co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G67590

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046487: glyoxylate metabolic process	0.00E+00
2	GO:0015746: citrate transport	0.00E+00
3	GO:0007530: sex determination	0.00E+00
4	GO:1990569: UDP-N-acetylglucosamine transmembrane transport	0.00E+00
5	GO:0015789: UDP-N-acetylgalactosamine transport	0.00E+00
6	GO:0033539: fatty acid beta-oxidation using acyl-CoA dehydrogenase	0.00E+00
7	GO:0001881: receptor recycling	0.00E+00
8	GO:0006592: ornithine biosynthetic process	0.00E+00
9	GO:1903070: negative regulation of ER-associated ubiquitin-dependent protein catabolic process	0.00E+00
10	GO:1903857: negative regulation of cytokinin dehydrogenase activity	0.00E+00
11	GO:0032211: negative regulation of telomere maintenance via telomerase	0.00E+00
12	GO:0006412: translation	1.05E-17
13	GO:0006511: ubiquitin-dependent protein catabolic process	3.56E-17
14	GO:0042254: ribosome biogenesis	6.17E-11
15	GO:0051603: proteolysis involved in cellular protein catabolic process	1.61E-08
16	GO:0000027: ribosomal large subunit assembly	6.73E-06
17	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	8.00E-06
18	GO:0000028: ribosomal small subunit assembly	1.20E-05
19	GO:1902626: assembly of large subunit precursor of preribosome	1.99E-05
20	GO:0008333: endosome to lysosome transport	1.99E-05
21	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	8.78E-05
22	GO:0097428: protein maturation by iron-sulfur cluster transfer	1.22E-04
23	GO:0043248: proteasome assembly	1.76E-04
24	GO:0009852: auxin catabolic process	3.55E-04
25	GO:0032365: intracellular lipid transport	3.55E-04
26	GO:0031468: nuclear envelope reassembly	3.55E-04
27	GO:0010265: SCF complex assembly	3.55E-04
28	GO:2001006: regulation of cellulose biosynthetic process	3.55E-04
29	GO:0015986: ATP synthesis coupled proton transport	4.47E-04
30	GO:0009245: lipid A biosynthetic process	5.70E-04
31	GO:0009060: aerobic respiration	5.70E-04
32	GO:0098656: anion transmembrane transport	5.70E-04
33	GO:0006452: translational frameshifting	7.72E-04
34	GO:0051788: response to misfolded protein	7.72E-04
35	GO:0006432: phenylalanyl-tRNA aminoacylation	7.72E-04
36	GO:0045905: positive regulation of translational termination	7.72E-04
37	GO:0071668: plant-type cell wall assembly	7.72E-04
38	GO:0045901: positive regulation of translational elongation	7.72E-04
39	GO:0006123: mitochondrial electron transport, cytochrome c to oxygen	7.72E-04
40	GO:0046686: response to cadmium ion	8.71E-04
41	GO:0006820: anion transport	1.03E-03
42	GO:0010498: proteasomal protein catabolic process	1.25E-03
43	GO:0080121: AMP transport	1.25E-03
44	GO:0045793: positive regulation of cell size	1.25E-03
45	GO:0006760: folic acid-containing compound metabolic process	1.25E-03
46	GO:0010043: response to zinc ion	1.43E-03
47	GO:0007030: Golgi organization	1.47E-03
48	GO:0009735: response to cytokinin	1.77E-03
49	GO:0006107: oxaloacetate metabolic process	1.80E-03
50	GO:0006241: CTP biosynthetic process	1.80E-03
51	GO:0009647: skotomorphogenesis	1.80E-03
52	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	1.80E-03
53	GO:0010255: glucose mediated signaling pathway	1.80E-03
54	GO:0006165: nucleoside diphosphate phosphorylation	1.80E-03
55	GO:0006228: UTP biosynthetic process	1.80E-03
56	GO:0006168: adenine salvage	1.80E-03
57	GO:0001676: long-chain fatty acid metabolic process	1.80E-03
58	GO:0032877: positive regulation of DNA endoreduplication	1.80E-03
59	GO:0046836: glycolipid transport	1.80E-03
60	GO:0006166: purine ribonucleoside salvage	1.80E-03
61	GO:0006487: protein N-linked glycosylation	1.82E-03
62	GO:0061077: chaperone-mediated protein folding	2.20E-03
