co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G01550

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0000169: activation of MAPK activity involved in osmosensory signaling pathway	0.00E+00
2	GO:2001253: regulation of histone H3-K36 trimethylation	0.00E+00
3	GO:0006987: activation of signaling protein activity involved in unfolded protein response	0.00E+00
4	GO:0010793: regulation of mRNA export from nucleus	0.00E+00
5	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
6	GO:0010200: response to chitin	2.64E-08
7	GO:0006468: protein phosphorylation	6.75E-08
8	GO:0042742: defense response to bacterium	3.51E-07
9	GO:0046777: protein autophosphorylation	6.44E-06
10	GO:0007166: cell surface receptor signaling pathway	1.32E-05
11	GO:0072583: clathrin-dependent endocytosis	1.79E-05
12	GO:0048194: Golgi vesicle budding	1.79E-05
13	GO:0000266: mitochondrial fission	2.02E-05
14	GO:0010102: lateral root morphogenesis	2.52E-05
15	GO:0060548: negative regulation of cell death	3.29E-05
16	GO:0006970: response to osmotic stress	3.67E-05
17	GO:0031348: negative regulation of defense response	8.18E-05
18	GO:0006886: intracellular protein transport	8.93E-05
19	GO:0006952: defense response	1.37E-04
20	GO:0006623: protein targeting to vacuole	1.83E-04
21	GO:0048508: embryonic meristem development	2.13E-04
22	GO:0006805: xenobiotic metabolic process	2.13E-04
23	GO:0000303: response to superoxide	2.13E-04
24	GO:0010941: regulation of cell death	2.13E-04
25	GO:0080136: priming of cellular response to stress	2.13E-04
26	GO:0034214: protein hexamerization	2.13E-04
27	GO:0010120: camalexin biosynthetic process	2.25E-04
28	GO:0050684: regulation of mRNA processing	4.76E-04
29	GO:0006672: ceramide metabolic process	4.76E-04
30	GO:0006212: uracil catabolic process	4.76E-04
31	GO:0007584: response to nutrient	4.76E-04
32	GO:0030010: establishment of cell polarity	4.76E-04
33	GO:0009945: radial axis specification	4.76E-04
34	GO:0043066: negative regulation of apoptotic process	4.76E-04
35	GO:0019483: beta-alanine biosynthetic process	4.76E-04
36	GO:1902000: homogentisate catabolic process	4.76E-04
37	GO:0002221: pattern recognition receptor signaling pathway	4.76E-04
38	GO:0070588: calcium ion transmembrane transport	7.24E-04
39	GO:0009072: aromatic amino acid family metabolic process	7.74E-04
40	GO:0048281: inflorescence morphogenesis	7.74E-04
41	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	7.74E-04
42	GO:0032784: regulation of DNA-templated transcription, elongation	7.74E-04
43	GO:1900140: regulation of seedling development	7.74E-04
44	GO:0010359: regulation of anion channel activity	7.74E-04
45	GO:0061158: 3'-UTR-mediated mRNA destabilization	7.74E-04
46	GO:0009617: response to bacterium	9.03E-04
47	GO:2001289: lipid X metabolic process	1.10E-03
48	GO:0070301: cellular response to hydrogen peroxide	1.10E-03
49	GO:0006809: nitric oxide biosynthetic process	1.10E-03
50	GO:0002679: respiratory burst involved in defense response	1.10E-03
51	GO:2000114: regulation of establishment of cell polarity	1.10E-03
52	GO:0006624: vacuolar protein processing	1.10E-03
53	GO:0010107: potassium ion import	1.47E-03
54	GO:0010508: positive regulation of autophagy	1.47E-03
55	GO:2000038: regulation of stomatal complex development	1.47E-03
56	GO:0080142: regulation of salicylic acid biosynthetic process	1.47E-03
