GO Enrichment Analysis of Co-expressed Genes with
AT1G05060
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045022: early endosome to late endosome transport | 0.00E+00 |
| 2 | GO:0032780: negative regulation of ATPase activity | 0.00E+00 |
| 3 | GO:0006482: protein demethylation | 0.00E+00 |
| 4 | GO:0010111: glyoxysome organization | 0.00E+00 |
| 5 | GO:0045053: protein retention in Golgi apparatus | 0.00E+00 |
| 6 | GO:0010265: SCF complex assembly | 4.45E-05 |
| 7 | GO:0098721: uracil import across plasma membrane | 4.45E-05 |
| 8 | GO:0006144: purine nucleobase metabolic process | 4.45E-05 |
| 9 | GO:0010201: response to continuous far red light stimulus by the high-irradiance response system | 4.45E-05 |
| 10 | GO:0098702: adenine import across plasma membrane | 4.45E-05 |
| 11 | GO:0098710: guanine import across plasma membrane | 4.45E-05 |
| 12 | GO:0048508: embryonic meristem development | 4.45E-05 |
| 13 | GO:0019628: urate catabolic process | 4.45E-05 |
| 14 | GO:0000303: response to superoxide | 4.45E-05 |
| 15 | GO:0080173: male-female gamete recognition during double fertilization | 4.45E-05 |
| 16 | GO:0035344: hypoxanthine transport | 4.45E-05 |
| 17 | GO:0009156: ribonucleoside monophosphate biosynthetic process | 1.10E-04 |
| 18 | GO:0019395: fatty acid oxidation | 1.10E-04 |
| 19 | GO:0010608: posttranscriptional regulation of gene expression | 1.10E-04 |
| 20 | GO:1905182: positive regulation of urease activity | 1.10E-04 |
| 21 | GO:0019521: D-gluconate metabolic process | 1.10E-04 |
| 22 | GO:0009945: radial axis specification | 1.10E-04 |
| 23 | GO:0006979: response to oxidative stress | 1.47E-04 |
| 24 | GO:0043617: cellular response to sucrose starvation | 1.89E-04 |
| 25 | GO:0045039: protein import into mitochondrial inner membrane | 1.89E-04 |
| 26 | GO:0006635: fatty acid beta-oxidation | 2.76E-04 |
| 27 | GO:0006882: cellular zinc ion homeostasis | 2.78E-04 |
| 28 | GO:0006624: vacuolar protein processing | 2.78E-04 |
| 29 | GO:0006809: nitric oxide biosynthetic process | 2.78E-04 |
| 30 | GO:0006878: cellular copper ion homeostasis | 3.73E-04 |
| 31 | GO:0009165: nucleotide biosynthetic process | 3.73E-04 |
| 32 | GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione | 5.82E-04 |
| 33 | GO:0009737: response to abscisic acid | 6.01E-04 |
| 34 | GO:0009867: jasmonic acid mediated signaling pathway | 6.50E-04 |
| 35 | GO:0010016: shoot system morphogenesis | 6.94E-04 |
| 36 | GO:0009942: longitudinal axis specification | 6.94E-04 |
| 37 | GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c | 8.11E-04 |
| 38 | GO:0009610: response to symbiotic fungus | 8.11E-04 |
| 39 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 8.11E-04 |
| 40 | GO:0009414: response to water deprivation | 8.87E-04 |
| 41 | GO:0006605: protein targeting | 9.32E-04 |
| 42 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 9.32E-04 |
| 43 | GO:0006972: hyperosmotic response | 1.06E-03 |
| 44 | GO:0006098: pentose-phosphate shunt | 1.19E-03 |
| 45 | GO:0048507: meristem development | 1.19E-03 |
| 46 | GO:0071577: zinc II ion transmembrane transport | 1.32E-03 |
| 47 | GO:0009651: response to salt stress | 1.32E-03 |
| 48 | GO:0010205: photoinhibition | 1.32E-03 |
| 49 | GO:0090332: stomatal closure | 1.32E-03 |
