co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G67600

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042362: fat-soluble vitamin biosynthetic process	0.00E+00
2	GO:0009398: FMN biosynthetic process	0.00E+00
3	GO:1990569: UDP-N-acetylglucosamine transmembrane transport	0.00E+00
4	GO:0015789: UDP-N-acetylgalactosamine transport	0.00E+00
5	GO:0090239: regulation of histone H4 acetylation	0.00E+00
6	GO:0010234: anther wall tapetum cell fate specification	0.00E+00
7	GO:0001881: receptor recycling	0.00E+00
8	GO:1903070: negative regulation of ER-associated ubiquitin-dependent protein catabolic process	0.00E+00
9	GO:1903857: negative regulation of cytokinin dehydrogenase activity	0.00E+00
10	GO:0046487: glyoxylate metabolic process	0.00E+00
11	GO:0006412: translation	4.47E-23
12	GO:0042254: ribosome biogenesis	4.85E-15
13	GO:0006511: ubiquitin-dependent protein catabolic process	1.67E-07
14	GO:0043248: proteasome assembly	1.02E-04
15	GO:0009955: adaxial/abaxial pattern specification	1.41E-04
16	GO:0008283: cell proliferation	1.48E-04
17	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	1.85E-04
18	GO:0032365: intracellular lipid transport	2.53E-04
19	GO:0010365: positive regulation of ethylene biosynthetic process	2.53E-04
20	GO:0051603: proteolysis involved in cellular protein catabolic process	2.61E-04
21	GO:0019483: beta-alanine biosynthetic process	5.59E-04
22	GO:0015786: UDP-glucose transport	5.59E-04
23	GO:0006123: mitochondrial electron transport, cytochrome c to oxygen	5.59E-04
24	GO:0043981: histone H4-K5 acetylation	5.59E-04
25	GO:0009915: phloem sucrose loading	5.59E-04
26	GO:0006212: uracil catabolic process	5.59E-04
27	GO:0051788: response to misfolded protein	5.59E-04
28	GO:0006820: anion transport	6.42E-04
29	GO:0009735: response to cytokinin	6.58E-04
30	GO:0006626: protein targeting to mitochondrion	7.28E-04
31	GO:0046686: response to cadmium ion	7.64E-04
32	GO:0043617: cellular response to sucrose starvation	9.07E-04
33	GO:0002181: cytoplasmic translation	9.07E-04
34	GO:0045793: positive regulation of cell size	9.07E-04
35	GO:0015783: GDP-fucose transport	9.07E-04
36	GO:0009410: response to xenobiotic stimulus	9.07E-04
37	GO:0008333: endosome to lysosome transport	9.07E-04
38	GO:0000027: ribosomal large subunit assembly	1.12E-03
39	GO:0006168: adenine salvage	1.29E-03
40	GO:0001676: long-chain fatty acid metabolic process	1.29E-03
41	GO:0032877: positive regulation of DNA endoreduplication	1.29E-03
42	GO:0046836: glycolipid transport	1.29E-03
43	GO:0009413: response to flooding	1.29E-03
44	GO:0006166: purine ribonucleoside salvage	1.29E-03
45	GO:0072334: UDP-galactose transmembrane transport	1.29E-03
46	GO:0009647: skotomorphogenesis	1.29E-03
47	GO:0009651: response to salt stress	1.70E-03
48	GO:0051781: positive regulation of cell division	1.73E-03
49	GO:0042274: ribosomal small subunit biogenesis	1.73E-03
50	GO:0010363: regulation of plant-type hypersensitive response	1.73E-03
51	GO:0009793: embryo development ending in seed dormancy	1.96E-03
52	GO:0097428: protein maturation by iron-sulfur cluster transfer	2.21E-03
53	GO:0007029: endoplasmic reticulum organization	2.21E-03