57	GO:0006878: cellular copper ion homeostasis	1.47E-03
58	GO:0042147: retrograde transport, endosome to Golgi	1.49E-03
59	GO:0042631: cellular response to water deprivation	1.61E-03
60	GO:0009626: plant-type hypersensitive response	1.69E-03
61	GO:0030308: negative regulation of cell growth	1.87E-03
62	GO:0009738: abscisic acid-activated signaling pathway	1.87E-03
63	GO:0031365: N-terminal protein amino acid modification	1.87E-03
64	GO:0006891: intra-Golgi vesicle-mediated transport	2.13E-03
65	GO:0035556: intracellular signal transduction	2.18E-03
66	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	2.31E-03
67	GO:1902456: regulation of stomatal opening	2.31E-03
68	GO:1900425: negative regulation of defense response to bacterium	2.31E-03
69	GO:0006751: glutathione catabolic process	2.31E-03
70	GO:2000037: regulation of stomatal complex patterning	2.77E-03
71	GO:2000067: regulation of root morphogenesis	2.77E-03
72	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	2.77E-03
73	GO:0000911: cytokinesis by cell plate formation	2.77E-03
74	GO:0009942: longitudinal axis specification	2.77E-03
75	GO:0048280: vesicle fusion with Golgi apparatus	2.77E-03
76	GO:0010555: response to mannitol	2.77E-03
77	GO:0009790: embryo development	3.19E-03
78	GO:0009816: defense response to bacterium, incompatible interaction	3.25E-03
79	GO:0043090: amino acid import	3.26E-03
80	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	3.26E-03
81	GO:0070370: cellular heat acclimation	3.26E-03
82	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	3.26E-03
83	GO:0009409: response to cold	3.53E-03
84	GO:0048573: photoperiodism, flowering	3.61E-03
85	GO:0016559: peroxisome fission	3.78E-03
86	GO:0009819: drought recovery	3.78E-03
87	GO:0048766: root hair initiation	3.78E-03
88	GO:0006605: protein targeting	3.78E-03
89	GO:0008219: cell death	4.00E-03
90	GO:0006002: fructose 6-phosphate metabolic process	4.33E-03
91	GO:0009880: embryonic pattern specification	4.33E-03
92	GO:0007186: G-protein coupled receptor signaling pathway	4.33E-03
93	GO:0030968: endoplasmic reticulum unfolded protein response	4.33E-03
94	GO:0043562: cellular response to nitrogen levels	4.33E-03
95	GO:0006499: N-terminal protein myristoylation	4.41E-03
96	GO:0006470: protein dephosphorylation	4.68E-03
97	GO:0051865: protein autoubiquitination	4.90E-03
98	GO:0090333: regulation of stomatal closure	4.90E-03
99	GO:0010468: regulation of gene expression	4.94E-03
100	GO:0048268: clathrin coat assembly	5.50E-03
101	GO:0042761: very long-chain fatty acid biosynthetic process	5.50E-03
102	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	5.50E-03
103	GO:0008202: steroid metabolic process	5.50E-03
104	GO:0006897: endocytosis	6.02E-03
105	GO:0006896: Golgi to vacuole transport	6.12E-03
106	GO:0019538: protein metabolic process	6.12E-03
107	GO:0010072: primary shoot apical meristem specification	6.77E-03
108	GO:0009750: response to fructose	6.77E-03
109	GO:0030148: sphingolipid biosynthetic process	6.77E-03
110	GO:0012501: programmed cell death	7.44E-03
111	GO:0010105: negative regulation of ethylene-activated signaling pathway	7.44E-03
112	GO:0006807: nitrogen compound metabolic process	8.13E-03
113	GO:2000028: regulation of photoperiodism, flowering	8.13E-03
114	GO:0010229: inflorescence development	8.13E-03
115	GO:0009723: response to ethylene	8.28E-03