| 50 | GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway | 1.32E-03 |
| 51 | GO:0009409: response to cold | 1.44E-03 |
| 52 | GO:0010629: negative regulation of gene expression | 1.47E-03 |
| 53 | GO:0043085: positive regulation of catalytic activity | 1.61E-03 |
| 54 | GO:0006890: retrograde vesicle-mediated transport, Golgi to ER | 1.77E-03 |
| 55 | GO:0012501: programmed cell death | 1.77E-03 |
| 56 | GO:0010102: lateral root morphogenesis | 1.92E-03 |
| 57 | GO:0006807: nitrogen compound metabolic process | 1.92E-03 |
| 58 | GO:0007034: vacuolar transport | 2.09E-03 |
| 59 | GO:0009933: meristem structural organization | 2.09E-03 |
| 60 | GO:0007031: peroxisome organization | 2.25E-03 |
| 61 | GO:0007030: Golgi organization | 2.25E-03 |
| 62 | GO:2000377: regulation of reactive oxygen species metabolic process | 2.60E-03 |
| 63 | GO:0009116: nucleoside metabolic process | 2.60E-03 |
| 64 | GO:0030150: protein import into mitochondrial matrix | 2.60E-03 |
| 65 | GO:0009695: jasmonic acid biosynthetic process | 2.77E-03 |
| 66 | GO:0031408: oxylipin biosynthetic process | 2.96E-03 |
| 67 | GO:0006012: galactose metabolic process | 3.33E-03 |
| 68 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 3.73E-03 |
| 69 | GO:0010087: phloem or xylem histogenesis | 3.93E-03 |
| 70 | GO:0010197: polar nucleus fusion | 4.14E-03 |
| 71 | GO:0042752: regulation of circadian rhythm | 4.35E-03 |
| 72 | GO:0009646: response to absence of light | 4.35E-03 |
| 73 | GO:0048366: leaf development | 4.75E-03 |
| 74 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 4.77E-03 |
| 75 | GO:0010193: response to ozone | 4.77E-03 |
| 76 | GO:0016032: viral process | 4.99E-03 |
| 77 | GO:0030163: protein catabolic process | 5.22E-03 |
| 78 | GO:0006464: cellular protein modification process | 5.45E-03 |
| 79 | GO:0009816: defense response to bacterium, incompatible interaction | 6.39E-03 |
| 80 | GO:0006950: response to stress | 6.89E-03 |
| 81 | GO:0016049: cell growth | 7.14E-03 |
| 82 | GO:0006499: N-terminal protein myristoylation | 7.91E-03 |
| 83 | GO:0016051: carbohydrate biosynthetic process | 8.71E-03 |
| 84 | GO:0009873: ethylene-activated signaling pathway | 9.53E-03 |
| 85 | GO:0030001: metal ion transport | 9.55E-03 |
| 86 | GO:0006897: endocytosis | 9.83E-03 |
| 87 | GO:0042542: response to hydrogen peroxide | 1.01E-02 |
| 88 | GO:0009744: response to sucrose | 1.04E-02 |
| 89 | GO:0009644: response to high light intensity | 1.10E-02 |
| 90 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 1.19E-02 |
| 91 | GO:0042538: hyperosmotic salinity response | 1.22E-02 |
| 92 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.32E-02 |
| 93 | GO:0009626: plant-type hypersensitive response | 1.51E-02 |
| 94 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.79E-02 |
| 95 | GO:0016567: protein ubiquitination | 2.07E-02 |
| 96 | GO:0006508: proteolysis | 2.10E-02 |
| 97 | GO:0009790: embryo development | 2.16E-02 |
| 98 | GO:0055114: oxidation-reduction process | 2.25E-02 |
| 99 | GO:0007623: circadian rhythm | 2.43E-02 |
| 100 | GO:0042742: defense response to bacterium | 2.66E-02 |
| 101 | GO:0006470: protein dephosphorylation | 2.68E-02 |
| 102 | GO:0015031: protein transport | 3.38E-02 |
