co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G64770

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0007172: signal complex assembly	0.00E+00
2	GO:0080127: fruit septum development	0.00E+00
3	GO:0042493: response to drug	0.00E+00
4	GO:0061157: mRNA destabilization	0.00E+00
5	GO:0090706: specification of plant organ position	0.00E+00
6	GO:0045014: negative regulation of transcription by glucose	0.00E+00
7	GO:2000042: negative regulation of double-strand break repair via homologous recombination	0.00E+00
8	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	2.00E-05
9	GO:0030091: protein repair	2.00E-04
10	GO:0000476: maturation of 4.5S rRNA	2.27E-04
11	GO:0000967: rRNA 5'-end processing	2.27E-04
12	GO:0060261: positive regulation of transcription initiation from RNA polymerase II promoter	2.27E-04
13	GO:0015671: oxygen transport	2.27E-04
14	GO:0043007: maintenance of rDNA	2.27E-04
15	GO:0010450: inflorescence meristem growth	2.27E-04
16	GO:0010493: Lewis a epitope biosynthetic process	2.27E-04
17	GO:0048507: meristem development	3.00E-04
18	GO:0006741: NADP biosynthetic process	5.05E-04
19	GO:0018026: peptidyl-lysine monomethylation	5.05E-04
20	GO:0080181: lateral root branching	5.05E-04
21	GO:0034470: ncRNA processing	5.05E-04
22	GO:0015979: photosynthesis	5.43E-04
23	GO:0006954: inflammatory response	8.21E-04
24	GO:0005977: glycogen metabolic process	8.21E-04
25	GO:0045165: cell fate commitment	8.21E-04
26	GO:0019674: NAD metabolic process	8.21E-04
27	GO:0009405: pathogenesis	8.21E-04
28	GO:0005992: trehalose biosynthetic process	9.67E-04
29	GO:0009650: UV protection	1.17E-03
30	GO:0046739: transport of virus in multicellular host	1.17E-03
31	GO:0010321: regulation of vegetative phase change	1.17E-03
32	GO:0019363: pyridine nucleotide biosynthetic process	1.17E-03
33	GO:0010239: chloroplast mRNA processing	1.17E-03
34	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	1.17E-03
35	GO:0010021: amylopectin biosynthetic process	1.56E-03
36	GO:0006552: leucine catabolic process	1.56E-03
37	GO:0016558: protein import into peroxisome matrix	1.99E-03
38	GO:1902183: regulation of shoot apical meristem development	1.99E-03
39	GO:0010158: abaxial cell fate specification	1.99E-03
40	GO:0006465: signal peptide processing	1.99E-03
41	GO:0006656: phosphatidylcholine biosynthetic process	1.99E-03
42	GO:1902456: regulation of stomatal opening	2.45E-03
43	GO:0042793: transcription from plastid promoter	2.45E-03
44	GO:0010190: cytochrome b6f complex assembly	2.45E-03
45	GO:0003006: developmental process involved in reproduction	2.45E-03
46	GO:0042549: photosystem II stabilization	2.45E-03
47	GO:0032502: developmental process	2.49E-03
48	GO:0010189: vitamin E biosynthetic process	2.94E-03
49	GO:1901259: chloroplast rRNA processing	2.94E-03
50	GO:0010027: thylakoid membrane organization	3.36E-03
51	GO:1900057: positive regulation of leaf senescence	3.47E-03
52	GO:0022904: respiratory electron transport chain	3.47E-03
53	GO:0070413: trehalose metabolism in response to stress	4.02E-03
54	GO:0006605: protein targeting	4.02E-03
55	GO:0010492: maintenance of shoot apical meristem identity	4.02E-03
56	GO:0045490: pectin catabolic process	4.43E-03
57	GO:0010093: specification of floral organ identity	4.60E-03
58	GO:0009827: plant-type cell wall modification	4.60E-03
59	GO:0010497: plasmodesmata-mediated intercellular transport	4.60E-03
60	GO:0006810: transport	4.95E-03
61	GO:2000024: regulation of leaf development	5.22E-03
62	GO:0048589: developmental growth	5.22E-03
63	GO:0019432: triglyceride biosynthetic process	5.22E-03
64	GO:0010205: photoinhibition	5.85E-03
65	GO:0006949: syncytium formation	6.51E-03
66	GO:0019684: photosynthesis, light reaction	7.20E-03
67	GO:0009089: lysine biosynthetic process via diaminopimelate	7.20E-03
68	GO:0010015: root morphogenesis	7.20E-03
69	GO:0006913: nucleocytoplasmic transport	7.20E-03
70	GO:0009773: photosynthetic electron transport in photosystem I	7.20E-03
71	GO:0010582: floral meristem determinacy	7.92E-03
72	GO:0010152: pollen maturation	7.92E-03
73	GO:0010628: positive regulation of gene expression	8.66E-03
74	GO:0018107: peptidyl-threonine phosphorylation	8.66E-03
