Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G03090

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1905615: positive regulation of developmental vegetative growth0.00E+00
2GO:0010203: response to very low fluence red light stimulus0.00E+00
3GO:0010201: response to continuous far red light stimulus by the high-irradiance response system4.26E-06
4GO:0015936: coenzyme A metabolic process4.26E-06
5GO:1901959: positive regulation of cutin biosynthetic process1.18E-05
6GO:0017006: protein-tetrapyrrole linkage2.19E-05
7GO:1904278: positive regulation of wax biosynthetic process2.19E-05
8GO:0010116: positive regulation of abscisic acid biosynthetic process3.41E-05
9GO:0009584: detection of visible light3.41E-05
10GO:0006355: regulation of transcription, DNA-templated4.72E-05
11GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway4.83E-05
12GO:0080037: negative regulation of cytokinin-activated signaling pathway4.83E-05
13GO:0045723: positive regulation of fatty acid biosynthetic process4.83E-05
14GO:2000762: regulation of phenylpropanoid metabolic process6.40E-05
15GO:1901371: regulation of leaf morphogenesis8.11E-05
16GO:0017148: negative regulation of translation9.94E-05
17GO:1901001: negative regulation of response to salt stress9.94E-05
18GO:0010161: red light signaling pathway1.19E-04
19GO:0006351: transcription, DNA-templated1.39E-04
20GO:0009787: regulation of abscisic acid-activated signaling pathway1.39E-04
21GO:0046685: response to arsenic-containing substance1.83E-04
22GO:0009638: phototropism2.05E-04
23GO:0009887: animal organ morphogenesis3.28E-04
24GO:0009266: response to temperature stimulus3.28E-04
25GO:0006833: water transport3.81E-04
26GO:0008299: isoprenoid biosynthetic process4.35E-04
27GO:0010017: red or far-red light signaling pathway4.91E-04
28GO:0034220: ion transmembrane transport6.08E-04
29GO:0009630: gravitropism7.62E-04
30GO:0016126: sterol biosynthetic process9.24E-04
31GO:0018298: protein-chromophore linkage1.10E-03
32GO:0000160: phosphorelay signal transduction system1.13E-03
33GO:0010218: response to far red light1.17E-03
34GO:0009414: response to water deprivation1.48E-03
35GO:0009640: photomorphogenesis1.51E-03
36GO:0009585: red, far-red light phototransduction1.83E-03
37GO:0009620: response to fungus2.19E-03
38GO:0006810: transport2.21E-03
39GO:0007623: circadian rhythm3.36E-03
40GO:0009739: response to gibberellin3.62E-03
41GO:0016567: protein ubiquitination4.52E-03
42GO:0009860: pollen tube growth4.75E-03
43GO:0007049: cell cycle4.87E-03
44GO:0009651: response to salt stress4.99E-03
45GO:0045892: negative regulation of transcription, DNA-templated5.99E-03
46GO:0009751: response to salicylic acid6.78E-03
47GO:0009873: ethylene-activated signaling pathway8.19E-03
48GO:0009738: abscisic acid-activated signaling pathway1.00E-02
49GO:0051301: cell division1.09E-02
50GO:0045893: positive regulation of transcription, DNA-templated1.13E-02
51GO:0055085: transmembrane transport1.21E-02
52GO:0007275: multicellular organism development2.73E-02
RankGO TermAdjusted P value
1GO:0031516: far-red light photoreceptor activity4.26E-06
2GO:0004420: hydroxymethylglutaryl-CoA reductase (NADPH) activity4.26E-06
3GO:0042282: hydroxymethylglutaryl-CoA reductase activity4.26E-06
4GO:0009883: red or far-red light photoreceptor activity1.18E-05
5GO:0008020: G-protein coupled photoreceptor activity2.19E-05
6GO:0002020: protease binding6.40E-05
7GO:0004673: protein histidine kinase activity2.29E-04
8GO:0000976: transcription regulatory region sequence-specific DNA binding2.77E-04
9GO:0008081: phosphoric diester hydrolase activity3.02E-04
10GO:0000155: phosphorelay sensor kinase activity3.02E-04
11GO:0000156: phosphorelay response regulator activity7.94E-04
12GO:0003700: transcription factor activity, sequence-specific DNA binding8.20E-04
13GO:0015250: water channel activity9.24E-04
14GO:0003677: DNA binding1.07E-03
15GO:0050661: NADP binding1.39E-03
16GO:0035091: phosphatidylinositol binding1.59E-03
17GO:0003729: mRNA binding2.24E-03
18GO:0042802: identical protein binding3.95E-03
19GO:0042803: protein homodimerization activity6.12E-03
20GO:0004871: signal transducer activity6.12E-03
21GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding6.38E-03
22GO:0043565: sequence-specific DNA binding7.59E-03
23GO:0008289: lipid binding8.62E-03
24GO:0044212: transcription regulatory region DNA binding1.69E-02
25GO:0005215: transporter activity1.81E-02
26GO:0046983: protein dimerization activity2.07E-02
27GO:0004842: ubiquitin-protein transferase activity2.12E-02
28GO:0004672: protein kinase activity2.22E-02
29GO:0003676: nucleic acid binding4.63E-02
RankGO TermAdjusted P value
1GO:0016604: nuclear body2.05E-04
2GO:0016607: nuclear speck2.10E-03
3GO:0005634: nucleus6.46E-03
4GO:0005773: vacuole7.88E-03
5GO:0005887: integral component of plasma membrane8.48E-03
6GO:0031225: anchored component of membrane1.40E-02
7GO:0016020: membrane1.90E-02
8GO:0009536: plastid1.95E-02
9GO:0009506: plasmodesma1.98E-02
10GO:0005789: endoplasmic reticulum membrane2.28E-02
11GO:0048046: apoplast4.24E-02
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Gene type



Gene DE type