720

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006983: ER overload response	0.00E+00
2	GO:0006069: ethanol oxidation	0.00E+00
3	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
4	GO:0006592: ornithine biosynthetic process	0.00E+00
5	GO:0046292: formaldehyde metabolic process	0.00E+00
6	GO:0043201: response to leucine	0.00E+00
7	GO:1901017: negative regulation of potassium ion transmembrane transporter activity	0.00E+00
8	GO:0080052: response to histidine	0.00E+00
9	GO:0080053: response to phenylalanine	0.00E+00
10	GO:0002376: immune system process	0.00E+00
11	GO:0045747: positive regulation of Notch signaling pathway	0.00E+00
12	GO:0010360: negative regulation of anion channel activity	0.00E+00
13	GO:0030149: sphingolipid catabolic process	0.00E+00
14	GO:0045454: cell redox homeostasis	2.49E-10
15	GO:0034976: response to endoplasmic reticulum stress	1.96E-08
16	GO:0000162: tryptophan biosynthetic process	5.10E-05
17	GO:0006564: L-serine biosynthetic process	5.85E-05
18	GO:0006099: tricarboxylic acid cycle	7.67E-05
19	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	8.60E-05
20	GO:0010150: leaf senescence	1.20E-04
21	GO:0046686: response to cadmium ion	1.36E-04
22	GO:0006979: response to oxidative stress	1.66E-04
23	GO:0006102: isocitrate metabolic process	2.00E-04
24	GO:0046244: salicylic acid catabolic process	2.27E-04
25	GO:0006772: thiamine metabolic process	2.27E-04
26	GO:0035266: meristem growth	2.27E-04
27	GO:0007292: female gamete generation	2.27E-04
28	GO:1902361: mitochondrial pyruvate transmembrane transport	2.27E-04
29	GO:0010230: alternative respiration	2.27E-04
30	GO:1901183: positive regulation of camalexin biosynthetic process	2.27E-04
31	GO:0000302: response to reactive oxygen species	2.28E-04
32	GO:0006511: ubiquitin-dependent protein catabolic process	2.60E-04
33	GO:0043069: negative regulation of programmed cell death	4.18E-04
34	GO:0007154: cell communication	5.05E-04
35	GO:0008535: respiratory chain complex IV assembly	5.05E-04
36	GO:0019441: tryptophan catabolic process to kynurenine	5.05E-04
37	GO:0051262: protein tetramerization	5.05E-04
38	GO:0051788: response to misfolded protein	5.05E-04
39	GO:0006101: citrate metabolic process	5.05E-04
40	GO:0043066: negative regulation of apoptotic process	5.05E-04
41	GO:0006850: mitochondrial pyruvate transport	5.05E-04
42	GO:0019752: carboxylic acid metabolic process	5.05E-04
43	GO:0042939: tripeptide transport	5.05E-04
44	GO:0010043: response to zinc ion	6.34E-04
45	GO:0090351: seedling development	7.89E-04
46	GO:0060968: regulation of gene silencing	8.21E-04
47	GO:0002230: positive regulation of defense response to virus by host	8.21E-04
48	GO:0009751: response to salicylic acid	8.34E-04
49	GO:0006457: protein folding	9.59E-04
50	GO:1902290: positive regulation of defense response to oomycetes	1.17E-03
51	GO:0001676: long-chain fatty acid metabolic process	1.17E-03
52	GO:2001289: lipid X metabolic process	1.17E-03
53	GO:0002239: response to oomycetes	1.17E-03
54	GO:0072334: UDP-galactose transmembrane transport	1.17E-03
55	GO:0009399: nitrogen fixation	1.17E-03
56	GO:0030433: ubiquitin-dependent ERAD pathway	1.27E-03
57	GO:0010188: response to microbial phytotoxin	1.56E-03
58	GO:0042938: dipeptide transport	1.56E-03
59	GO:0006542: glutamine biosynthetic process	1.56E-03
60	GO:0070534: protein K63-linked ubiquitination	1.56E-03
