Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G65900

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0039694: viral RNA genome replication0.00E+00
2GO:0071426: ribonucleoprotein complex export from nucleus0.00E+00
3GO:0006364: rRNA processing3.71E-07
4GO:0010501: RNA secondary structure unwinding1.05E-06
5GO:0006606: protein import into nucleus1.05E-06
6GO:0006405: RNA export from nucleus1.27E-06
7GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)2.93E-06
8GO:0036228: protein targeting to nuclear inner membrane2.30E-05
9GO:0000469: cleavage involved in rRNA processing2.30E-05
10GO:0030490: maturation of SSU-rRNA2.30E-05
11GO:0010930: negative regulation of auxin mediated signaling pathway2.30E-05
12GO:0000972: transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery2.30E-05
13GO:0009553: embryo sac development3.43E-05
14GO:0080009: mRNA methylation5.89E-05
15GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)5.89E-05
16GO:0006610: ribosomal protein import into nucleus5.89E-05
17GO:0045604: regulation of epidermal cell differentiation1.04E-04
18GO:0007276: gamete generation1.55E-04
19GO:0016973: poly(A)+ mRNA export from nucleus2.73E-04
20GO:0000060: protein import into nucleus, translocation3.37E-04
21GO:0048444: floral organ morphogenesis4.04E-04
22GO:0010077: maintenance of inflorescence meristem identity4.04E-04
23GO:0045995: regulation of embryonic development4.74E-04
24GO:0000028: ribosomal small subunit assembly5.46E-04
25GO:0019827: stem cell population maintenance5.46E-04
26GO:0006997: nucleus organization6.21E-04
27GO:0009880: embryonic pattern specification6.21E-04
28GO:2000024: regulation of leaf development6.98E-04
29GO:0001708: cell fate specification6.98E-04
30GO:0006607: NLS-bearing protein import into nucleus6.98E-04
31GO:0006349: regulation of gene expression by genetic imprinting7.77E-04
32GO:0009793: embryo development ending in seed dormancy8.97E-04
33GO:0006913: nucleocytoplasmic transport9.42E-04
34GO:0010582: floral meristem determinacy1.03E-03
35GO:0051302: regulation of cell division1.59E-03
36GO:0009561: megagametogenesis2.02E-03
37GO:0051028: mRNA transport2.13E-03
38GO:0010197: polar nucleus fusion2.36E-03
39GO:0009960: endosperm development2.36E-03
40GO:0010305: leaf vascular tissue pattern formation2.36E-03
41GO:0048825: cotyledon development2.60E-03
42GO:0009926: auxin polar transport5.84E-03
43GO:0006260: DNA replication6.66E-03
44GO:0006417: regulation of translation7.70E-03
45GO:0009790: embryo development1.20E-02
46GO:0009451: RNA modification1.37E-02
47GO:0042254: ribosome biogenesis1.86E-02
48GO:0045892: negative regulation of transcription, DNA-templated2.46E-02
49GO:0048364: root development2.91E-02
50GO:0009555: pollen development4.25E-02
51GO:0051301: cell division4.52E-02
RankGO TermAdjusted P value
1GO:0000166: nucleotide binding3.74E-09
2GO:0004004: ATP-dependent RNA helicase activity4.77E-08
3GO:0008026: ATP-dependent helicase activity9.34E-07
4GO:0030515: snoRNA binding4.09E-06
5GO:0003723: RNA binding4.40E-06
6GO:0017056: structural constituent of nuclear pore5.51E-06
7GO:0005487: nucleocytoplasmic transporter activity1.14E-05
8GO:0001054: RNA polymerase I activity1.68E-05
9GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity2.30E-05
10GO:0043021: ribonucleoprotein complex binding5.89E-05
11GO:0003899: DNA-directed 5'-3' RNA polymerase activity4.95E-04
12GO:0005543: phospholipid binding9.42E-04
13GO:0004521: endoribonuclease activity1.03E-03
14GO:0008139: nuclear localization sequence binding1.12E-03
15GO:0003887: DNA-directed DNA polymerase activity1.39E-03
16GO:0008536: Ran GTPase binding2.36E-03
17GO:0008757: S-adenosylmethionine-dependent methyltransferase activity4.03E-03
18GO:0004386: helicase activity9.75E-03
19GO:0008565: protein transporter activity1.22E-02
20GO:0005524: ATP binding2.88E-02
21GO:0004519: endonuclease activity3.00E-02
22GO:0003676: nucleic acid binding4.73E-02
23GO:0005515: protein binding4.90E-02
RankGO TermAdjusted P value
1GO:0034388: Pwp2p-containing subcomplex of 90S preribosome0.00E+00
2GO:0030688: preribosome, small subunit precursor0.00E+00
3GO:0036396: MIS complex0.00E+00
4GO:0019034: viral replication complex0.00E+00
5GO:0005730: nucleolus1.41E-11
6GO:0005634: nucleus2.09E-10
7GO:0034399: nuclear periphery1.62E-08
8GO:0005643: nuclear pore5.41E-06
9GO:0005736: DNA-directed RNA polymerase I complex9.14E-06
10GO:0032040: small-subunit processome1.99E-05
11GO:0044611: nuclear pore inner ring2.30E-05
12GO:0044613: nuclear pore central transport channel5.89E-05
13GO:0070545: PeBoW complex5.89E-05
14GO:0080008: Cul4-RING E3 ubiquitin ligase complex1.77E-04
15GO:0030687: preribosome, large subunit precursor4.74E-04
16GO:0005635: nuclear envelope5.29E-04
17GO:0043234: protein complex1.39E-03
18GO:0031965: nuclear membrane2.60E-03
19GO:0005829: cytosol4.93E-03
20GO:0016607: nuclear speck8.24E-03
21GO:0005834: heterotrimeric G-protein complex8.42E-03
22GO:0009506: plasmodesma4.50E-02
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Gene type



Gene DE type