GO Enrichment Analysis of Co-expressed Genes with
AT1G02280
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0018160: peptidyl-pyrromethane cofactor linkage | 0.00E+00 |
| 2 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
| 3 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 4 | GO:0090071: negative regulation of ribosome biogenesis | 0.00E+00 |
| 5 | GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 6 | GO:0042407: cristae formation | 0.00E+00 |
| 7 | GO:0097164: ammonium ion metabolic process | 0.00E+00 |
| 8 | GO:0015882: L-ascorbic acid transport | 0.00E+00 |
| 9 | GO:0006223: uracil salvage | 0.00E+00 |
| 10 | GO:0000455: enzyme-directed rRNA pseudouridine synthesis | 0.00E+00 |
| 11 | GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 12 | GO:0015995: chlorophyll biosynthetic process | 1.50E-07 |
| 13 | GO:0032544: plastid translation | 1.24E-06 |
| 14 | GO:0006782: protoporphyrinogen IX biosynthetic process | 3.23E-06 |
| 15 | GO:0051085: chaperone mediated protein folding requiring cofactor | 6.65E-06 |
| 16 | GO:0009657: plastid organization | 9.69E-05 |
| 17 | GO:0006783: heme biosynthetic process | 1.20E-04 |
| 18 | GO:0042371: vitamin K biosynthetic process | 1.22E-04 |
| 19 | GO:0006436: tryptophanyl-tRNA aminoacylation | 1.22E-04 |
| 20 | GO:0010028: xanthophyll cycle | 1.22E-04 |
| 21 | GO:0006779: porphyrin-containing compound biosynthetic process | 1.44E-04 |
| 22 | GO:0006529: asparagine biosynthetic process | 2.82E-04 |
| 23 | GO:0008616: queuosine biosynthetic process | 2.82E-04 |
| 24 | GO:0006568: tryptophan metabolic process | 2.82E-04 |
| 25 | GO:2000123: positive regulation of stomatal complex development | 2.82E-04 |
| 26 | GO:0006423: cysteinyl-tRNA aminoacylation | 2.82E-04 |
| 27 | GO:0070981: L-asparagine biosynthetic process | 2.82E-04 |
| 28 | GO:0009735: response to cytokinin | 4.21E-04 |
| 29 | GO:0006418: tRNA aminoacylation for protein translation | 4.61E-04 |
| 30 | GO:0006760: folic acid-containing compound metabolic process | 4.65E-04 |
| 31 | GO:0051604: protein maturation | 4.65E-04 |
| 32 | GO:0006986: response to unfolded protein | 6.66E-04 |
| 33 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 6.66E-04 |
| 34 | GO:0006241: CTP biosynthetic process | 6.66E-04 |
| 35 | GO:0006165: nucleoside diphosphate phosphorylation | 6.66E-04 |
| 36 | GO:0006228: UTP biosynthetic process | 6.66E-04 |
| 37 | GO:0006457: protein folding | 7.82E-04 |
| 38 | GO:0006662: glycerol ether metabolic process | 8.17E-04 |
| 39 | GO:0006183: GTP biosynthetic process | 8.84E-04 |
| 40 | GO:0006221: pyrimidine nucleotide biosynthetic process | 8.84E-04 |
| 41 | GO:0044206: UMP salvage | 8.84E-04 |
| 42 | GO:2000038: regulation of stomatal complex development | 8.84E-04 |
| 43 | GO:0046656: folic acid biosynthetic process | 8.84E-04 |
| 44 | GO:0044205: 'de novo' UMP biosynthetic process | 8.84E-04 |
| 45 | GO:0010375: stomatal complex patterning | 1.12E-03 |
| 46 | GO:0043097: pyrimidine nucleoside salvage | 1.12E-03 |
| 47 | GO:0010236: plastoquinone biosynthetic process | 1.12E-03 |
| 48 | GO:0006633: fatty acid biosynthetic process | 1.30E-03 |
| 49 | GO:0006206: pyrimidine nucleobase metabolic process | 1.37E-03 |