61	GO:0048830: adventitious root development	1.56E-03
62	GO:1902584: positive regulation of response to water deprivation	1.56E-03
63	GO:0006221: pyrimidine nucleotide biosynthetic process	1.56E-03
64	GO:0006662: glycerol ether metabolic process	1.89E-03
65	GO:0046283: anthocyanin-containing compound metabolic process	1.99E-03
66	GO:0005513: detection of calcium ion	1.99E-03
67	GO:0006097: glyoxylate cycle	1.99E-03
68	GO:0009229: thiamine diphosphate biosynthetic process	1.99E-03
69	GO:0007029: endoplasmic reticulum organization	1.99E-03
70	GO:0030308: negative regulation of cell growth	1.99E-03
71	GO:0045927: positive regulation of growth	1.99E-03
72	GO:0009697: salicylic acid biosynthetic process	1.99E-03
73	GO:0042742: defense response to bacterium	2.32E-03
74	GO:0002238: response to molecule of fungal origin	2.45E-03
75	GO:0006014: D-ribose metabolic process	2.45E-03
76	GO:0009759: indole glucosinolate biosynthetic process	2.45E-03
77	GO:0006301: postreplication repair	2.45E-03
78	GO:0048827: phyllome development	2.45E-03
79	GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation	2.45E-03
80	GO:0048232: male gamete generation	2.45E-03
81	GO:0043248: proteasome assembly	2.45E-03
82	GO:1900425: negative regulation of defense response to bacterium	2.45E-03
83	GO:0035435: phosphate ion transmembrane transport	2.45E-03
84	GO:0098655: cation transmembrane transport	2.94E-03
85	GO:0015977: carbon fixation	2.94E-03
86	GO:0034389: lipid particle organization	2.94E-03
87	GO:0009612: response to mechanical stimulus	2.94E-03
88	GO:0050790: regulation of catalytic activity	3.47E-03
89	GO:0043090: amino acid import	3.47E-03
90	GO:0080186: developmental vegetative growth	3.47E-03
91	GO:1900057: positive regulation of leaf senescence	3.47E-03
92	GO:0009627: systemic acquired resistance	3.75E-03
93	GO:0006605: protein targeting	4.02E-03
94	GO:0010078: maintenance of root meristem identity	4.02E-03
95	GO:2000070: regulation of response to water deprivation	4.02E-03
96	GO:0030091: protein repair	4.02E-03
97	GO:1900150: regulation of defense response to fungus	4.02E-03
98	GO:0008219: cell death	4.38E-03
99	GO:0006526: arginine biosynthetic process	4.60E-03
100	GO:0010204: defense response signaling pathway, resistance gene-independent	4.60E-03
101	GO:0030968: endoplasmic reticulum unfolded protein response	4.60E-03
102	GO:0010120: camalexin biosynthetic process	4.60E-03
103	GO:0009821: alkaloid biosynthetic process	5.22E-03
104	GO:0045087: innate immune response	5.54E-03
105	GO:0034599: cellular response to oxidative stress	5.79E-03
106	GO:0071577: zinc II ion transmembrane transport	5.85E-03
107	GO:1900426: positive regulation of defense response to bacterium	5.85E-03
108	GO:0010205: photoinhibition	5.85E-03
109	GO:0043067: regulation of programmed cell death	5.85E-03
110	GO:0048829: root cap development	6.51E-03
111	GO:0009641: shade avoidance	6.51E-03
112	GO:0009684: indoleacetic acid biosynthetic process	7.20E-03
113	GO:0010015: root morphogenesis	7.20E-03
114	GO:0000038: very long-chain fatty acid metabolic process	7.20E-03
115	GO:0009682: induced systemic resistance	7.20E-03
116	GO:0052544: defense response by callose deposition in cell wall	7.20E-03
117	GO:0006508: proteolysis	7.52E-03
118	GO:0016925: protein sumoylation	7.92E-03
119	GO:0009933: meristem structural organization	9.42E-03