75	GO:0009664: plant-type cell wall organization	8.97E-03
76	GO:0010207: photosystem II assembly	9.42E-03
77	GO:0009934: regulation of meristem structural organization	9.42E-03
78	GO:0006302: double-strand break repair	9.42E-03
79	GO:0048467: gynoecium development	9.42E-03
80	GO:0009933: meristem structural organization	9.42E-03
81	GO:0019853: L-ascorbic acid biosynthetic process	1.02E-02
82	GO:0010030: positive regulation of seed germination	1.02E-02
83	GO:0006863: purine nucleobase transport	1.10E-02
84	GO:0009944: polarity specification of adaxial/abaxial axis	1.19E-02
85	GO:0006874: cellular calcium ion homeostasis	1.27E-02
86	GO:0045454: cell redox homeostasis	1.28E-02
87	GO:0051321: meiotic cell cycle	1.36E-02
88	GO:0048511: rhythmic process	1.36E-02
89	GO:0061077: chaperone-mediated protein folding	1.36E-02
90	GO:0009411: response to UV	1.54E-02
91	GO:0006012: galactose metabolic process	1.54E-02
92	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.54E-02
93	GO:0009306: protein secretion	1.64E-02
94	GO:0048443: stamen development	1.64E-02
95	GO:0006284: base-excision repair	1.64E-02
96	GO:0005975: carbohydrate metabolic process	1.65E-02
97	GO:0006281: DNA repair	1.66E-02
98	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.73E-02
99	GO:0042631: cellular response to water deprivation	1.83E-02
100	GO:0048868: pollen tube development	1.93E-02
101	GO:0046323: glucose import	1.93E-02
102	GO:0009741: response to brassinosteroid	1.93E-02
103	GO:0010154: fruit development	1.93E-02
104	GO:0042752: regulation of circadian rhythm	2.03E-02
105	GO:0009646: response to absence of light	2.03E-02
106	GO:0019252: starch biosynthetic process	2.14E-02
107	GO:0008654: phospholipid biosynthetic process	2.14E-02
108	GO:0010193: response to ozone	2.24E-02
109	GO:0006635: fatty acid beta-oxidation	2.24E-02
110	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	2.24E-02
111	GO:0071554: cell wall organization or biogenesis	2.24E-02
112	GO:0009828: plant-type cell wall loosening	2.57E-02
113	GO:0009607: response to biotic stimulus	3.03E-02
114	GO:0009627: systemic acquired resistance	3.15E-02
115	GO:0010411: xyloglucan metabolic process	3.27E-02
116	GO:0048573: photoperiodism, flowering	3.27E-02
117	GO:0016311: dephosphorylation	3.40E-02
118	GO:0009416: response to light stimulus	3.41E-02
119	GO:0009817: defense response to fungus, incompatible interaction	3.52E-02
120	GO:0009826: unidimensional cell growth	3.55E-02
121	GO:0009658: chloroplast organization	3.68E-02
122	GO:0016310: phosphorylation	3.69E-02
123	GO:0009631: cold acclimation	3.90E-02
124	GO:0080167: response to karrikin	4.56E-02
125	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.71E-02
126	GO:0006631: fatty acid metabolic process	4.71E-02
127	GO:0044550: secondary metabolite biosynthetic process	4.94E-02
128	GO:0009640: photomorphogenesis	4.98E-02
129	GO:0051707: response to other organism	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0004174: electron-transferring-flavoprotein dehydrogenase activity	0.00E+00
2	GO:0010276: phytol kinase activity	0.00E+00
3	GO:0048039: ubiquinone binding	0.00E+00
4	GO:0043783: oxidoreductase activity, oxidizing metal ions with flavin as acceptor	0.00E+00
5	GO:0010349: L-galactose dehydrogenase activity	0.00E+00
6	GO:0042623: ATPase activity, coupled	0.00E+00
7	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	3.66E-05
8	GO:0080030: methyl indole-3-acetate esterase activity	8.60E-05
9	GO:0030570: pectate lyase activity	1.06E-04
10	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	1.19E-04
11	GO:0042736: NADH kinase activity	2.27E-04
12	GO:0005344: oxygen transporter activity	2.27E-04
13	GO:0046920: alpha-(1->3)-fucosyltransferase activity	2.27E-04
14	GO:0004805: trehalose-phosphatase activity	4.18E-04
15	GO:0019156: isoamylase activity	5.05E-04
16	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	5.05E-04
17	GO:0000234: phosphoethanolamine N-methyltransferase activity	5.05E-04
18	GO:0016868: intramolecular transferase activity, phosphotransferases	5.05E-04
19	GO:0090729: toxin activity	8.21E-04
20	GO:0005354: galactose transmembrane transporter activity	1.17E-03