116	GO:0009737: response to abscisic acid	8.56E-03
117	GO:0034605: cellular response to heat	8.84E-03
118	GO:0007034: vacuolar transport	8.84E-03
119	GO:0010053: root epidermal cell differentiation	9.58E-03
120	GO:0016192: vesicle-mediated transport	9.64E-03
121	GO:0034976: response to endoplasmic reticulum stress	1.03E-02
122	GO:2000377: regulation of reactive oxygen species metabolic process	1.11E-02
123	GO:0016575: histone deacetylation	1.19E-02
124	GO:0061077: chaperone-mediated protein folding	1.27E-02
125	GO:0018105: peptidyl-serine phosphorylation	1.29E-02
126	GO:0009742: brassinosteroid mediated signaling pathway	1.33E-02
127	GO:0007005: mitochondrion organization	1.36E-02
128	GO:0071215: cellular response to abscisic acid stimulus	1.45E-02
129	GO:0010227: floral organ abscission	1.45E-02
130	GO:0010091: trichome branching	1.53E-02
131	GO:0010118: stomatal movement	1.72E-02
132	GO:0042391: regulation of membrane potential	1.72E-02
133	GO:0010051: xylem and phloem pattern formation	1.72E-02
134	GO:0071472: cellular response to salt stress	1.81E-02
135	GO:0048544: recognition of pollen	1.91E-02
136	GO:0061025: membrane fusion	1.91E-02
137	GO:0010183: pollen tube guidance	2.00E-02
138	GO:0009749: response to glucose	2.00E-02
139	GO:0009873: ethylene-activated signaling pathway	2.05E-02
140	GO:0009651: response to salt stress	2.05E-02
141	GO:0002229: defense response to oomycetes	2.10E-02
142	GO:0010193: response to ozone	2.10E-02
143	GO:0000302: response to reactive oxygen species	2.10E-02
144	GO:0010150: leaf senescence	2.18E-02
145	GO:0007264: small GTPase mediated signal transduction	2.20E-02
146	GO:0016032: viral process	2.20E-02
147	GO:0009414: response to water deprivation	2.23E-02
148	GO:0030163: protein catabolic process	2.31E-02
149	GO:0006979: response to oxidative stress	2.33E-02
150	GO:0071805: potassium ion transmembrane transport	2.52E-02
151	GO:0051607: defense response to virus	2.62E-02
152	GO:0009607: response to biotic stimulus	2.84E-02
153	GO:0006888: ER to Golgi vesicle-mediated transport	3.07E-02
154	GO:0006950: response to stress	3.07E-02
155	GO:0015031: protein transport	3.28E-02
156	GO:0009817: defense response to fungus, incompatible interaction	3.30E-02
157	GO:0048481: plant ovule development	3.30E-02
158	GO:0009407: toxin catabolic process	3.54E-02
159	GO:0048527: lateral root development	3.66E-02
160	GO:0010119: regulation of stomatal movement	3.66E-02
161	GO:0006865: amino acid transport	3.78E-02
162	GO:0009853: photorespiration	3.91E-02
163	GO:0009867: jasmonic acid mediated signaling pathway	3.91E-02
164	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.31E-02
165	GO:0050832: defense response to fungus	4.34E-02
166	GO:0006631: fatty acid metabolic process	4.41E-02
167	GO:0006508: proteolysis	4.58E-02
168	GO:0009744: response to sucrose	4.68E-02

Rank	GO Term	Adjusted P value
1	GO:0003837: beta-ureidopropionase activity	0.00E+00
2	GO:0070577: lysine-acetylated histone binding	0.00E+00
3	GO:0033550: MAP kinase tyrosine phosphatase activity	0.00E+00
4	GO:0016504: peptidase activator activity	0.00E+00
5	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
6	GO:0005524: ATP binding	8.23E-14
7	GO:0016301: kinase activity	9.86E-10
8	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	4.62E-07
9	GO:0004012: phospholipid-translocating ATPase activity	1.36E-06