120	GO:0051603: proteolysis involved in cellular protein catabolic process	9.98E-03
121	GO:0010039: response to iron ion	1.02E-02
122	GO:0010053: root epidermal cell differentiation	1.02E-02
123	GO:0006952: defense response	1.06E-02
124	GO:0048316: seed development	1.18E-02
125	GO:0006487: protein N-linked glycosylation	1.19E-02
126	GO:0009620: response to fungus	1.26E-02
127	GO:0009695: jasmonic acid biosynthetic process	1.27E-02
128	GO:0031408: oxylipin biosynthetic process	1.36E-02
129	GO:0031348: negative regulation of defense response	1.45E-02
130	GO:0071456: cellular response to hypoxia	1.45E-02
131	GO:0019748: secondary metabolic process	1.45E-02
132	GO:0009625: response to insect	1.54E-02
133	GO:0006012: galactose metabolic process	1.54E-02
134	GO:0019722: calcium-mediated signaling	1.64E-02
135	GO:0000413: protein peptidyl-prolyl isomerization	1.83E-02
136	GO:0042631: cellular response to water deprivation	1.83E-02
137	GO:0048868: pollen tube development	1.93E-02
138	GO:0006520: cellular amino acid metabolic process	1.93E-02
139	GO:0009790: embryo development	2.02E-02
140	GO:0009646: response to absence of light	2.03E-02
141	GO:0019252: starch biosynthetic process	2.14E-02
142	GO:0010193: response to ozone	2.24E-02
143	GO:0002229: defense response to oomycetes	2.24E-02
144	GO:0040008: regulation of growth	2.28E-02
145	GO:0009567: double fertilization forming a zygote and endosperm	2.57E-02
146	GO:0010252: auxin homeostasis	2.57E-02
147	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.67E-02
148	GO:0010286: heat acclimation	2.68E-02
149	GO:0009615: response to virus	2.91E-02
150	GO:0009607: response to biotic stimulus	3.03E-02
151	GO:0042128: nitrate assimilation	3.15E-02
152	GO:0006950: response to stress	3.27E-02
153	GO:0010311: lateral root formation	3.65E-02
154	GO:0006499: N-terminal protein myristoylation	3.77E-02
155	GO:0009407: toxin catabolic process	3.77E-02
156	GO:0007568: aging	3.90E-02
157	GO:0048527: lateral root development	3.90E-02
158	GO:0006865: amino acid transport	4.03E-02
159	GO:0016051: carbohydrate biosynthetic process	4.17E-02
160	GO:0009723: response to ethylene	4.26E-02
161	GO:0006631: fatty acid metabolic process	4.71E-02
162	GO:0010200: response to chitin	4.71E-02
163	GO:0005975: carbohydrate metabolic process	4.82E-02
164	GO:0010114: response to red light	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0008777: acetylornithine deacetylase activity	0.00E+00
2	GO:0080007: S-nitrosoglutathione reductase activity	0.00E+00
3	GO:0008117: sphinganine-1-phosphate aldolase activity	0.00E+00
4	GO:0051670: inulinase activity	0.00E+00
5	GO:0050220: prostaglandin-E synthase activity	0.00E+00
6	GO:0051903: S-(hydroxymethyl)glutathione dehydrogenase activity	0.00E+00
7	GO:0003980: UDP-glucose:glycoprotein glucosyltransferase activity	0.00E+00
8	GO:0003756: protein disulfide isomerase activity	1.01E-07
9	GO:0005496: steroid binding	5.85E-05
10	GO:0004298: threonine-type endopeptidase activity	8.13E-05
11	GO:0036402: proteasome-activating ATPase activity	8.60E-05
12	GO:0016853: isomerase activity	1.88E-04
13	GO:0004788: thiamine diphosphokinase activity	2.27E-04
14	GO:0031219: levanase activity	2.27E-04
15	GO:0004648: O-phospho-L-serine:2-oxoglutarate aminotransferase activity	2.27E-04
16	GO:0004425: indole-3-glycerol-phosphate synthase activity	2.27E-04
