co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G02820

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1901918: negative regulation of exoribonuclease activity	0.00E+00
2	GO:0061635: regulation of protein complex stability	0.00E+00
3	GO:0046471: phosphatidylglycerol metabolic process	0.00E+00
4	GO:0000481: maturation of 5S rRNA	4.31E-05
5	GO:0034337: RNA folding	4.31E-05
6	GO:0006636: unsaturated fatty acid biosynthetic process	8.92E-05
7	GO:0010275: NAD(P)H dehydrogenase complex assembly	1.07E-04
8	GO:0034755: iron ion transmembrane transport	1.07E-04
9	GO:0005977: glycogen metabolic process	1.84E-04
10	GO:0006011: UDP-glucose metabolic process	1.84E-04
11	GO:1902476: chloride transmembrane transport	2.70E-04
12	GO:0015994: chlorophyll metabolic process	3.64E-04
13	GO:0010942: positive regulation of cell death	5.67E-04
14	GO:0010019: chloroplast-nucleus signaling pathway	6.76E-04
15	GO:0006821: chloride transport	7.90E-04
16	GO:0032508: DNA duplex unwinding	9.08E-04
17	GO:0010492: maintenance of shoot apical meristem identity	9.08E-04
18	GO:0052543: callose deposition in cell wall	9.08E-04
19	GO:0009657: plastid organization	1.03E-03
20	GO:0009821: alkaloid biosynthetic process	1.16E-03
21	GO:0009051: pentose-phosphate shunt, oxidative branch	1.16E-03
22	GO:0048507: meristem development	1.16E-03
23	GO:0010205: photoinhibition	1.29E-03
24	GO:0055062: phosphate ion homeostasis	1.43E-03
25	GO:0019684: photosynthesis, light reaction	1.57E-03
26	GO:0009089: lysine biosynthetic process via diaminopimelate	1.57E-03
27	GO:0043085: positive regulation of catalytic activity	1.57E-03
28	GO:0006879: cellular iron ion homeostasis	1.57E-03
29	GO:0009698: phenylpropanoid metabolic process	1.57E-03
30	GO:0009773: photosynthetic electron transport in photosystem I	1.57E-03
31	GO:0015706: nitrate transport	1.72E-03
32	GO:0006006: glucose metabolic process	1.87E-03
33	GO:0009767: photosynthetic electron transport chain	1.87E-03
34	GO:0090351: seedling development	2.19E-03
35	GO:0010167: response to nitrate	2.19E-03
36	GO:0031408: oxylipin biosynthetic process	2.88E-03
37	GO:0030433: ubiquitin-dependent ERAD pathway	3.06E-03
38	GO:0006730: one-carbon metabolic process	3.06E-03
39	GO:0015979: photosynthesis	5.48E-03
40	GO:0042128: nitrate assimilation	6.45E-03
41	GO:0015995: chlorophyll biosynthetic process	6.69E-03
42	GO:0055114: oxidation-reduction process	7.39E-03
43	GO:0009853: photorespiration	8.47E-03
44	GO:0010114: response to red light	1.01E-02
45	GO:0000209: protein polyubiquitination	1.04E-02
46	GO:0006364: rRNA processing	1.25E-02
47	GO:0006857: oligopeptide transport	1.31E-02
48	GO:0006417: regulation of translation	1.34E-02
49	GO:0006396: RNA processing	1.64E-02
50	GO:0009058: biosynthetic process	1.95E-02
51	GO:0006508: proteolysis	1.99E-02
52	GO:0042744: hydrogen peroxide catabolic process	2.06E-02
53	GO:0007623: circadian rhythm	2.36E-02
54	GO:0045944: positive regulation of transcription from RNA polymerase II promoter	3.05E-02
55	GO:0042254: ribosome biogenesis	3.27E-02
56	GO:0009409: response to cold	3.46E-02
57	GO:0009723: response to ethylene	3.58E-02
58	GO:0006810: transport	3.75E-02
59	GO:0080167: response to karrikin	3.76E-02
60	GO:0006412: translation	3.84E-02
61	GO:0010200: response to chitin	3.85E-02
62	GO:0046686: response to cadmium ion	3.97E-02
63	GO:0006629: lipid metabolic process	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity	0.00E+00
2	GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity	0.00E+00