10	GO:0005516: calmodulin binding	5.12E-05
11	GO:0004672: protein kinase activity	8.40E-05
12	GO:0004674: protein serine/threonine kinase activity	8.65E-05
13	GO:0003950: NAD+ ADP-ribosyltransferase activity	1.08E-04
14	GO:0030276: clathrin binding	1.49E-04
15	GO:0004714: transmembrane receptor protein tyrosine kinase activity	1.82E-04
16	GO:0005515: protein binding	1.89E-04
17	GO:0032050: clathrin heavy chain binding	2.13E-04
18	GO:0015085: calcium ion transmembrane transporter activity	2.13E-04
19	GO:0045140: inositol phosphoceramide synthase activity	4.76E-04
20	GO:0005388: calcium-transporting ATPase activity	5.75E-04
21	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	6.22E-04
22	GO:0004190: aspartic-type endopeptidase activity	7.24E-04
23	GO:0003924: GTPase activity	7.29E-04
24	GO:0005047: signal recognition particle binding	7.74E-04
25	GO:0004557: alpha-galactosidase activity	7.74E-04
26	GO:0031683: G-protein beta/gamma-subunit complex binding	7.74E-04
27	GO:0003840: gamma-glutamyltransferase activity	7.74E-04
28	GO:0036374: glutathione hydrolase activity	7.74E-04
29	GO:0052692: raffinose alpha-galactosidase activity	7.74E-04
30	GO:0001664: G-protein coupled receptor binding	7.74E-04
31	GO:0043424: protein histidine kinase binding	9.78E-04
32	GO:0004707: MAP kinase activity	1.07E-03
33	GO:0033612: receptor serine/threonine kinase binding	1.07E-03
34	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	1.10E-03
35	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	1.10E-03
36	GO:0005525: GTP binding	1.28E-03
37	GO:0000287: magnesium ion binding	1.29E-03
38	GO:0070628: proteasome binding	1.47E-03
39	GO:0016004: phospholipase activator activity	1.47E-03
40	GO:0004301: epoxide hydrolase activity	1.47E-03
41	GO:0043531: ADP binding	1.53E-03
42	GO:0005496: steroid binding	1.87E-03
43	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	1.87E-03
44	GO:0031593: polyubiquitin binding	2.31E-03
45	GO:0102391: decanoate--CoA ligase activity	2.77E-03
46	GO:0008235: metalloexopeptidase activity	3.26E-03
47	GO:0003872: 6-phosphofructokinase activity	3.26E-03
48	GO:0004467: long-chain fatty acid-CoA ligase activity	3.26E-03
49	GO:0008565: protein transporter activity	3.29E-03
50	GO:0009931: calcium-dependent protein serine/threonine kinase activity	3.43E-03
51	GO:0004683: calmodulin-dependent protein kinase activity	3.61E-03
52	GO:0008142: oxysterol binding	4.33E-03
53	GO:0005267: potassium channel activity	4.33E-03
54	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	4.33E-03
55	GO:0005545: 1-phosphatidylinositol binding	6.12E-03
56	GO:0004713: protein tyrosine kinase activity	6.12E-03
57	GO:0004177: aminopeptidase activity	6.77E-03
58	GO:0004521: endoribonuclease activity	7.44E-03
59	GO:0004175: endopeptidase activity	8.84E-03
60	GO:0030553: cGMP binding	9.58E-03
61	GO:0030552: cAMP binding	9.58E-03
62	GO:0004725: protein tyrosine phosphatase activity	1.03E-02
63	GO:0003954: NADH dehydrogenase activity	1.11E-02
64	GO:0004407: histone deacetylase activity	1.11E-02
65	GO:0005528: FK506 binding	1.11E-02
66	GO:0005216: ion channel activity	1.19E-02
67	GO:0015079: potassium ion transmembrane transporter activity	1.19E-02
68	GO:0030246: carbohydrate binding	1.25E-02
69	GO:0004722: protein serine/threonine phosphatase activity	1.28E-02