54	GO:1902183: regulation of shoot apical meristem development	2.21E-03
55	GO:0044209: AMP salvage	2.21E-03
56	GO:0009556: microsporogenesis	2.54E-03
57	GO:0048831: regulation of shoot system development	2.72E-03
58	GO:0030163: protein catabolic process	3.09E-03
59	GO:0010189: vitamin E biosynthetic process	3.27E-03
60	GO:0009554: megasporogenesis	3.27E-03
61	GO:0009648: photoperiodism	3.27E-03
62	GO:1901001: negative regulation of response to salt stress	3.27E-03
63	GO:0006914: autophagy	3.29E-03
64	GO:0048528: post-embryonic root development	3.86E-03
65	GO:0009690: cytokinin metabolic process	4.48E-03
66	GO:0031540: regulation of anthocyanin biosynthetic process	4.48E-03
67	GO:0009231: riboflavin biosynthetic process	4.48E-03
68	GO:0006102: isocitrate metabolic process	4.48E-03
69	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	4.48E-03
70	GO:0043562: cellular response to nitrogen levels	5.13E-03
71	GO:0006972: hyperosmotic response	5.13E-03
72	GO:0009407: toxin catabolic process	5.63E-03
73	GO:0015780: nucleotide-sugar transport	5.81E-03
74	GO:0098656: anion transmembrane transport	5.81E-03
75	GO:0046685: response to arsenic-containing substance	5.81E-03
76	GO:0009245: lipid A biosynthetic process	5.81E-03
77	GO:0010043: response to zinc ion	5.91E-03
78	GO:0010449: root meristem growth	6.52E-03
79	GO:0030042: actin filament depolymerization	6.52E-03
80	GO:0043069: negative regulation of programmed cell death	7.26E-03
81	GO:0006631: fatty acid metabolic process	7.70E-03
82	GO:0015770: sucrose transport	8.04E-03
83	GO:0072593: reactive oxygen species metabolic process	8.04E-03
84	GO:0048229: gametophyte development	8.04E-03
85	GO:0010015: root morphogenesis	8.04E-03
86	GO:0006913: nucleocytoplasmic transport	8.04E-03
87	GO:0006790: sulfur compound metabolic process	8.83E-03
88	GO:0009636: response to toxic substance	9.39E-03
89	GO:0009965: leaf morphogenesis	9.39E-03
90	GO:0006807: nitrogen compound metabolic process	9.66E-03
91	GO:2000028: regulation of photoperiodism, flowering	9.66E-03
92	GO:0007034: vacuolar transport	1.05E-02
93	GO:0009266: response to temperature stimulus	1.05E-02
94	GO:0006979: response to oxidative stress	1.07E-02
95	GO:0046854: phosphatidylinositol phosphorylation	1.14E-02
96	GO:0010167: response to nitrate	1.14E-02
97	GO:0006636: unsaturated fatty acid biosynthetic process	1.23E-02
98	GO:0006406: mRNA export from nucleus	1.32E-02
99	GO:0006289: nucleotide-excision repair	1.32E-02
100	GO:0006487: protein N-linked glycosylation	1.32E-02
101	GO:0009116: nucleoside metabolic process	1.32E-02
102	GO:0009863: salicylic acid mediated signaling pathway	1.32E-02
103	GO:0030150: protein import into mitochondrial matrix	1.32E-02
104	GO:0015992: proton transport	1.52E-02
105	GO:0051260: protein homooligomerization	1.52E-02
106	GO:0048511: rhythmic process	1.52E-02
107	GO:0010431: seed maturation	1.52E-02
108	GO:0061077: chaperone-mediated protein folding	1.52E-02
109	GO:0007005: mitochondrion organization	1.62E-02
110	GO:0009814: defense response, incompatible interaction	1.62E-02
111	GO:0040007: growth	1.72E-02
112	GO:0019722: calcium-mediated signaling	1.83E-02
