GO Enrichment Analysis of Co-expressed Genes with
AT1G02720
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0018160: peptidyl-pyrromethane cofactor linkage | 0.00E+00 |
| 2 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 3 | GO:0097164: ammonium ion metabolic process | 0.00E+00 |
| 4 | GO:0032544: plastid translation | 5.65E-06 |
| 5 | GO:0042371: vitamin K biosynthetic process | 1.97E-05 |
| 6 | GO:0070981: L-asparagine biosynthetic process | 5.10E-05 |
| 7 | GO:0006529: asparagine biosynthetic process | 5.10E-05 |
| 8 | GO:0006518: peptide metabolic process | 9.05E-05 |
| 9 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 9.05E-05 |
| 10 | GO:0006241: CTP biosynthetic process | 1.36E-04 |
| 11 | GO:0006165: nucleoside diphosphate phosphorylation | 1.36E-04 |
| 12 | GO:0006228: UTP biosynthetic process | 1.36E-04 |
| 13 | GO:0015995: chlorophyll biosynthetic process | 1.66E-04 |
| 14 | GO:0071483: cellular response to blue light | 1.86E-04 |
| 15 | GO:0006183: GTP biosynthetic process | 1.86E-04 |
| 16 | GO:0010236: plastoquinone biosynthetic process | 2.40E-04 |
| 17 | GO:0045038: protein import into chloroplast thylakoid membrane | 2.40E-04 |
| 18 | GO:0042372: phylloquinone biosynthetic process | 3.57E-04 |
| 19 | GO:0048280: vesicle fusion with Golgi apparatus | 3.57E-04 |
| 20 | GO:0030488: tRNA methylation | 3.57E-04 |
| 21 | GO:0010019: chloroplast-nucleus signaling pathway | 3.57E-04 |
| 22 | GO:0009955: adaxial/abaxial pattern specification | 3.57E-04 |
| 23 | GO:1901259: chloroplast rRNA processing | 3.57E-04 |
| 24 | GO:0009772: photosynthetic electron transport in photosystem II | 4.19E-04 |
| 25 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 4.19E-04 |
| 26 | GO:0071482: cellular response to light stimulus | 5.50E-04 |
| 27 | GO:0006783: heme biosynthetic process | 6.19E-04 |
| 28 | GO:0006779: porphyrin-containing compound biosynthetic process | 6.90E-04 |
| 29 | GO:0006535: cysteine biosynthetic process from serine | 7.62E-04 |
| 30 | GO:0006896: Golgi to vacuole transport | 7.62E-04 |
| 31 | GO:0006782: protoporphyrinogen IX biosynthetic process | 7.62E-04 |
| 32 | GO:0006352: DNA-templated transcription, initiation | 8.37E-04 |
| 33 | GO:0006541: glutamine metabolic process | 1.07E-03 |
| 34 | GO:0090351: seedling development | 1.15E-03 |
| 35 | GO:0019344: cysteine biosynthetic process | 1.32E-03 |
| 36 | GO:0009411: response to UV | 1.68E-03 |
| 37 | GO:0042147: retrograde transport, endosome to Golgi | 1.88E-03 |
| 38 | GO:0009741: response to brassinosteroid | 2.08E-03 |
| 39 | GO:0009646: response to absence of light | 2.18E-03 |
| 40 | GO:0006623: protein targeting to vacuole | 2.29E-03 |
| 41 | GO:0006891: intra-Golgi vesicle-mediated transport | 2.40E-03 |
| 42 | GO:0007264: small GTPase mediated signal transduction | 2.50E-03 |
| 43 | GO:0009567: double fertilization forming a zygote and endosperm | 2.73E-03 |
| 44 | GO:0000910: cytokinesis | 2.95E-03 |
| 45 | GO:0006888: ER to Golgi vesicle-mediated transport | 3.43E-03 |
| 46 | GO:0009734: auxin-activated signaling pathway | 3.74E-03 |
| 47 | GO:0042542: response to hydrogen peroxide | 4.99E-03 |
| 48 | GO:0045893: positive regulation of transcription, DNA-templated | 5.39E-03 |
| 49 | GO:0042538: hyperosmotic salinity response | 6.00E-03 |
| 50 | GO:0009585: red, far-red light phototransduction | 6.31E-03 |
| 51 | GO:0006096: glycolytic process | 7.08E-03 |
| 52 | GO:0042742: defense response to bacterium | 9.51E-03 |
| 53 | GO:0006412: translation | 1.10E-02 |
| 54 | GO:0046686: response to cadmium ion | 1.49E-02 |
| 55 | GO:0009860: pollen tube growth | 1.70E-02 |
| 56 | GO:0009735: response to cytokinin | 3.49E-02 |