63	GO:0008283: cell proliferation	2.21E-03
64	GO:0016226: iron-sulfur cluster assembly	2.41E-03
65	GO:0006183: GTP biosynthetic process	2.42E-03
66	GO:0010363: regulation of plant-type hypersensitive response	2.42E-03
67	GO:0006221: pyrimidine nucleotide biosynthetic process	2.42E-03
68	GO:0015867: ATP transport	2.42E-03
69	GO:0032366: intracellular sterol transport	2.42E-03
70	GO:0044205: 'de novo' UMP biosynthetic process	2.42E-03
71	GO:0051781: positive regulation of cell division	2.42E-03
72	GO:0042147: retrograde transport, endosome to Golgi	3.09E-03
73	GO:0010117: photoprotection	3.09E-03
74	GO:1902183: regulation of shoot apical meristem development	3.09E-03
75	GO:0044209: AMP salvage	3.09E-03
76	GO:0000413: protein peptidyl-prolyl isomerization	3.34E-03
77	GO:0015991: ATP hydrolysis coupled proton transport	3.34E-03
78	GO:0006662: glycerol ether metabolic process	3.61E-03
79	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	3.82E-03
80	GO:0015866: ADP transport	3.82E-03
81	GO:0010183: pollen tube guidance	4.16E-03
82	GO:1901001: negative regulation of response to salt stress	4.60E-03
83	GO:0006120: mitochondrial electron transport, NADH to ubiquinone	4.60E-03
84	GO:0009554: megasporogenesis	4.60E-03
85	GO:0030163: protein catabolic process	5.07E-03
86	GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process	5.44E-03
87	GO:0010044: response to aluminum ion	5.44E-03
88	GO:0032880: regulation of protein localization	5.44E-03
89	GO:0048528: post-embryonic root development	5.44E-03
90	GO:0009690: cytokinin metabolic process	6.32E-03
91	GO:0006506: GPI anchor biosynthetic process	6.32E-03
92	GO:0031540: regulation of anthocyanin biosynthetic process	6.32E-03
93	GO:0006526: arginine biosynthetic process	7.25E-03
94	GO:0009808: lignin metabolic process	7.25E-03
95	GO:0046685: response to arsenic-containing substance	8.22E-03
96	GO:0010206: photosystem II repair	8.22E-03
97	GO:0006754: ATP biosynthetic process	8.22E-03
98	GO:0048589: developmental growth	8.22E-03
99	GO:0015780: nucleotide-sugar transport	8.22E-03
100	GO:0000387: spliceosomal snRNP assembly	9.24E-03
101	GO:0010449: root meristem growth	9.24E-03
102	GO:0000103: sulfate assimilation	1.03E-02
103	GO:0043069: negative regulation of programmed cell death	1.03E-02
104	GO:0009853: photorespiration	1.07E-02
105	GO:0034599: cellular response to oxidative stress	1.12E-02
106	GO:0052544: defense response by callose deposition in cell wall	1.14E-02
107	GO:0048229: gametophyte development	1.14E-02
108	GO:0006839: mitochondrial transport	1.22E-02
109	GO:0016925: protein sumoylation	1.26E-02
110	GO:0006631: fatty acid metabolic process	1.27E-02
111	GO:0010628: positive regulation of gene expression	1.38E-02
112	GO:0010102: lateral root morphogenesis	1.38E-02
113	GO:0006626: protein targeting to mitochondrion	1.38E-02
114	GO:0006807: nitrogen compound metabolic process	1.38E-02
115	GO:0006108: malate metabolic process	1.38E-02
116	GO:0006006: glucose metabolic process	1.38E-02
117	GO:0048467: gynoecium development	1.50E-02
118	GO:0007034: vacuolar transport	1.50E-02
119	GO:0006855: drug transmembrane transport	1.61E-02
120	GO:0019853: L-ascorbic acid biosynthetic process	1.62E-02
121	GO:0009793: embryo development ending in seed dormancy	1.68E-02
122	GO:0009116: nucleoside metabolic process	1.89E-02
123	GO:0006406: mRNA export from nucleus	1.89E-02
124	GO:0006289: nucleotide-excision repair	1.89E-02
125	GO:0015992: proton transport	2.17E-02
126	GO:0048511: rhythmic process	2.17E-02
127	GO:0010431: seed maturation	2.17E-02
128	GO:0030433: ubiquitin-dependent ERAD pathway	2.31E-02
129	GO:0007005: mitochondrion organization	2.31E-02
130	GO:0006012: galactose metabolic process	2.46E-02