| 103 | GO:0006970: response to osmotic stress | 3.50E-02 |
| 104 | GO:0007049: cell cycle | 3.59E-02 |
| 105 | GO:0009723: response to ethylene | 3.68E-02 |
| 106 | GO:0045892: negative regulation of transcription, DNA-templated | 4.45E-02 |
| 107 | GO:0006886: intracellular protein transport | 4.50E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016508: long-chain-enoyl-CoA hydratase activity | 0.00E+00 |
| 2 | GO:0051723: protein methylesterase activity | 0.00E+00 |
| 3 | GO:0042030: ATPase inhibitor activity | 0.00E+00 |
| 4 | GO:0004846: urate oxidase activity | 0.00E+00 |
| 5 | GO:0004869: cysteine-type endopeptidase inhibitor activity | 1.59E-05 |
| 6 | GO:0015207: adenine transmembrane transporter activity | 4.45E-05 |
| 7 | GO:0008692: 3-hydroxybutyryl-CoA epimerase activity | 4.45E-05 |
| 8 | GO:0015208: guanine transmembrane transporter activity | 4.45E-05 |
| 9 | GO:0015294: solute:cation symporter activity | 4.45E-05 |
| 10 | GO:0047216: inositol 3-alpha-galactosyltransferase activity | 1.10E-04 |
| 11 | GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity | 1.10E-04 |
| 12 | GO:0003988: acetyl-CoA C-acyltransferase activity | 1.10E-04 |
| 13 | GO:0003924: GTPase activity | 1.19E-04 |
| 14 | GO:0003863: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity | 1.89E-04 |
| 15 | GO:0016151: nickel cation binding | 1.89E-04 |
| 16 | GO:0005047: signal recognition particle binding | 1.89E-04 |
| 17 | GO:0004165: dodecenoyl-CoA delta-isomerase activity | 2.78E-04 |
| 18 | GO:0004300: enoyl-CoA hydratase activity | 2.78E-04 |
| 19 | GO:0004749: ribose phosphate diphosphokinase activity | 2.78E-04 |
| 20 | GO:0004416: hydroxyacylglutathione hydrolase activity | 2.78E-04 |
| 21 | GO:0015210: uracil transmembrane transporter activity | 3.73E-04 |
| 22 | GO:0005525: GTP binding | 6.73E-04 |
| 23 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 6.94E-04 |
| 24 | GO:0004656: procollagen-proline 4-dioxygenase activity | 6.94E-04 |
| 25 | GO:0008113: peptide-methionine (S)-S-oxide reductase activity | 6.94E-04 |
| 26 | GO:0003950: NAD+ ADP-ribosyltransferase activity | 6.94E-04 |
| 27 | GO:0008121: ubiquinol-cytochrome-c reductase activity | 8.11E-04 |
| 28 | GO:0045309: protein phosphorylated amino acid binding | 1.32E-03 |
| 29 | GO:0019904: protein domain specific binding | 1.61E-03 |
| 30 | GO:0005515: protein binding | 1.71E-03 |
| 31 | GO:0015266: protein channel activity | 1.92E-03 |
| 32 | GO:0004175: endopeptidase activity | 2.09E-03 |
| 33 | GO:0004190: aspartic-type endopeptidase activity | 2.25E-03 |
| 34 | GO:0031418: L-ascorbic acid binding | 2.60E-03 |
| 35 | GO:0005385: zinc ion transmembrane transporter activity | 2.60E-03 |
| 36 | GO:0046982: protein heterodimerization activity | 3.97E-03 |
| 37 | GO:0046873: metal ion transmembrane transporter activity | 4.14E-03 |
| 38 | GO:0001085: RNA polymerase II transcription factor binding | 4.14E-03 |
| 39 | GO:0004197: cysteine-type endopeptidase activity | 4.99E-03 |
| 40 | GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity | 5.68E-03 |
| 41 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 7.39E-03 |
| 42 | GO:0050897: cobalt ion binding | 8.18E-03 |
| 43 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 8.18E-03 |
| 44 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 8.71E-03 |
