co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G67150

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0018316: peptide cross-linking via L-cystine	0.00E+00
2	GO:0090470: shoot organ boundary specification	0.00E+00
3	GO:0009098: leucine biosynthetic process	4.53E-08
4	GO:0019761: glucosinolate biosynthetic process	1.14E-07
5	GO:0010207: photosystem II assembly	1.61E-05
6	GO:0009902: chloroplast relocation	2.01E-05
7	GO:0048564: photosystem I assembly	1.18E-04
8	GO:0034971: histone H3-R17 methylation	1.60E-04
9	GO:0042371: vitamin K biosynthetic process	1.60E-04
10	GO:0071454: cellular response to anoxia	1.60E-04
11	GO:0071461: cellular response to redox state	1.60E-04
12	GO:0080065: 4-alpha-methyl-delta7-sterol oxidation	1.60E-04
13	GO:0034970: histone H3-R2 methylation	1.60E-04
14	GO:0010362: negative regulation of anion channel activity by blue light	1.60E-04
15	GO:0034972: histone H3-R26 methylation	1.60E-04
16	GO:1902265: abscisic acid homeostasis	1.60E-04
17	GO:0080005: photosystem stoichiometry adjustment	3.65E-04
18	GO:0007154: cell communication	3.65E-04
19	GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation	3.65E-04
20	GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine	3.65E-04
21	GO:0080153: negative regulation of reductive pentose-phosphate cycle	3.65E-04
22	GO:0010275: NAD(P)H dehydrogenase complex assembly	3.65E-04
23	GO:0060359: response to ammonium ion	3.65E-04
24	GO:2000030: regulation of response to red or far red light	3.65E-04
25	GO:0009767: photosynthetic electron transport chain	3.89E-04
26	GO:0006696: ergosterol biosynthetic process	5.97E-04
27	GO:0044375: regulation of peroxisome size	5.97E-04
28	GO:0043157: response to cation stress	5.97E-04
29	GO:0031022: nuclear migration along microfilament	5.97E-04
30	GO:0009658: chloroplast organization	7.28E-04
31	GO:0033014: tetrapyrrole biosynthetic process	8.53E-04
32	GO:2001141: regulation of RNA biosynthetic process	8.53E-04
33	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	8.53E-04
34	GO:0010371: regulation of gibberellin biosynthetic process	8.53E-04
35	GO:0016117: carotenoid biosynthetic process	1.01E-03
36	GO:0010021: amylopectin biosynthetic process	1.13E-03
37	GO:0035434: copper ion transmembrane transport	1.43E-03
38	GO:0016120: carotene biosynthetic process	1.43E-03
39	GO:0010190: cytochrome b6f complex assembly	1.76E-03
40	GO:0010304: PSII associated light-harvesting complex II catabolic process	1.76E-03
41	GO:0009959: negative gravitropism	1.76E-03
42	GO:0006555: methionine metabolic process	1.76E-03
43	GO:0016126: sterol biosynthetic process	2.07E-03
44	GO:0009903: chloroplast avoidance movement	2.11E-03
45	GO:0010019: chloroplast-nucleus signaling pathway	2.11E-03
46	GO:0019509: L-methionine salvage from methylthioadenosine	2.11E-03
47	GO:0010038: response to metal ion	2.48E-03
48	GO:0010228: vegetative to reproductive phase transition of meristem	2.51E-03
49	GO:0006508: proteolysis	2.54E-03
50	GO:0009231: riboflavin biosynthetic process	2.88E-03
51	GO:0016559: peroxisome fission	2.88E-03
52	GO:0007155: cell adhesion	2.88E-03
53	GO:0009787: regulation of abscisic acid-activated signaling pathway	2.88E-03
54	GO:0071482: cellular response to light stimulus	3.29E-03
55	GO:0022900: electron transport chain	3.29E-03
56	GO:0009637: response to blue light	3.40E-03