131	GO:0042742: defense response to bacterium	2.48E-02
132	GO:0009553: embryo sac development	2.58E-02
133	GO:0010584: pollen exine formation	2.61E-02
134	GO:0010089: xylem development	2.61E-02
135	GO:0045454: cell redox homeostasis	2.92E-02
136	GO:0034220: ion transmembrane transport	2.92E-02
137	GO:0010051: xylem and phloem pattern formation	2.92E-02
138	GO:0010118: stomatal movement	2.92E-02
139	GO:0000398: mRNA splicing, via spliceosome	3.07E-02
140	GO:0061025: membrane fusion	3.25E-02
141	GO:0006623: protein targeting to vacuole	3.41E-02
142	GO:0048825: cotyledon development	3.41E-02
143	GO:0009556: microsporogenesis	3.41E-02
144	GO:0080156: mitochondrial mRNA modification	3.58E-02
145	GO:0010193: response to ozone	3.58E-02
146	GO:0006635: fatty acid beta-oxidation	3.58E-02
147	GO:0009630: gravitropism	3.75E-02
148	GO:0009408: response to heat	3.78E-02
149	GO:0010252: auxin homeostasis	4.11E-02
150	GO:0006914: autophagy	4.11E-02
151	GO:0006633: fatty acid biosynthetic process	4.17E-02
152	GO:0010286: heat acclimation	4.29E-02
153	GO:0055114: oxidation-reduction process	4.31E-02
154	GO:0000910: cytokinesis	4.47E-02
155	GO:0010029: regulation of seed germination	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0050152: omega-amidase activity	0.00E+00
2	GO:0010472: GDP-galactose:glucose-1-phosphate guanylyltransferase activity	0.00E+00
3	GO:0004151: dihydroorotase activity	0.00E+00
4	GO:0010471: GDP-galactose:mannose-1-phosphate guanylyltransferase activity	0.00E+00
5	GO:0008777: acetylornithine deacetylase activity	0.00E+00
6	GO:0008670: 2,4-dienoyl-CoA reductase (NADPH) activity	0.00E+00
7	GO:0008928: mannose-1-phosphate guanylyltransferase (GDP) activity	0.00E+00
8	GO:0005463: UDP-N-acetylgalactosamine transmembrane transporter activity	0.00E+00
9	GO:0010474: glucose-1-phosphate guanylyltransferase (GDP) activity	0.00E+00
10	GO:0010473: GDP-galactose:myoinositol-1-phosphate guanylyltransferase activity	0.00E+00
11	GO:0004298: threonine-type endopeptidase activity	7.69E-36
12	GO:0003735: structural constituent of ribosome	1.09E-24
13	GO:0008233: peptidase activity	6.16E-20
14	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	5.05E-05
15	GO:0004576: oligosaccharyl transferase activity	7.81E-05
16	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	1.22E-04
17	GO:0031177: phosphopantetheine binding	1.76E-04
18	GO:0000035: acyl binding	2.38E-04
19	GO:0005347: ATP transmembrane transporter activity	2.38E-04
20	GO:0008121: ubiquinol-cytochrome-c reductase activity	3.09E-04
21	GO:0000824: inositol tetrakisphosphate 3-kinase activity	3.55E-04
22	GO:0010475: galactose-1-phosphate guanylyltransferase (GDP) activity	3.55E-04
23	GO:0080047: GDP-L-galactose phosphorylase activity	3.55E-04
24	GO:0047326: inositol tetrakisphosphate 5-kinase activity	3.55E-04
25	GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity	3.55E-04
26	GO:0019786: Atg8-specific protease activity	3.55E-04
27	GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity	3.55E-04
28	GO:0080048: GDP-D-glucose phosphorylase activity	3.55E-04
29	GO:0015137: citrate transmembrane transporter activity	3.55E-04
30	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	3.89E-04
31	GO:0015288: porin activity	3.89E-04
32	GO:0008308: voltage-gated anion channel activity	4.76E-04
33	GO:1990585: hydroxyproline O-arabinosyltransferase activity	7.72E-04
34	GO:0032934: sterol binding	7.72E-04
35	GO:0004826: phenylalanine-tRNA ligase activity	7.72E-04
36	GO:0019779: Atg8 activating enzyme activity	7.72E-04
37	GO:0008517: folic acid transporter activity	7.72E-04
38	GO:0046961: proton-transporting ATPase activity, rotational mechanism	9.04E-04
39	GO:0004129: cytochrome-c oxidase activity	9.04E-04
