Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G64940

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010243: response to organonitrogen compound0.00E+00
2GO:0071483: cellular response to blue light1.76E-10
3GO:0042754: negative regulation of circadian rhythm1.35E-08
4GO:0010236: plastoquinone biosynthetic process4.42E-07
5GO:0009658: chloroplast organization1.21E-06
6GO:0048574: long-day photoperiodism, flowering2.58E-06
7GO:0008299: isoprenoid biosynthetic process1.76E-05
8GO:0043496: regulation of protein homodimerization activity3.21E-05
9GO:0006898: receptor-mediated endocytosis3.21E-05
10GO:0071805: potassium ion transmembrane transport6.26E-05
11GO:2001141: regulation of RNA biosynthetic process8.79E-05
12GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity8.79E-05
13GO:0006546: glycine catabolic process1.22E-04
14GO:0019464: glycine decarboxylation via glycine cleavage system1.22E-04
15GO:0009904: chloroplast accumulation movement1.59E-04
16GO:0009903: chloroplast avoidance movement2.39E-04
17GO:0010189: vitamin E biosynthetic process2.39E-04
18GO:0009648: photoperiodism2.39E-04
19GO:0070370: cellular heat acclimation2.82E-04
20GO:0045893: positive regulation of transcription, DNA-templated3.14E-04
21GO:0010100: negative regulation of photomorphogenesis3.73E-04
22GO:0009932: cell tip growth3.73E-04
23GO:0034765: regulation of ion transmembrane transport4.21E-04
24GO:0009970: cellular response to sulfate starvation5.20E-04
25GO:0006995: cellular response to nitrogen starvation5.20E-04
26GO:0007623: circadian rhythm5.51E-04
27GO:0006352: DNA-templated transcription, initiation5.71E-04
28GO:0016485: protein processing5.71E-04
29GO:0009739: response to gibberellin6.14E-04
30GO:0010207: photosystem II assembly7.31E-04
31GO:0007015: actin filament organization7.31E-04
32GO:0009409: response to cold9.38E-04
33GO:0009723: response to ethylene9.60E-04
34GO:0015979: photosynthesis1.16E-03
35GO:0042391: regulation of membrane potential1.34E-03
36GO:0010182: sugar mediated signaling pathway1.40E-03
37GO:0009751: response to salicylic acid1.47E-03
38GO:0042752: regulation of circadian rhythm1.47E-03
39GO:0009753: response to jasmonic acid1.59E-03
40GO:0009737: response to abscisic acid1.64E-03
41GO:0008219: cell death2.46E-03
42GO:0009416: response to light stimulus2.60E-03
43GO:0010218: response to far red light2.63E-03
44GO:0009637: response to blue light2.89E-03
45GO:0009651: response to salt stress2.91E-03
46GO:0042542: response to hydrogen peroxide3.33E-03
47GO:0010114: response to red light3.43E-03
48GO:0006813: potassium ion transport4.20E-03
49GO:0009909: regulation of flower development4.50E-03
50GO:0009733: response to auxin5.85E-03
51GO:0042744: hydrogen peroxide catabolic process6.82E-03
52GO:0016036: cellular response to phosphate starvation7.42E-03
53GO:0046686: response to cadmium ion8.12E-03
54GO:0010468: regulation of gene expression8.82E-03
55GO:0045454: cell redox homeostasis1.40E-02
56GO:0045892: negative regulation of transcription, DNA-templated1.41E-02
57GO:0032259: methylation1.57E-02
58GO:0009408: response to heat1.62E-02
59GO:0006281: DNA repair1.62E-02
60GO:0008152: metabolic process1.74E-02
61GO:0035556: intracellular signal transduction2.54E-02
62GO:0006351: transcription, DNA-templated3.19E-02
63GO:0006979: response to oxidative stress4.06E-02
RankGO TermAdjusted P value
1GO:0050342: tocopherol O-methyltransferase activity0.00E+00
2GO:0050347: trans-octaprenyltranstransferase activity1.35E-08
3GO:0052924: all-trans-nonaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific) activity1.35E-08
4GO:0004328: formamidase activity1.21E-05
5GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity1.21E-05
6GO:0004096: catalase activity5.78E-05
7GO:0003913: DNA photolyase activity5.78E-05
8GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides8.79E-05
9GO:0004375: glycine dehydrogenase (decarboxylating) activity8.79E-05
10GO:0001053: plastid sigma factor activity1.22E-04
11GO:0016987: sigma factor activity1.22E-04
12GO:0004709: MAP kinase kinase kinase activity1.98E-04
13GO:0005242: inward rectifier potassium channel activity2.39E-04
14GO:0000989: transcription factor activity, transcription factor binding4.21E-04
15GO:0019904: protein domain specific binding5.71E-04
16GO:0015079: potassium ion transmembrane transporter activity9.61E-04
17GO:0005249: voltage-gated potassium channel activity1.34E-03
18GO:0030551: cyclic nucleotide binding1.34E-03
19GO:0016791: phosphatase activity1.83E-03
20GO:0004721: phosphoprotein phosphatase activity2.30E-03
21GO:0050897: cobalt ion binding2.71E-03
22GO:0030145: manganese ion binding2.71E-03
23GO:0004712: protein serine/threonine/tyrosine kinase activity3.06E-03
24GO:0003899: DNA-directed 5'-3' RNA polymerase activity4.20E-03
25GO:0003700: transcription factor activity, sequence-specific DNA binding9.01E-03
26GO:0042802: identical protein binding9.21E-03
27GO:0016787: hydrolase activity1.12E-02
28GO:0004871: signal transducer activity1.45E-02
29GO:0004722: protein serine/threonine phosphatase activity1.49E-02
30GO:0016887: ATPase activity2.22E-02
31GO:0005515: protein binding3.07E-02
32GO:0003677: DNA binding3.86E-02
33GO:0044212: transcription regulatory region DNA binding4.04E-02
RankGO TermAdjusted P value
1GO:0005960: glycine cleavage complex8.79E-05
2GO:0005777: peroxisome3.14E-04
3GO:0031982: vesicle3.27E-04
4GO:0009514: glyoxysome3.73E-04
5GO:0009532: plastid stroma1.02E-03
6GO:0009507: chloroplast1.53E-03
7GO:0010319: stromule1.91E-03
8GO:0009536: plastid6.39E-03
9GO:0005887: integral component of plasma membrane2.02E-02
10GO:0022626: cytosolic ribosome2.37E-02
11GO:0009570: chloroplast stroma3.44E-02
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Gene type



Gene DE type