| 45 | GO:0005198: structural molecule activity | 1.13E-02 |
| 46 | GO:0008234: cysteine-type peptidase activity | 1.38E-02 |
| 47 | GO:0031625: ubiquitin protein ligase binding | 1.38E-02 |
| 48 | GO:0022857: transmembrane transporter activity | 1.58E-02 |
| 49 | GO:0016758: transferase activity, transferring hexosyl groups | 1.90E-02 |
| 50 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 2.12E-02 |
| 51 | GO:0000287: magnesium ion binding | 3.27E-02 |
| 52 | GO:0003682: chromatin binding | 3.45E-02 |
| 53 | GO:0004842: ubiquitin-protein transferase activity | 3.68E-02 |
| 54 | GO:0003677: DNA binding | 3.73E-02 |
| 55 | GO:0043565: sequence-specific DNA binding | 3.95E-02 |
| 56 | GO:0061630: ubiquitin protein ligase activity | 4.01E-02 |
| 57 | GO:0008270: zinc ion binding | 4.30E-02 |
| 58 | GO:0042803: protein homodimerization activity | 4.55E-02 |
| 59 | GO:0004722: protein serine/threonine phosphatase activity | 4.69E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010009: cytoplasmic side of endosome membrane | 0.00E+00 |
| 2 | GO:0019822: P4 peroxisome | 0.00E+00 |
| 3 | GO:0005785: signal recognition particle receptor complex | 0.00E+00 |
| 4 | GO:0009514: glyoxysome | 2.05E-05 |
| 5 | GO:0005777: peroxisome | 4.31E-05 |
| 6 | GO:0030139: endocytic vesicle | 1.89E-04 |
| 7 | GO:0000323: lytic vacuole | 2.78E-04 |
| 8 | GO:0031461: cullin-RING ubiquitin ligase complex | 2.78E-04 |
| 9 | GO:0005783: endoplasmic reticulum | 3.16E-04 |
| 10 | GO:0016363: nuclear matrix | 6.94E-04 |
| 11 | GO:0000794: condensed nuclear chromosome | 8.11E-04 |
| 12 | GO:0031305: integral component of mitochondrial inner membrane | 9.32E-04 |
| 13 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 1.06E-03 |
| 14 | GO:0031901: early endosome membrane | 1.19E-03 |
| 15 | GO:0017119: Golgi transport complex | 1.47E-03 |
| 16 | GO:0016602: CCAAT-binding factor complex | 1.92E-03 |
| 17 | GO:0005750: mitochondrial respiratory chain complex III | 2.09E-03 |
| 18 | GO:0005769: early endosome | 2.42E-03 |
| 19 | GO:0005741: mitochondrial outer membrane | 2.96E-03 |
| 20 | GO:0005773: vacuole | 2.96E-03 |
| 21 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 3.53E-03 |
| 22 | GO:0005829: cytosol | 4.94E-03 |
| 23 | GO:0010319: stromule | 5.68E-03 |
| 24 | GO:0005667: transcription factor complex | 6.64E-03 |
| 25 | GO:0005737: cytoplasm | 6.79E-03 |
| 26 | GO:0000151: ubiquitin ligase complex | 7.39E-03 |
| 27 | GO:0000786: nucleosome | 8.44E-03 |
| 28 | GO:0005819: spindle | 9.27E-03 |
| 29 | GO:0031902: late endosome membrane | 9.83E-03 |
| 30 | GO:0031977: thylakoid lumen | 9.83E-03 |
| 31 | GO:0005635: nuclear envelope | 1.35E-02 |
| 32 | GO:0010287: plastoglobule | 1.86E-02 |
| 33 | GO:0005623: cell | 1.97E-02 |
| 34 | GO:0009524: phragmoplast | 2.01E-02 |
| 35 | GO:0005759: mitochondrial matrix | 2.27E-02 |
| 36 | GO:0005768: endosome | 2.40E-02 |
| 37 | GO:0005794: Golgi apparatus | 2.43E-02 |
| 38 | GO:0005774: vacuolar membrane | 2.44E-02 |
| 39 | GO:0009536: plastid | 3.27E-02 |
| 40 | GO:0005789: endoplasmic reticulum membrane | 4.06E-02 |
| 41 | GO:0009506: plasmodesma | 4.41E-02 |
| 42 | GO:0005730: nucleolus | 4.49E-02 |
| 43 | GO:0005743: mitochondrial inner membrane | 4.85E-02 |