113	GO:0010584: pollen exine formation	1.83E-02
114	GO:0006817: phosphate ion transport	1.83E-02
115	GO:0042147: retrograde transport, endosome to Golgi	1.94E-02
116	GO:0010118: stomatal movement	2.05E-02
117	GO:0015991: ATP hydrolysis coupled proton transport	2.05E-02
118	GO:0042631: cellular response to water deprivation	2.05E-02
119	GO:0008360: regulation of cell shape	2.16E-02
120	GO:0009646: response to absence of light	2.27E-02
121	GO:0042744: hydrogen peroxide catabolic process	2.30E-02
122	GO:0048825: cotyledon development	2.39E-02
123	GO:0006623: protein targeting to vacuole	2.39E-02
124	GO:0010183: pollen tube guidance	2.39E-02
125	GO:0010193: response to ozone	2.51E-02
126	GO:0000302: response to reactive oxygen species	2.51E-02
127	GO:0006635: fatty acid beta-oxidation	2.51E-02
128	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	2.51E-02
129	GO:0006413: translational initiation	2.60E-02
130	GO:0055114: oxidation-reduction process	3.06E-02
131	GO:0009739: response to gibberellin	3.12E-02
132	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.12E-02
133	GO:0000910: cytokinesis	3.13E-02
134	GO:0009908: flower development	3.66E-02
135	GO:0016049: cell growth	3.80E-02
136	GO:0006811: ion transport	4.22E-02
137	GO:0006499: N-terminal protein myristoylation	4.22E-02
138	GO:0000724: double-strand break repair via homologous recombination	4.51E-02
139	GO:0006099: tricarboxylic acid cycle	4.80E-02

Rank	GO Term	Adjusted P value
1	GO:0052873: FMN reductase (NADPH) activity	0.00E+00
2	GO:0010176: homogentisate phytyltransferase activity	0.00E+00
3	GO:0008670: 2,4-dienoyl-CoA reductase (NADPH) activity	0.00E+00
4	GO:0008752: FMN reductase activity	0.00E+00
5	GO:0005463: UDP-N-acetylgalactosamine transmembrane transporter activity	0.00E+00
6	GO:0008531: riboflavin kinase activity	0.00E+00
7	GO:0003837: beta-ureidopropionase activity	0.00E+00
8	GO:0003735: structural constituent of ribosome	2.02E-29
9	GO:0004298: threonine-type endopeptidase activity	1.32E-13
10	GO:0008233: peptidase activity	6.23E-08
11	GO:0008097: 5S rRNA binding	2.42E-05
12	GO:0015288: porin activity	2.35E-04
13	GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity	2.53E-04
14	GO:0019786: Atg8-specific protease activity	2.53E-04
15	GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity	2.53E-04
16	GO:0016229: steroid dehydrogenase activity	2.53E-04
17	GO:0000824: inositol tetrakisphosphate 3-kinase activity	2.53E-04
18	GO:0070401: NADP+ binding	2.53E-04
19	GO:0047326: inositol tetrakisphosphate 5-kinase activity	2.53E-04
20	GO:0008308: voltage-gated anion channel activity	2.90E-04
21	GO:0008517: folic acid transporter activity	5.59E-04
22	GO:0004750: ribulose-phosphate 3-epimerase activity	5.59E-04
23	GO:0003919: FMN adenylyltransferase activity	5.59E-04
24	GO:0032934: sterol binding	5.59E-04
25	GO:0019779: Atg8 activating enzyme activity	5.59E-04
26	GO:0019843: rRNA binding	6.16E-04
27	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	9.07E-04
28	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	9.07E-04
29	GO:0005457: GDP-fucose transmembrane transporter activity	9.07E-04