| 50 | GO:0006655: phosphatidylglycerol biosynthetic process | 1.37E-03 |
| 51 | GO:0006796: phosphate-containing compound metabolic process | 1.37E-03 |
| 52 | GO:0042793: transcription from plastid promoter | 1.37E-03 |
| 53 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 1.37E-03 |
| 54 | GO:0042026: protein refolding | 1.64E-03 |
| 55 | GO:1901259: chloroplast rRNA processing | 1.64E-03 |
| 56 | GO:0042372: phylloquinone biosynthetic process | 1.64E-03 |
| 57 | GO:0017148: negative regulation of translation | 1.64E-03 |
| 58 | GO:0046654: tetrahydrofolate biosynthetic process | 1.64E-03 |
| 59 | GO:0009772: photosynthetic electron transport in photosystem II | 1.92E-03 |
| 60 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 1.92E-03 |
| 61 | GO:0052543: callose deposition in cell wall | 2.22E-03 |
| 62 | GO:0006353: DNA-templated transcription, termination | 2.22E-03 |
| 63 | GO:0006875: cellular metal ion homeostasis | 2.22E-03 |
| 64 | GO:0034599: cellular response to oxidative stress | 2.43E-03 |
| 65 | GO:0098656: anion transmembrane transport | 2.87E-03 |
| 66 | GO:0043067: regulation of programmed cell death | 3.21E-03 |
| 67 | GO:1900865: chloroplast RNA modification | 3.21E-03 |
| 68 | GO:0031425: chloroplast RNA processing | 3.21E-03 |
| 69 | GO:0009089: lysine biosynthetic process via diaminopimelate | 3.94E-03 |
| 70 | GO:0043085: positive regulation of catalytic activity | 3.94E-03 |
| 71 | GO:0045454: cell redox homeostasis | 4.17E-03 |
| 72 | GO:0016024: CDP-diacylglycerol biosynthetic process | 4.32E-03 |
| 73 | GO:0045037: protein import into chloroplast stroma | 4.32E-03 |
| 74 | GO:0006541: glutamine metabolic process | 5.12E-03 |
| 75 | GO:0010020: chloroplast fission | 5.12E-03 |
| 76 | GO:0009116: nucleoside metabolic process | 6.42E-03 |
| 77 | GO:0042742: defense response to bacterium | 7.01E-03 |
| 78 | GO:0007005: mitochondrion organization | 7.81E-03 |
| 79 | GO:0009411: response to UV | 8.30E-03 |
| 80 | GO:0009790: embryo development | 8.33E-03 |
| 81 | GO:0006413: translational initiation | 9.19E-03 |
| 82 | GO:0009451: RNA modification | 1.01E-02 |
| 83 | GO:0010197: polar nucleus fusion | 1.04E-02 |
| 84 | GO:0009741: response to brassinosteroid | 1.04E-02 |
| 85 | GO:0009646: response to absence of light | 1.09E-02 |
| 86 | GO:0008654: phospholipid biosynthetic process | 1.15E-02 |
| 87 | GO:0032502: developmental process | 1.26E-02 |
| 88 | GO:1901657: glycosyl compound metabolic process | 1.32E-02 |
| 89 | GO:0007267: cell-cell signaling | 1.44E-02 |
| 90 | GO:0010027: thylakoid membrane organization | 1.56E-02 |
| 91 | GO:0009627: systemic acquired resistance | 1.69E-02 |
| 92 | GO:0008219: cell death | 1.88E-02 |
| 93 | GO:0048481: plant ovule development | 1.88E-02 |
| 94 | GO:0015979: photosynthesis | 2.17E-02 |
| 95 | GO:0009793: embryo development ending in seed dormancy | 2.47E-02 |
| 96 | GO:0042542: response to hydrogen peroxide | 2.59E-02 |
| 97 | GO:0008152: metabolic process | 3.09E-02 |
| 98 | GO:0042538: hyperosmotic salinity response | 3.14E-02 |
| 99 | GO:0009585: red, far-red light phototransduction | 3.30E-02 |
| 100 | GO:0006096: glycolytic process | 3.72E-02 |
| 101 | GO:0009624: response to nematode | 4.24E-02 |