57	GO:0009821: alkaloid biosynthetic process	3.72E-03
58	GO:0034765: regulation of ion transmembrane transport	3.72E-03
59	GO:0046916: cellular transition metal ion homeostasis	3.72E-03
60	GO:0006783: heme biosynthetic process	3.72E-03
61	GO:0009638: phototropism	4.17E-03
62	GO:0006779: porphyrin-containing compound biosynthetic process	4.17E-03
63	GO:0048354: mucilage biosynthetic process involved in seed coat development	4.17E-03
64	GO:0045036: protein targeting to chloroplast	4.64E-03
65	GO:0010192: mucilage biosynthetic process	4.64E-03
66	GO:0051555: flavonol biosynthetic process	4.64E-03
67	GO:0043085: positive regulation of catalytic activity	5.12E-03
68	GO:0006352: DNA-templated transcription, initiation	5.12E-03
69	GO:0009684: indoleacetic acid biosynthetic process	5.12E-03
70	GO:0008285: negative regulation of cell proliferation	5.12E-03
71	GO:0030048: actin filament-based movement	6.14E-03
72	GO:0034605: cellular response to heat	6.67E-03
73	GO:0019253: reductive pentose-phosphate cycle	6.67E-03
74	GO:0007031: peroxisome organization	7.22E-03
75	GO:0009825: multidimensional cell growth	7.22E-03
76	GO:0006071: glycerol metabolic process	7.79E-03
77	GO:0055114: oxidation-reduction process	8.54E-03
78	GO:0010073: meristem maintenance	8.97E-03
79	GO:0006825: copper ion transport	8.97E-03
80	GO:0007017: microtubule-based process	8.97E-03
81	GO:0098542: defense response to other organism	9.59E-03
82	GO:0016226: iron-sulfur cluster assembly	1.02E-02
83	GO:0010227: floral organ abscission	1.09E-02
84	GO:0006817: phosphate ion transport	1.15E-02
85	GO:0070417: cellular response to cold	1.22E-02
86	GO:0010118: stomatal movement	1.29E-02
87	GO:0042391: regulation of membrane potential	1.29E-02
88	GO:0010197: polar nucleus fusion	1.36E-02
89	GO:0007623: circadian rhythm	1.45E-02
90	GO:0019252: starch biosynthetic process	1.50E-02
91	GO:0009791: post-embryonic development	1.50E-02
92	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.58E-02
93	GO:0009630: gravitropism	1.65E-02
94	GO:0030163: protein catabolic process	1.73E-02
95	GO:0009416: response to light stimulus	1.84E-02
96	GO:0071805: potassium ion transmembrane transport	1.89E-02
97	GO:0010027: thylakoid membrane organization	2.05E-02
98	GO:0010029: regulation of seed germination	2.13E-02
99	GO:0009816: defense response to bacterium, incompatible interaction	2.13E-02
100	GO:0006810: transport	2.23E-02
101	GO:0015995: chlorophyll biosynthetic process	2.30E-02
102	GO:0018298: protein-chromophore linkage	2.47E-02
103	GO:0000160: phosphorelay signal transduction system	2.56E-02
104	GO:0009407: toxin catabolic process	2.65E-02
105	GO:0006811: ion transport	2.65E-02
106	GO:0010043: response to zinc ion	2.74E-02
107	GO:0007568: aging	2.74E-02
108	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.89E-02
109	GO:0046777: protein autophosphorylation	2.98E-02
110	GO:0030001: metal ion transport	3.21E-02
111	GO:0009744: response to sucrose	3.51E-02
112	GO:0009640: photomorphogenesis	3.51E-02
113	GO:0009636: response to toxic substance	3.81E-02
114	GO:0042538: hyperosmotic salinity response	4.12E-02
115	GO:0009809: lignin biosynthetic process	4.34E-02
116	GO:0051603: proteolysis involved in cellular protein catabolic process	4.44E-02
117	GO:0009909: regulation of flower development	4.66E-02

Rank	GO Term	Adjusted P value