30	GO:0003863: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity	9.07E-04
31	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.29E-03
32	GO:0003999: adenine phosphoribosyltransferase activity	1.29E-03
33	GO:0005460: UDP-glucose transmembrane transporter activity	1.29E-03
34	GO:0017089: glycolipid transporter activity	1.29E-03
35	GO:0004576: oligosaccharyl transferase activity	1.73E-03
36	GO:0019776: Atg8 ligase activity	1.73E-03
37	GO:0016004: phospholipase activator activity	1.73E-03
38	GO:0004659: prenyltransferase activity	1.73E-03
39	GO:0015368: calcium:cation antiporter activity	1.73E-03
40	GO:0010011: auxin binding	1.73E-03
41	GO:0051861: glycolipid binding	1.73E-03
42	GO:0015369: calcium:proton antiporter activity	1.73E-03
43	GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances	1.73E-03
44	GO:0019199: transmembrane receptor protein kinase activity	1.73E-03
45	GO:0070628: proteasome binding	1.73E-03
46	GO:0004601: peroxidase activity	1.94E-03
47	GO:0003729: mRNA binding	2.20E-03
48	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	2.21E-03
49	GO:0005459: UDP-galactose transmembrane transporter activity	2.21E-03
50	GO:0031177: phosphopantetheine binding	2.72E-03
51	GO:0031593: polyubiquitin binding	2.72E-03
52	GO:0000035: acyl binding	3.27E-03
53	GO:0004602: glutathione peroxidase activity	3.27E-03
54	GO:0004656: procollagen-proline 4-dioxygenase activity	3.27E-03
55	GO:0051920: peroxiredoxin activity	3.27E-03
56	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	3.27E-03
57	GO:0102391: decanoate--CoA ligase activity	3.27E-03
58	GO:0043295: glutathione binding	3.86E-03
59	GO:0004467: long-chain fatty acid-CoA ligase activity	3.86E-03
60	GO:0005338: nucleotide-sugar transmembrane transporter activity	3.86E-03
61	GO:0008121: ubiquinol-cytochrome-c reductase activity	3.86E-03
62	GO:0004033: aldo-keto reductase (NADP) activity	4.48E-03
63	GO:0015491: cation:cation antiporter activity	4.48E-03
64	GO:0016209: antioxidant activity	4.48E-03
65	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	4.48E-03
66	GO:0005515: protein binding	5.06E-03
67	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	5.11E-03
68	GO:0000989: transcription factor activity, transcription factor binding	5.81E-03
69	GO:0001055: RNA polymerase II activity	6.52E-03
70	GO:0004364: glutathione transferase activity	8.02E-03
71	GO:0008515: sucrose transmembrane transporter activity	8.04E-03
72	GO:0046961: proton-transporting ATPase activity, rotational mechanism	8.04E-03
73	GO:0008327: methyl-CpG binding	8.04E-03
74	GO:0001054: RNA polymerase I activity	8.04E-03
75	GO:0008559: xenobiotic-transporting ATPase activity	8.04E-03
76	GO:0001056: RNA polymerase III activity	8.83E-03
77	GO:0015266: protein channel activity	9.66E-03
78	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.13E-02
79	GO:0051119: sugar transmembrane transporter activity	1.14E-02
80	GO:0008134: transcription factor binding	1.32E-02
81	GO:0031418: L-ascorbic acid binding	1.32E-02
82	GO:0043130: ubiquitin binding	1.32E-02
83	GO:0005528: FK506 binding	1.32E-02
84	GO:0008514: organic anion transmembrane transporter activity	1.83E-02