| 102 | GO:0051726: regulation of cell cycle | 4.42E-02 |
| 103 | GO:0009742: brassinosteroid mediated signaling pathway | 4.42E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 2 | GO:0004151: dihydroorotase activity | 0.00E+00 |
| 3 | GO:0004418: hydroxymethylbilane synthase activity | 0.00E+00 |
| 4 | GO:0015229: L-ascorbic acid transporter activity | 0.00E+00 |
| 5 | GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity | 0.00E+00 |
| 6 | GO:0016851: magnesium chelatase activity | 6.65E-06 |
| 7 | GO:0051087: chaperone binding | 1.77E-05 |
| 8 | GO:0051082: unfolded protein binding | 7.55E-05 |
| 9 | GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity | 1.22E-04 |
| 10 | GO:0030794: (S)-coclaurine-N-methyltransferase activity | 1.22E-04 |
| 11 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 1.22E-04 |
| 12 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 1.22E-04 |
| 13 | GO:0004071: aspartate-ammonia ligase activity | 1.22E-04 |
| 14 | GO:0004853: uroporphyrinogen decarboxylase activity | 1.22E-04 |
| 15 | GO:0009374: biotin binding | 1.22E-04 |
| 16 | GO:0015088: copper uptake transmembrane transporter activity | 1.22E-04 |
| 17 | GO:0004830: tryptophan-tRNA ligase activity | 1.22E-04 |
| 18 | GO:0102083: 7,8-dihydromonapterin aldolase activity | 2.82E-04 |
| 19 | GO:0004312: fatty acid synthase activity | 2.82E-04 |
| 20 | GO:0004817: cysteine-tRNA ligase activity | 2.82E-04 |
| 21 | GO:0008479: queuine tRNA-ribosyltransferase activity | 2.82E-04 |
| 22 | GO:0000774: adenyl-nucleotide exchange factor activity | 2.82E-04 |
| 23 | GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity | 2.82E-04 |
| 24 | GO:0004150: dihydroneopterin aldolase activity | 2.82E-04 |
| 25 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 2.82E-04 |
| 26 | GO:0070402: NADPH binding | 4.65E-04 |
| 27 | GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity | 4.65E-04 |
| 28 | GO:0043023: ribosomal large subunit binding | 6.66E-04 |
| 29 | GO:0001872: (1->3)-beta-D-glucan binding | 6.66E-04 |
| 30 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 6.66E-04 |
| 31 | GO:0004550: nucleoside diphosphate kinase activity | 6.66E-04 |
| 32 | GO:0047134: protein-disulfide reductase activity | 7.05E-04 |
| 33 | GO:0004812: aminoacyl-tRNA ligase activity | 7.05E-04 |
| 34 | GO:0042803: protein homodimerization activity | 7.94E-04 |
| 35 | GO:0004791: thioredoxin-disulfide reductase activity | 8.75E-04 |
| 36 | GO:0004659: prenyltransferase activity | 8.84E-04 |
| 37 | GO:0004845: uracil phosphoribosyltransferase activity | 8.84E-04 |
| 38 | GO:0003989: acetyl-CoA carboxylase activity | 1.12E-03 |
| 39 | GO:0004040: amidase activity | 1.12E-03 |
| 40 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.13E-03 |
| 41 | GO:0004605: phosphatidate cytidylyltransferase activity | 1.37E-03 |
| 42 | GO:0016462: pyrophosphatase activity | 1.37E-03 |
| 43 | GO:0004849: uridine kinase activity | 1.64E-03 |
| 44 | GO:0004427: inorganic diphosphatase activity | 1.92E-03 |
| 45 | GO:0003746: translation elongation factor activity | 2.33E-03 |
| 46 | GO:0003723: RNA binding | 2.89E-03 |
| 47 | GO:0005381: iron ion transmembrane transporter activity | 3.21E-03 |