1	GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity	0.00E+00
2	GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity	0.00E+00
3	GO:0045436: lycopene beta cyclase activity	0.00E+00
4	GO:0009673: low-affinity phosphate transmembrane transporter activity	0.00E+00
5	GO:0050486: intramolecular transferase activity, transferring hydroxy groups	0.00E+00
6	GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity	0.00E+00
7	GO:0046905: phytoene synthase activity	0.00E+00
8	GO:0003862: 3-isopropylmalate dehydrogenase activity	1.25E-06
9	GO:0048038: quinone binding	4.35E-06
10	GO:0004180: carboxypeptidase activity	4.66E-06
11	GO:0003861: 3-isopropylmalate dehydratase activity	4.66E-06
12	GO:0000254: C-4 methylsterol oxidase activity	1.08E-05
13	GO:0019899: enzyme binding	9.14E-05
14	GO:0016783: sulfurtransferase activity	1.60E-04
15	GO:0080105: 6-methylthiopropyl glucosinolate S-oxygenase activity	1.60E-04
16	GO:0004328: formamidase activity	1.60E-04
17	GO:0030941: chloroplast targeting sequence binding	1.60E-04
18	GO:0016784: 3-mercaptopyruvate sulfurtransferase activity	1.60E-04
19	GO:0046906: tetrapyrrole binding	1.60E-04
20	GO:0004325: ferrochelatase activity	1.60E-04
21	GO:0051996: squalene synthase activity	1.60E-04
22	GO:0004310: farnesyl-diphosphate farnesyltransferase activity	3.65E-04
23	GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity	3.65E-04
24	GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity	3.65E-04
25	GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity	3.65E-04
26	GO:0080102: 3-methylthiopropyl glucosinolate S-oxygenase activity	3.65E-04
27	GO:0033201: alpha-1,4-glucan synthase activity	3.65E-04
28	GO:0080104: 5-methylthiopropyl glucosinolate S-oxygenase activity	3.65E-04
29	GO:0004046: aminoacylase activity	3.65E-04
30	GO:0080106: 7-methylthiopropyl glucosinolate S-oxygenase activity	3.65E-04
31	GO:0035241: protein-arginine omega-N monomethyltransferase activity	3.65E-04
32	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	5.97E-04
33	GO:0008469: histone-arginine N-methyltransferase activity	5.97E-04
34	GO:0008430: selenium binding	5.97E-04
35	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	5.97E-04
36	GO:0004373: glycogen (starch) synthase activity	5.97E-04
37	GO:0032947: protein complex scaffold	5.97E-04
38	GO:0004848: ureidoglycolate hydrolase activity	5.97E-04
39	GO:0080103: 4-methylthiopropyl glucosinolate S-oxygenase activity	5.97E-04
40	GO:0003935: GTP cyclohydrolase II activity	5.97E-04
41	GO:0005506: iron ion binding	8.42E-04
42	GO:0080107: 8-methylthiopropyl glucosinolate S-oxygenase activity	8.53E-04
43	GO:0004792: thiosulfate sulfurtransferase activity	8.53E-04
44	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	8.53E-04
45	GO:0009882: blue light photoreceptor activity	8.53E-04
46	GO:0016851: magnesium chelatase activity	8.53E-04
47	GO:0009011: starch synthase activity	1.13E-03
48	GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	1.13E-03
49	GO:0001053: plastid sigma factor activity	1.13E-03
50	GO:0016836: hydro-lyase activity	1.13E-03
51	GO:0051861: glycolipid binding	1.13E-03
52	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.13E-03
53	GO:0016987: sigma factor activity	1.13E-03
54	GO:0000293: ferric-chelate reductase activity	1.76E-03
55	GO:0005242: inward rectifier potassium channel activity	2.11E-03