70	GO:0003756: protein disulfide isomerase activity	1.53E-02
71	GO:0003727: single-stranded RNA binding	1.53E-02
72	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.62E-02
73	GO:0030551: cyclic nucleotide binding	1.72E-02
74	GO:0005249: voltage-gated potassium channel activity	1.72E-02
75	GO:0001085: RNA polymerase II transcription factor binding	1.81E-02
76	GO:0016853: isomerase activity	1.91E-02
77	GO:0005509: calcium ion binding	2.05E-02
78	GO:0004197: cysteine-type endopeptidase activity	2.20E-02
79	GO:0008017: microtubule binding	2.28E-02
80	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.52E-02
81	GO:0016887: ATPase activity	2.58E-02
82	GO:0030247: polysaccharide binding	3.07E-02
83	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	3.66E-02
84	GO:0000149: SNARE binding	4.16E-02
85	GO:0004712: protein serine/threonine/tyrosine kinase activity	4.16E-02
86	GO:0004497: monooxygenase activity	4.17E-02
87	GO:0020037: heme binding	4.48E-02
88	GO:0004364: glutathione transferase activity	4.55E-02
89	GO:0005484: SNAP receptor activity	4.68E-02
90	GO:0019825: oxygen binding	4.71E-02

Rank	GO Term	Adjusted P value
1	GO:0005785: signal recognition particle receptor complex	0.00E+00
2	GO:0005886: plasma membrane	1.24E-13
3	GO:0016021: integral component of membrane	1.07E-05
4	GO:0031902: late endosome membrane	8.23E-05
5	GO:0016363: nuclear matrix	1.08E-04
6	GO:0030131: clathrin adaptor complex	1.82E-04
7	GO:0045334: clathrin-coated endocytic vesicle	2.13E-04
8	GO:0030665: clathrin-coated vesicle membrane	3.26E-04
9	GO:0017119: Golgi transport complex	3.82E-04
10	GO:0030125: clathrin vesicle coat	3.82E-04
11	GO:0031304: intrinsic component of mitochondrial inner membrane	4.76E-04
12	GO:0042406: extrinsic component of endoplasmic reticulum membrane	7.74E-04
13	GO:0030139: endocytic vesicle	7.74E-04
14	GO:0005783: endoplasmic reticulum	8.70E-04
15	GO:0005905: clathrin-coated pit	1.07E-03
16	GO:0000323: lytic vacuole	1.10E-03
17	GO:0005887: integral component of plasma membrane	1.24E-03
18	GO:0005789: endoplasmic reticulum membrane	1.35E-03
19	GO:0005945: 6-phosphofructokinase complex	1.87E-03
20	GO:0000164: protein phosphatase type 1 complex	1.87E-03
21	GO:0030904: retromer complex	2.31E-03
22	GO:0005774: vacuolar membrane	2.82E-03
23	GO:0005773: vacuole	2.91E-03
24	GO:0012507: ER to Golgi transport vesicle membrane	3.78E-03
25	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	4.33E-03
26	GO:0005829: cytosol	4.53E-03
27	GO:0005802: trans-Golgi network	4.54E-03
28	GO:0016604: nuclear body	5.50E-03
29	GO:0005794: Golgi apparatus	5.99E-03
30	GO:0005795: Golgi stack	9.58E-03
31	GO:0045271: respiratory chain complex I	1.19E-02
32	GO:0005839: proteasome core complex	1.27E-02
33	GO:0005741: mitochondrial outer membrane	1.27E-02
34	GO:0030136: clathrin-coated vesicle	1.62E-02
35	GO:0005623: cell	1.62E-02
36	GO:0009524: phragmoplast	1.66E-02
37	GO:0009504: cell plate	2.00E-02
38	GO:0005778: peroxisomal membrane	2.52E-02
39	GO:0030529: intracellular ribonucleoprotein complex	2.73E-02
40	GO:0009506: plasmodesma	2.79E-02
41	GO:0005788: endoplasmic reticulum lumen	2.84E-02
42	GO:0005667: transcription factor complex	2.95E-02
43	GO:0000139: Golgi membrane	3.60E-02
44	GO:0005777: peroxisome	3.62E-02
45	GO:0000786: nucleosome	3.78E-02
46	GO:0005874: microtubule	4.03E-02
47	GO:0031201: SNARE complex	4.41E-02