| 57 | GO:0009738: abscisic acid-activated signaling pathway | 3.64E-02 |
| 58 | GO:0006457: protein folding | 4.48E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004418: hydroxymethylbilane synthase activity | 0.00E+00 |
| 2 | GO:0005048: signal sequence binding | 0.00E+00 |
| 3 | GO:0000979: RNA polymerase II core promoter sequence-specific DNA binding | 0.00E+00 |
| 4 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 5 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 1.97E-05 |
| 6 | GO:0004071: aspartate-ammonia ligase activity | 1.97E-05 |
| 7 | GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity | 5.10E-05 |
| 8 | GO:0004148: dihydrolipoyl dehydrogenase activity | 9.05E-05 |
| 9 | GO:0004550: nucleoside diphosphate kinase activity | 1.36E-04 |
| 10 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 1.36E-04 |
| 11 | GO:0016851: magnesium chelatase activity | 1.36E-04 |
| 12 | GO:0004659: prenyltransferase activity | 1.86E-04 |
| 13 | GO:0001053: plastid sigma factor activity | 1.86E-04 |
| 14 | GO:0016987: sigma factor activity | 1.86E-04 |
| 15 | GO:0004040: amidase activity | 2.40E-04 |
| 16 | GO:0004124: cysteine synthase activity | 3.57E-04 |
| 17 | GO:0008312: 7S RNA binding | 4.84E-04 |
| 18 | GO:0051536: iron-sulfur cluster binding | 1.32E-03 |
| 19 | GO:0010181: FMN binding | 2.18E-03 |
| 20 | GO:0003924: GTPase activity | 2.67E-03 |
| 21 | GO:0004222: metalloendopeptidase activity | 3.93E-03 |
| 22 | GO:0000149: SNARE binding | 4.58E-03 |
| 23 | GO:0005484: SNAP receptor activity | 5.13E-03 |
| 24 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 5.71E-03 |
| 25 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 6.31E-03 |
| 26 | GO:0005525: GTP binding | 7.72E-03 |
| 27 | GO:0019843: rRNA binding | 9.42E-03 |
| 28 | GO:0030170: pyridoxal phosphate binding | 1.01E-02 |
| 29 | GO:0008565: protein transporter activity | 1.07E-02 |
| 30 | GO:0016491: oxidoreductase activity | 1.25E-02 |
| 31 | GO:0003735: structural constituent of ribosome | 1.90E-02 |
| 32 | GO:0042803: protein homodimerization activity | 2.20E-02 |
| 33 | GO:0016887: ATPase activity | 3.38E-02 |
| 34 | GO:0016740: transferase activity | 4.29E-02 |
| 35 | GO:0005507: copper ion binding | 4.79E-02 |
| 36 | GO:0005516: calmodulin binding | 4.98E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009570: chloroplast stroma | 6.96E-12 |
| 2 | GO:0009507: chloroplast | 2.58E-11 |
| 3 | GO:0009941: chloroplast envelope | 1.63E-08 |
| 4 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 1.97E-05 |
| 5 | GO:0080085: signal recognition particle, chloroplast targeting | 5.10E-05 |
| 6 | GO:0009509: chromoplast | 9.05E-05 |
| 7 | GO:0012507: ER to Golgi transport vesicle membrane | 4.84E-04 |
| 8 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 5.50E-04 |
| 9 | GO:0005763: mitochondrial small ribosomal subunit | 6.19E-04 |
| 10 | GO:0009579: thylakoid | 7.16E-04 |
| 11 | GO:0009536: plastid | 1.77E-03 |
| 12 | GO:0031969: chloroplast membrane | 1.82E-03 |
| 13 | GO:0009504: cell plate | 2.29E-03 |
| 14 | GO:0009707: chloroplast outer membrane | 3.68E-03 |
| 15 | GO:0005819: spindle | 4.58E-03 |
| 16 | GO:0031902: late endosome membrane | 4.86E-03 |
| 17 | GO:0031201: SNARE complex | 4.86E-03 |
| 18 | GO:0048046: apoplast | 6.98E-03 |
| 19 | GO:0005802: trans-Golgi network | 7.52E-03 |
| 20 | GO:0005768: endosome | 8.55E-03 |
| 21 | GO:0009543: chloroplast thylakoid lumen | 9.42E-03 |
| 22 | GO:0009524: phragmoplast | 9.78E-03 |
| 23 | GO:0005840: ribosome | 9.97E-03 |
| 24 | GO:0009535: chloroplast thylakoid membrane | 2.14E-02 |
| 25 | GO:0022626: cytosolic ribosome | 3.61E-02 |
| 26 | GO:0009534: chloroplast thylakoid | 4.26E-02 |