40	GO:0005047: signal recognition particle binding	1.25E-03
41	GO:0050897: cobalt ion binding	1.43E-03
42	GO:0003746: translation elongation factor activity	1.60E-03
43	GO:0003999: adenine phosphoribosyltransferase activity	1.80E-03
44	GO:0004550: nucleoside diphosphate kinase activity	1.80E-03
45	GO:0008097: 5S rRNA binding	1.80E-03
46	GO:0017089: glycolipid transporter activity	1.80E-03
47	GO:0043130: ubiquitin binding	1.82E-03
48	GO:0005528: FK506 binding	1.82E-03
49	GO:0003729: mRNA binding	2.28E-03
50	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	2.42E-03
51	GO:0070628: proteasome binding	2.42E-03
52	GO:0016820: hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances	2.42E-03
53	GO:0050302: indole-3-acetaldehyde oxidase activity	2.42E-03
54	GO:0019776: Atg8 ligase activity	2.42E-03
55	GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	2.42E-03
56	GO:0010011: auxin binding	2.42E-03
57	GO:0051861: glycolipid binding	2.42E-03
58	GO:0008198: ferrous iron binding	3.09E-03
59	GO:0080122: AMP transmembrane transporter activity	3.09E-03
60	GO:0031386: protein tag	3.09E-03
61	GO:0047134: protein-disulfide reductase activity	3.09E-03
62	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	3.61E-03
63	GO:0031593: polyubiquitin binding	3.82E-03
64	GO:0051117: ATPase binding	3.82E-03
65	GO:0036402: proteasome-activating ATPase activity	3.82E-03
66	GO:0080046: quercetin 4'-O-glucosyltransferase activity	3.82E-03
67	GO:0004791: thioredoxin-disulfide reductase activity	3.88E-03
68	GO:0008137: NADH dehydrogenase (ubiquinone) activity	4.45E-03
69	GO:0102391: decanoate--CoA ligase activity	4.60E-03
70	GO:0004602: glutathione peroxidase activity	4.60E-03
71	GO:0015217: ADP transmembrane transporter activity	4.60E-03
72	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	5.07E-03
73	GO:0015035: protein disulfide oxidoreductase activity	5.27E-03
74	GO:0005338: nucleotide-sugar transmembrane transporter activity	5.44E-03
75	GO:0042162: telomeric DNA binding	5.44E-03
76	GO:0008143: poly(A) binding	5.44E-03
77	GO:0005085: guanyl-nucleotide exchange factor activity	5.44E-03
78	GO:0004467: long-chain fatty acid-CoA ligase activity	5.44E-03
79	GO:0004034: aldose 1-epimerase activity	6.32E-03
80	GO:0043022: ribosome binding	6.32E-03
81	GO:0019843: rRNA binding	6.76E-03
82	GO:0003697: single-stranded DNA binding	1.07E-02
83	GO:0008794: arsenate reductase (glutaredoxin) activity	1.14E-02
84	GO:0008559: xenobiotic-transporting ATPase activity	1.14E-02
85	GO:0000049: tRNA binding	1.26E-02
86	GO:0004175: endopeptidase activity	1.50E-02
87	GO:0043621: protein self-association	1.50E-02
88	GO:0051537: 2 iron, 2 sulfur cluster binding	1.50E-02
89	GO:0005198: structural molecule activity	1.55E-02
90	GO:0017025: TBP-class protein binding	1.62E-02
91	GO:0004540: ribonuclease activity	2.17E-02
92	GO:0008080: N-acetyltransferase activity	3.08E-02
93	GO:0004872: receptor activity	3.41E-02
94	GO:0003684: damaged DNA binding	4.11E-02
95	GO:0005507: copper ion binding	4.12E-02
96	GO:0009055: electron carrier activity	4.12E-02
97	GO:0008237: metallopeptidase activity	4.29E-02
98	GO:0046872: metal ion binding	4.34E-02
99	GO:0016597: amino acid binding	4.47E-02
100	GO:0051213: dioxygenase activity	4.65E-02
101	GO:0015250: water channel activity	4.65E-02

Rank	GO Term	Adjusted P value
1	GO:0097361: CIA complex	0.00E+00
2	GO:0005839: proteasome core complex	7.69E-36
3	GO:0000502: proteasome complex	2.62E-34
4	GO:0005840: ribosome	2.15E-22
5	GO:0019773: proteasome core complex, alpha-subunit complex	4.17E-19
6	GO:0005829: cytosol	8.66E-19
7	GO:0022626: cytosolic ribosome	1.07E-18
8	GO:0022625: cytosolic large ribosomal subunit	3.16E-18
9	GO:0005774: vacuolar membrane	5.02E-16