56	GO:0030247: polysaccharide binding	2.43E-03
57	GO:0016621: cinnamoyl-CoA reductase activity	2.48E-03
58	GO:0008236: serine-type peptidase activity	2.56E-03
59	GO:0004222: metalloendopeptidase activity	2.96E-03
60	GO:0042802: identical protein binding	3.20E-03
61	GO:0046914: transition metal ion binding	3.29E-03
62	GO:0005375: copper ion transmembrane transporter activity	3.29E-03
63	GO:0008889: glycerophosphodiester phosphodiesterase activity	3.72E-03
64	GO:0016844: strictosidine synthase activity	4.17E-03
65	GO:0051287: NAD binding	5.28E-03
66	GO:0016491: oxidoreductase activity	5.43E-03
67	GO:0005315: inorganic phosphate transmembrane transporter activity	6.14E-03
68	GO:0031072: heat shock protein binding	6.14E-03
69	GO:0000155: phosphorelay sensor kinase activity	6.14E-03
70	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	6.67E-03
71	GO:0051536: iron-sulfur cluster binding	8.38E-03
72	GO:0004176: ATP-dependent peptidase activity	9.59E-03
73	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.08E-02
74	GO:0004499: N,N-dimethylaniline monooxygenase activity	1.15E-02
75	GO:0005249: voltage-gated potassium channel activity	1.29E-02
76	GO:0030551: cyclic nucleotide binding	1.29E-02
77	GO:0008080: N-acetyltransferase activity	1.36E-02
78	GO:0050662: coenzyme binding	1.43E-02
79	GO:0010181: FMN binding	1.43E-02
80	GO:0008194: UDP-glycosyltransferase activity	1.62E-02
81	GO:0008237: metallopeptidase activity	1.89E-02
82	GO:0000287: magnesium ion binding	2.21E-02
83	GO:0004497: monooxygenase activity	2.79E-02
84	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.93E-02
85	GO:0050661: NADP binding	3.21E-02
86	GO:0051539: 4 iron, 4 sulfur cluster binding	3.21E-02
87	GO:0004364: glutathione transferase activity	3.41E-02
88	GO:0004185: serine-type carboxypeptidase activity	3.51E-02
89	GO:0051537: 2 iron, 2 sulfur cluster binding	3.71E-02
90	GO:0015293: symporter activity	3.81E-02
91	GO:0005198: structural molecule activity	3.81E-02
92	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	4.34E-02
93	GO:0003777: microtubule motor activity	4.66E-02
94	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	6.80E-21
2	GO:0009535: chloroplast thylakoid membrane	2.92E-10
3	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	3.45E-06
4	GO:0031969: chloroplast membrane	1.81E-05
5	GO:0031972: chloroplast intermembrane space	1.60E-04
6	GO:0009570: chloroplast stroma	1.94E-04
7	GO:0009897: external side of plasma membrane	5.97E-04
8	GO:0030286: dynein complex	1.13E-03
9	GO:0009536: plastid	1.29E-03
10	GO:0055035: plastid thylakoid membrane	1.43E-03
11	GO:0031359: integral component of chloroplast outer membrane	2.48E-03
12	GO:0009501: amyloplast	2.88E-03
13	GO:0005779: integral component of peroxisomal membrane	3.29E-03
14	GO:0005875: microtubule associated complex	7.79E-03
15	GO:0043234: protein complex	7.79E-03
16	GO:0005773: vacuole	8.29E-03
17	GO:0009543: chloroplast thylakoid lumen	1.05E-02
18	GO:0005778: peroxisomal membrane	1.89E-02
19	GO:0046658: anchored component of plasma membrane	1.92E-02
20	GO:0005777: peroxisome	2.19E-02
21	GO:0009534: chloroplast thylakoid	2.33E-02
22	GO:0005789: endoplasmic reticulum membrane	2.37E-02
23	GO:0009707: chloroplast outer membrane	2.47E-02
24	GO:0031225: anchored component of membrane	3.20E-02
25	GO:0016021: integral component of membrane	3.70E-02