17	GO:0004112: cyclic-nucleotide phosphodiesterase activity	2.27E-04
18	GO:0051669: fructan beta-fructosidase activity	2.27E-04
19	GO:0004048: anthranilate phosphoribosyltransferase activity	2.27E-04
20	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	2.27E-04
21	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	2.27E-04
22	GO:0004321: fatty-acyl-CoA synthase activity	2.27E-04
23	GO:0015035: protein disulfide oxidoreductase activity	3.57E-04
24	GO:0008233: peptidase activity	4.15E-04
25	GO:0004338: glucan exo-1,3-beta-glucosidase activity	5.05E-04
26	GO:0042937: tripeptide transporter activity	5.05E-04
27	GO:0004776: succinate-CoA ligase (GDP-forming) activity	5.05E-04
28	GO:0004566: beta-glucuronidase activity	5.05E-04
29	GO:0004617: phosphoglycerate dehydrogenase activity	5.05E-04
30	GO:0003994: aconitate hydratase activity	5.05E-04
31	GO:0004775: succinate-CoA ligase (ADP-forming) activity	5.05E-04
32	GO:0004061: arylformamidase activity	5.05E-04
33	GO:0017025: TBP-class protein binding	7.89E-04
34	GO:0052692: raffinose alpha-galactosidase activity	8.21E-04
35	GO:0004557: alpha-galactosidase activity	8.21E-04
36	GO:0050833: pyruvate transmembrane transporter activity	8.21E-04
37	GO:0008964: phosphoenolpyruvate carboxylase activity	8.21E-04
38	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.17E-03
39	GO:0010279: indole-3-acetic acid amido synthetase activity	1.56E-03
40	GO:0042936: dipeptide transporter activity	1.56E-03
41	GO:0047134: protein-disulfide reductase activity	1.63E-03
42	GO:0005509: calcium ion binding	1.98E-03
43	GO:0004356: glutamate-ammonia ligase activity	1.99E-03
44	GO:0015301: anion:anion antiporter activity	1.99E-03
45	GO:0005459: UDP-galactose transmembrane transporter activity	1.99E-03
46	GO:0005452: inorganic anion exchanger activity	1.99E-03
47	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	1.99E-03
48	GO:0004791: thioredoxin-disulfide reductase activity	2.03E-03
49	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.65E-03
50	GO:0004602: glutathione peroxidase activity	2.94E-03
51	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	2.94E-03
52	GO:0102391: decanoate--CoA ligase activity	2.94E-03
53	GO:0004747: ribokinase activity	2.94E-03
54	GO:0016597: amino acid binding	3.17E-03
55	GO:0008320: protein transmembrane transporter activity	3.47E-03
56	GO:0043295: glutathione binding	3.47E-03
57	GO:0004467: long-chain fatty acid-CoA ligase activity	3.47E-03
58	GO:0016831: carboxy-lyase activity	3.47E-03
59	GO:0030247: polysaccharide binding	3.95E-03
60	GO:0004034: aldose 1-epimerase activity	4.02E-03
61	GO:0008865: fructokinase activity	4.02E-03
62	GO:0005507: copper ion binding	4.33E-03
63	GO:0016207: 4-coumarate-CoA ligase activity	5.22E-03
64	GO:0071949: FAD binding	5.22E-03
65	GO:0030955: potassium ion binding	5.85E-03
66	GO:0016844: strictosidine synthase activity	5.85E-03
67	GO:0004743: pyruvate kinase activity	5.85E-03
68	GO:0045309: protein phosphorylated amino acid binding	5.85E-03
69	GO:0004364: glutathione transferase activity	6.86E-03
70	GO:0008794: arsenate reductase (glutaredoxin) activity	7.20E-03
71	GO:0019904: protein domain specific binding	7.20E-03
72	GO:0016887: ATPase activity	7.46E-03
73	GO:0005524: ATP binding	7.46E-03
74	GO:0004022: alcohol dehydrogenase (NAD) activity	8.66E-03
75	GO:0005315: inorganic phosphate transmembrane transporter activity	8.66E-03