10	GO:0005737: cytoplasm	1.22E-09
11	GO:0005773: vacuole	1.22E-09
12	GO:0005753: mitochondrial proton-transporting ATP synthase complex	8.41E-08
13	GO:0022627: cytosolic small ribosomal subunit	1.16E-07
14	GO:0005750: mitochondrial respiratory chain complex III	3.19E-06
15	GO:0005747: mitochondrial respiratory chain complex I	1.00E-05
16	GO:0005730: nucleolus	2.38E-05
17	GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)	7.81E-05
18	GO:0008250: oligosaccharyltransferase complex	1.22E-04
19	GO:0005758: mitochondrial intermembrane space	1.57E-04
20	GO:0030904: retromer complex	1.76E-04
21	GO:0005771: multivesicular body	1.76E-04
22	GO:0005732: small nucleolar ribonucleoprotein complex	1.77E-04
23	GO:0070469: respiratory chain	1.81E-04
24	GO:0005783: endoplasmic reticulum	2.51E-04
25	GO:0019774: proteasome core complex, beta-subunit complex	3.55E-04
26	GO:0046930: pore complex	4.76E-04
27	GO:0035145: exon-exon junction complex	7.72E-04
28	GO:0005697: telomerase holoenzyme complex	7.72E-04
29	GO:0033178: proton-transporting two-sector ATPase complex, catalytic domain	7.72E-04
30	GO:0008541: proteasome regulatory particle, lid subcomplex	9.04E-04
31	GO:0005788: endoplasmic reticulum lumen	9.14E-04
32	GO:0046861: glyoxysomal membrane	1.25E-03
33	GO:0005853: eukaryotic translation elongation factor 1 complex	1.25E-03
34	GO:0015934: large ribosomal subunit	1.43E-03
35	GO:0033180: proton-transporting V-type ATPase, V1 domain	1.80E-03
36	GO:1990726: Lsm1-7-Pat1 complex	1.80E-03
37	GO:0005775: vacuolar lumen	1.80E-03
38	GO:0005759: mitochondrial matrix	1.84E-03
39	GO:0045271: respiratory chain complex I	2.00E-03
40	GO:0015935: small ribosomal subunit	2.20E-03
41	GO:0005741: mitochondrial outer membrane	2.20E-03
42	GO:0009526: plastid envelope	2.42E-03
43	GO:0005776: autophagosome	2.42E-03
44	GO:0016471: vacuolar proton-transporting V-type ATPase complex	2.42E-03
45	GO:0009507: chloroplast	2.44E-03
46	GO:0005746: mitochondrial respiratory chain	3.09E-03
47	GO:0016020: membrane	3.42E-03
48	GO:0005739: mitochondrion	3.78E-03
49	GO:0009536: plastid	4.33E-03
50	GO:0005801: cis-Golgi network	4.60E-03
51	GO:0031597: cytosolic proteasome complex	4.60E-03
52	GO:0031595: nuclear proteasome complex	5.44E-03
53	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	6.32E-03
54	GO:0005688: U6 snRNP	6.32E-03
55	GO:0000421: autophagosome membrane	6.32E-03
56	GO:0045273: respiratory chain complex II	6.32E-03
57	GO:0009514: glyoxysome	7.25E-03
58	GO:0046540: U4/U6 x U5 tri-snRNP complex	7.25E-03
59	GO:0005794: Golgi apparatus	7.59E-03
60	GO:0031090: organelle membrane	8.22E-03
61	GO:0005763: mitochondrial small ribosomal subunit	8.22E-03
62	GO:0008540: proteasome regulatory particle, base subcomplex	9.24E-03
63	GO:0071011: precatalytic spliceosome	9.24E-03
64	GO:0005743: mitochondrial inner membrane	9.32E-03
65	GO:0000325: plant-type vacuole	9.74E-03
66	GO:0071013: catalytic step 2 spliceosome	1.14E-02
67	GO:0005665: DNA-directed RNA polymerase II, core complex	1.26E-02
68	GO:0031902: late endosome membrane	1.27E-02
69	GO:0009508: plastid chromosome	1.38E-02
70	GO:0019013: viral nucleocapsid	1.38E-02
71	GO:0031966: mitochondrial membrane	1.74E-02
72	GO:0005769: early endosome	1.76E-02
73	GO:0000419: DNA-directed RNA polymerase V complex	1.76E-02
74	GO:0042651: thylakoid membrane	2.03E-02
75	GO:0005618: cell wall	2.22E-02
76	GO:0016607: nuclear speck	2.28E-02
77	GO:0031410: cytoplasmic vesicle	2.31E-02
78	GO:0005777: peroxisome	3.01E-02
79	GO:0009543: chloroplast thylakoid lumen	3.33E-02
80	GO:0009295: nucleoid	4.29E-02
81	GO:0009506: plasmodesma	4.43E-02
82	GO:0009705: plant-type vacuole membrane	4.58E-02
83	GO:0000932: P-body	4.65E-02
84	GO:0005886: plasma membrane	4.92E-02