85	GO:0010181: FMN binding	2.27E-02
86	GO:0004872: receptor activity	2.39E-02
87	GO:0003684: damaged DNA binding	2.87E-02
88	GO:0000166: nucleotide binding	4.14E-02
89	GO:0000287: magnesium ion binding	4.22E-02
90	GO:0050897: cobalt ion binding	4.36E-02
91	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.66E-02
92	GO:0003746: translation elongation factor activity	4.66E-02

Rank	GO Term	Adjusted P value
1	GO:0022625: cytosolic large ribosomal subunit	1.08E-21
2	GO:0022626: cytosolic ribosome	6.40E-21
3	GO:0005840: ribosome	1.08E-18
4	GO:0000502: proteasome complex	1.44E-17
5	GO:0005829: cytosol	2.80E-14
6	GO:0005839: proteasome core complex	1.32E-13
7	GO:0022627: cytosolic small ribosomal subunit	1.15E-12
8	GO:0005737: cytoplasm	7.64E-10
9	GO:0005774: vacuolar membrane	6.13E-08
10	GO:0019773: proteasome core complex, alpha-subunit complex	8.05E-08
11	GO:0015934: large ribosomal subunit	1.65E-07
12	GO:0005773: vacuole	1.00E-06
13	GO:0005730: nucleolus	1.33E-05
14	GO:0009506: plasmodesma	5.14E-05
15	GO:0005886: plasma membrane	1.61E-04
16	GO:0000421: autophagosome membrane	2.35E-04
17	GO:0046930: pore complex	2.90E-04
18	GO:0008541: proteasome regulatory particle, lid subcomplex	5.62E-04
19	GO:0005665: DNA-directed RNA polymerase II, core complex	6.42E-04
20	GO:0046861: glyoxysomal membrane	9.07E-04
21	GO:0005758: mitochondrial intermembrane space	1.12E-03
22	GO:0070469: respiratory chain	1.23E-03
23	GO:0033180: proton-transporting V-type ATPase, V1 domain	1.29E-03
24	GO:1990726: Lsm1-7-Pat1 complex	1.29E-03
25	GO:0005775: vacuolar lumen	1.29E-03
26	GO:0005741: mitochondrial outer membrane	1.35E-03
27	GO:0031410: cytoplasmic vesicle	1.48E-03
28	GO:0005776: autophagosome	1.73E-03
29	GO:0016471: vacuolar proton-transporting V-type ATPase complex	1.73E-03
30	GO:0008250: oligosaccharyltransferase complex	2.21E-03
31	GO:0005771: multivesicular body	2.72E-03
32	GO:0030904: retromer complex	2.72E-03
33	GO:0005788: endoplasmic reticulum lumen	4.15E-03
34	GO:0005688: U6 snRNP	4.48E-03
35	GO:0009514: glyoxysome	5.13E-03
36	GO:0046540: U4/U6 x U5 tri-snRNP complex	5.13E-03
37	GO:0005742: mitochondrial outer membrane translocase complex	5.13E-03
38	GO:0005736: DNA-directed RNA polymerase I complex	5.81E-03
39	GO:0005666: DNA-directed RNA polymerase III complex	6.52E-03
40	GO:0071011: precatalytic spliceosome	6.52E-03
41	GO:0005618: cell wall	6.99E-03
42	GO:0000418: DNA-directed RNA polymerase IV complex	7.26E-03
43	GO:0071013: catalytic step 2 spliceosome	8.04E-03
44	GO:0016020: membrane	8.35E-03
45	GO:0005750: mitochondrial respiratory chain complex III	1.05E-02
46	GO:0005783: endoplasmic reticulum	1.09E-02
47	GO:0000419: DNA-directed RNA polymerase V complex	1.23E-02
48	GO:0005769: early endosome	1.23E-02
49	GO:0009507: chloroplast	1.36E-02
50	GO:0015935: small ribosomal subunit	1.52E-02
51	GO:0015629: actin cytoskeleton	1.72E-02
52	GO:0005759: mitochondrial matrix	2.54E-02
53	GO:0009705: plant-type vacuole membrane	2.79E-02
54	GO:0000932: P-body	3.26E-02
55	GO:0009707: chloroplast outer membrane	3.93E-02
56	GO:0000325: plant-type vacuole	4.36E-02
57	GO:0000786: nucleosome	4.51E-02
58	GO:0005777: peroxisome	4.89E-02