3	GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity	0.00E+00
4	GO:0046906: tetrapyrrole binding	4.31E-05
5	GO:0009671: nitrate:proton symporter activity	4.31E-05
6	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	5.75E-05
7	GO:0005528: FK506 binding	1.00E-04
8	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	1.07E-04
9	GO:0047746: chlorophyllase activity	1.07E-04
10	GO:0004326: tetrahydrofolylpolyglutamate synthase activity	1.07E-04
11	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	1.07E-04
12	GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity	1.84E-04
13	GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity	3.64E-04
14	GO:0005253: anion channel activity	3.64E-04
15	GO:0004345: glucose-6-phosphate dehydrogenase activity	3.64E-04
16	GO:0008374: O-acyltransferase activity	4.63E-04
17	GO:0016787: hydrolase activity	5.64E-04
18	GO:0005247: voltage-gated chloride channel activity	5.67E-04
19	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	6.76E-04
20	GO:0019899: enzyme binding	7.90E-04
21	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	1.03E-03
22	GO:0016844: strictosidine synthase activity	1.29E-03
23	GO:0015112: nitrate transmembrane transporter activity	1.29E-03
24	GO:0005381: iron ion transmembrane transporter activity	1.29E-03
25	GO:0019843: rRNA binding	1.84E-03
26	GO:0003727: single-stranded RNA binding	3.43E-03
27	GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding	6.94E-03
28	GO:0004222: metalloendopeptidase activity	7.69E-03
29	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	7.95E-03
30	GO:0000987: core promoter proximal region sequence-specific DNA binding	8.74E-03
31	GO:0050661: NADP binding	9.28E-03
32	GO:0004185: serine-type carboxypeptidase activity	1.01E-02
33	GO:0043621: protein self-association	1.07E-02
34	GO:0015293: symporter activity	1.10E-02
35	GO:0031625: ubiquitin protein ligase binding	1.34E-02
36	GO:0016874: ligase activity	1.54E-02
37	GO:0004252: serine-type endopeptidase activity	2.02E-02
38	GO:0005509: calcium ion binding	2.36E-02
39	GO:0005215: transporter activity	2.83E-02
40	GO:0004601: peroxidase activity	3.22E-02
41	GO:0016788: hydrolase activity, acting on ester bonds	3.27E-02
42	GO:0050660: flavin adenine dinucleotide binding	3.58E-02
43	GO:0061630: ubiquitin protein ligase activity	3.89E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	1.32E-15
2	GO:0009543: chloroplast thylakoid lumen	2.02E-07
3	GO:0031969: chloroplast membrane	2.68E-06
4	GO:0009534: chloroplast thylakoid	3.00E-06
5	GO:0009570: chloroplast stroma	5.81E-06
6	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	2.46E-05
7	GO:0009344: nitrite reductase complex [NAD(P)H]	4.31E-05
8	GO:0009654: photosystem II oxygen evolving complex	1.12E-04
9	GO:0019898: extrinsic component of membrane	2.46E-04
10	GO:0009579: thylakoid	3.87E-04
11	GO:0034707: chloride channel complex	5.67E-04
12	GO:0009535: chloroplast thylakoid membrane	6.09E-04
13	GO:0005763: mitochondrial small ribosomal subunit	1.16E-03
14	GO:0032040: small-subunit processome	1.72E-03
15	GO:0019013: viral nucleocapsid	1.87E-03
16	GO:0000312: plastid small ribosomal subunit	2.03E-03
17	GO:0030095: chloroplast photosystem II	2.03E-03
18	GO:0009941: chloroplast envelope	2.22E-03
19	GO:0009522: photosystem I	4.23E-03
20	GO:0031977: thylakoid lumen	9.56E-03
21	GO:0009706: chloroplast inner membrane	1.60E-02
22	GO:0005759: mitochondrial matrix	2.21E-02
23	GO:0009705: plant-type vacuole membrane	2.36E-02
24	GO:0005840: ribosome	2.68E-02
25	GO:0005773: vacuole	3.93E-02