21	GO:0016279: protein-lysine N-methyltransferase activity	1.56E-03
22	GO:0010011: auxin binding	1.56E-03
23	GO:0080032: methyl jasmonate esterase activity	1.56E-03
24	GO:0008725: DNA-3-methyladenine glycosylase activity	1.99E-03
25	GO:0048038: quinone binding	2.33E-03
26	GO:0042578: phosphoric ester hydrolase activity	2.45E-03
27	GO:0004556: alpha-amylase activity	2.45E-03
28	GO:0004462: lactoylglutathione lyase activity	2.45E-03
29	GO:0004605: phosphatidate cytidylyltransferase activity	2.45E-03
30	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	2.94E-03
31	GO:0016829: lyase activity	3.25E-03
32	GO:0004033: aldo-keto reductase (NADP) activity	4.02E-03
33	GO:0003951: NAD+ kinase activity	4.60E-03
34	GO:0030145: manganese ion binding	5.06E-03
35	GO:0008417: fucosyltransferase activity	5.22E-03
36	GO:0015020: glucuronosyltransferase activity	6.51E-03
37	GO:0043621: protein self-association	7.73E-03
38	GO:0016788: hydrolase activity, acting on ester bonds	7.90E-03
39	GO:0004521: endoribonuclease activity	7.92E-03
40	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	8.34E-03
41	GO:0005217: intracellular ligand-gated ion channel activity	1.02E-02
42	GO:0004970: ionotropic glutamate receptor activity	1.02E-02
43	GO:0005528: FK506 binding	1.19E-02
44	GO:0005345: purine nucleobase transmembrane transporter activity	1.27E-02
45	GO:0033612: receptor serine/threonine kinase binding	1.36E-02
46	GO:0008408: 3'-5' exonuclease activity	1.36E-02
47	GO:0015035: protein disulfide oxidoreductase activity	1.42E-02
48	GO:0003727: single-stranded RNA binding	1.64E-02
49	GO:0009055: electron carrier activity	1.82E-02
50	GO:0004252: serine-type endopeptidase activity	1.92E-02
51	GO:0003713: transcription coactivator activity	1.93E-02
52	GO:0005355: glucose transmembrane transporter activity	2.03E-02
53	GO:0016762: xyloglucan:xyloglucosyl transferase activity	2.24E-02
54	GO:0016791: phosphatase activity	2.57E-02
55	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.68E-02
56	GO:0016413: O-acetyltransferase activity	2.80E-02
57	GO:0003824: catalytic activity	3.02E-02
58	GO:0016798: hydrolase activity, acting on glycosyl bonds	3.27E-02
59	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.40E-02
60	GO:0008236: serine-type peptidase activity	3.40E-02
61	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.52E-02
62	GO:0005096: GTPase activator activity	3.65E-02
63	GO:0003993: acid phosphatase activity	4.30E-02
64	GO:0051539: 4 iron, 4 sulfur cluster binding	4.57E-02
65	GO:0004185: serine-type carboxypeptidase activity	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0010368: chloroplast isoamylase complex	0.00E+00
2	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
3	GO:0017133: mitochondrial electron transfer flavoprotein complex	0.00E+00
4	GO:0009535: chloroplast thylakoid membrane	8.96E-09
5	GO:0009507: chloroplast	4.61E-07
6	GO:0009538: photosystem I reaction center	3.94E-06
7	GO:0030095: chloroplast photosystem II	3.55E-05
8	GO:0005787: signal peptidase complex	2.27E-04
9	GO:0000791: euchromatin	2.27E-04
10	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	3.00E-04
11	GO:0009543: chloroplast thylakoid lumen	4.85E-04
12	GO:0030870: Mre11 complex	5.05E-04
13	GO:0000427: plastid-encoded plastid RNA polymerase complex	5.05E-04
14	GO:0009534: chloroplast thylakoid	8.38E-04
15	GO:0009531: secondary cell wall	1.17E-03
16	GO:0000795: synaptonemal complex	1.99E-03
17	GO:0009523: photosystem II	2.18E-03
18	GO:0010287: plastoglobule	2.74E-03
19	GO:0009579: thylakoid	3.19E-03
20	GO:0009533: chloroplast stromal thylakoid	3.47E-03
21	GO:0031305: integral component of mitochondrial inner membrane	4.02E-03
22	GO:0008180: COP9 signalosome	5.22E-03
23	GO:0005740: mitochondrial envelope	6.51E-03
24	GO:0009508: plastid chromosome	8.66E-03
25	GO:0000785: chromatin	2.35E-02
26	GO:0032580: Golgi cisterna membrane	2.57E-02
27	GO:0005778: peroxisomal membrane	2.68E-02
28	GO:0009295: nucleoid	2.68E-02
29	GO:0005667: transcription factor complex	3.15E-02
30	GO:0000151: ubiquitin ligase complex	3.52E-02
31	GO:0019005: SCF ubiquitin ligase complex	3.52E-02
32	GO:0000325: plant-type vacuole	3.90E-02
33	GO:0031969: chloroplast membrane	4.56E-02