| 48 | GO:0008047: enzyme activator activity | 3.57E-03 |
| 49 | GO:0044183: protein binding involved in protein folding | 3.94E-03 |
| 50 | GO:0005507: copper ion binding | 4.11E-03 |
| 51 | GO:0000049: tRNA binding | 4.32E-03 |
| 52 | GO:0031072: heat shock protein binding | 4.71E-03 |
| 53 | GO:0009982: pseudouridine synthase activity | 4.71E-03 |
| 54 | GO:0005315: inorganic phosphate transmembrane transporter activity | 4.71E-03 |
| 55 | GO:0015035: protein disulfide oxidoreductase activity | 5.87E-03 |
| 56 | GO:0004176: ATP-dependent peptidase activity | 7.34E-03 |
| 57 | GO:0008514: organic anion transmembrane transporter activity | 8.80E-03 |
| 58 | GO:0016887: ATPase activity | 9.49E-03 |
| 59 | GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity | 1.04E-02 |
| 60 | GO:0019901: protein kinase binding | 1.15E-02 |
| 61 | GO:0003743: translation initiation factor activity | 1.15E-02 |
| 62 | GO:0003729: mRNA binding | 1.28E-02 |
| 63 | GO:0008483: transaminase activity | 1.44E-02 |
| 64 | GO:0008237: metallopeptidase activity | 1.44E-02 |
| 65 | GO:0102483: scopolin beta-glucosidase activity | 1.75E-02 |
| 66 | GO:0030247: polysaccharide binding | 1.75E-02 |
| 67 | GO:0008236: serine-type peptidase activity | 1.82E-02 |
| 68 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 2.02E-02 |
| 69 | GO:0008422: beta-glucosidase activity | 2.37E-02 |
| 70 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.98E-02 |
| 71 | GO:0004519: endonuclease activity | 3.05E-02 |
| 72 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 3.80E-02 |
| 73 | GO:0016758: transferase activity, transferring hexosyl groups | 4.88E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 3.94E-49 |
| 2 | GO:0009570: chloroplast stroma | 2.42E-33 |
| 3 | GO:0009941: chloroplast envelope | 3.64E-23 |
| 4 | GO:0009579: thylakoid | 8.59E-13 |
| 5 | GO:0009536: plastid | 1.67E-08 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 2.25E-05 |
| 7 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 1.22E-04 |
| 8 | GO:0005759: mitochondrial matrix | 1.69E-04 |
| 9 | GO:0010007: magnesium chelatase complex | 4.65E-04 |
| 10 | GO:0009317: acetyl-CoA carboxylase complex | 4.65E-04 |
| 11 | GO:0031969: chloroplast membrane | 5.63E-04 |
| 12 | GO:0009706: chloroplast inner membrane | 7.42E-04 |
| 13 | GO:0031897: Tic complex | 8.84E-04 |
| 14 | GO:0009526: plastid envelope | 8.84E-04 |
| 15 | GO:0055035: plastid thylakoid membrane | 1.12E-03 |
| 16 | GO:0009295: nucleoid | 1.27E-03 |
| 17 | GO:0005840: ribosome | 1.85E-03 |
| 18 | GO:0009501: amyloplast | 2.22E-03 |
| 19 | GO:0009539: photosystem II reaction center | 2.54E-03 |
| 20 | GO:0009508: plastid chromosome | 4.71E-03 |
| 21 | GO:0009654: photosystem II oxygen evolving complex | 6.87E-03 |
| 22 | GO:0016592: mediator complex | 1.26E-02 |
| 23 | GO:0010319: stromule | 1.44E-02 |
| 24 | GO:0030529: intracellular ribonucleoprotein complex | 1.56E-02 |
| 25 | GO:0048046: apoplast | 1.61E-02 |
| 26 | GO:0015934: large ribosomal subunit | 2.09E-02 |
| 27 | GO:0005739: mitochondrion | 3.66E-02 |
| 28 | GO:0022626: cytosolic ribosome | 4.74E-02 |
| 29 | GO:0009543: chloroplast thylakoid lumen | 4.97E-02 |