76	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	9.42E-03
77	GO:0016298: lipase activity	9.98E-03
78	GO:0004190: aspartic-type endopeptidase activity	1.02E-02
79	GO:0008234: cysteine-type peptidase activity	1.07E-02
80	GO:0005385: zinc ion transmembrane transporter activity	1.19E-02
81	GO:0008324: cation transmembrane transporter activity	1.27E-02
82	GO:0008810: cellulase activity	1.54E-02
83	GO:0046873: metal ion transmembrane transporter activity	1.93E-02
84	GO:0004197: cysteine-type endopeptidase activity	2.35E-02
85	GO:0008483: transaminase activity	2.68E-02
86	GO:0008237: metallopeptidase activity	2.68E-02
87	GO:0051213: dioxygenase activity	2.91E-02
88	GO:0004806: triglyceride lipase activity	3.27E-02
89	GO:0015238: drug transmembrane transporter activity	3.65E-02
90	GO:0016788: hydrolase activity, acting on ester bonds	3.75E-02
91	GO:0004222: metalloendopeptidase activity	3.77E-02
92	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.17E-02
93	GO:0000987: core promoter proximal region sequence-specific DNA binding	4.30E-02
94	GO:0016740: transferase activity	4.36E-02
95	GO:0051539: 4 iron, 4 sulfur cluster binding	4.57E-02
96	GO:0061630: ubiquitin protein ligase activity	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0000327: lytic vacuole within protein storage vacuole	0.00E+00
2	GO:0005783: endoplasmic reticulum	4.88E-14
3	GO:0005788: endoplasmic reticulum lumen	1.17E-06
4	GO:0000502: proteasome complex	1.56E-05
5	GO:0005886: plasma membrane	3.47E-05
6	GO:0005839: proteasome core complex	8.13E-05
7	GO:0031597: cytosolic proteasome complex	1.19E-04
8	GO:0031595: nuclear proteasome complex	1.57E-04
9	GO:0005773: vacuole	1.64E-04
10	GO:0005829: cytosol	1.91E-04
11	GO:0005618: cell wall	1.97E-04
12	GO:0019773: proteasome core complex, alpha-subunit complex	2.48E-04
13	GO:0008540: proteasome regulatory particle, base subcomplex	3.56E-04
14	GO:0005765: lysosomal membrane	4.83E-04
15	GO:0005789: endoplasmic reticulum membrane	4.95E-04
16	GO:0030134: ER to Golgi transport vesicle	5.05E-04
17	GO:0046861: glyoxysomal membrane	8.21E-04
18	GO:0009507: chloroplast	1.13E-03
19	GO:0031372: UBC13-MMS2 complex	1.56E-03
20	GO:0030660: Golgi-associated vesicle membrane	1.56E-03
21	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	1.56E-03
22	GO:0008250: oligosaccharyltransferase complex	1.99E-03
23	GO:0016021: integral component of membrane	2.25E-03
24	GO:0030173: integral component of Golgi membrane	2.94E-03
25	GO:0005801: cis-Golgi network	2.94E-03
26	GO:0005623: cell	3.04E-03
27	GO:0009505: plant-type cell wall	3.62E-03
28	GO:0048046: apoplast	3.94E-03
29	GO:0031305: integral component of mitochondrial inner membrane	4.02E-03
30	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	4.02E-03
31	GO:0005811: lipid particle	4.60E-03
32	GO:0000326: protein storage vacuole	4.60E-03
33	GO:0009514: glyoxysome	4.60E-03
34	GO:0009570: chloroplast stroma	6.29E-03
35	GO:0005737: cytoplasm	7.42E-03
36	GO:0031012: extracellular matrix	8.66E-03
37	GO:0005764: lysosome	9.42E-03
38	GO:0005774: vacuolar membrane	9.72E-03
39	GO:0030176: integral component of endoplasmic reticulum membrane	1.02E-02
40	GO:0005777: peroxisome	1.13E-02
41	GO:0009536: plastid	1.14E-02
42	GO:0016020: membrane	1.62E-02
43	GO:0005778: peroxisomal membrane	2.68E-02
44	GO:0031969: chloroplast membrane	4.56E-02