co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G64670

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0000740: nuclear membrane fusion	0.00E+00
2	GO:0006412: translation	6.26E-51
3	GO:0042254: ribosome biogenesis	2.43E-10
4	GO:0000027: ribosomal large subunit assembly	2.21E-07
5	GO:0080156: mitochondrial mRNA modification	1.80E-06
6	GO:0000387: spliceosomal snRNP assembly	2.32E-06
7	GO:0006626: protein targeting to mitochondrion	6.58E-06
8	GO:0000028: ribosomal small subunit assembly	7.49E-05
9	GO:0006407: rRNA export from nucleus	1.20E-04
10	GO:0015801: aromatic amino acid transport	1.20E-04
11	GO:0000494: box C/D snoRNA 3'-end processing	1.20E-04
12	GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	1.20E-04
13	GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	1.20E-04
14	GO:1990258: histone glutamine methylation	1.20E-04
15	GO:0045041: protein import into mitochondrial intermembrane space	2.77E-04
16	GO:0010198: synergid death	2.77E-04
17	GO:0030150: protein import into mitochondrial matrix	4.09E-04
18	GO:1902626: assembly of large subunit precursor of preribosome	4.58E-04
19	GO:0042256: mature ribosome assembly	4.58E-04
20	GO:0009558: embryo sac cellularization	6.57E-04
21	GO:0051085: chaperone mediated protein folding requiring cofactor	6.57E-04
22	GO:0006164: purine nucleotide biosynthetic process	6.57E-04
23	GO:0010197: polar nucleus fusion	8.00E-04
24	GO:0009165: nucleotide biosynthetic process	8.72E-04
25	GO:1900864: mitochondrial RNA modification	8.72E-04
26	GO:0006414: translational elongation	9.60E-04
27	GO:0031167: rRNA methylation	1.10E-03
28	GO:0045040: protein import into mitochondrial outer membrane	1.35E-03
29	GO:0000741: karyogamy	1.35E-03
30	GO:0006458: 'de novo' protein folding	1.61E-03
31	GO:0000245: spliceosomal complex assembly	1.61E-03
32	GO:0042026: protein refolding	1.61E-03
33	GO:0009735: response to cytokinin	2.03E-03
34	GO:0001510: RNA methylation	2.50E-03
35	GO:0009409: response to cold	2.78E-03
36	GO:0006189: 'de novo' IMP biosynthetic process	2.82E-03
37	GO:0007338: single fertilization	2.82E-03
38	GO:0009651: response to salt stress	4.19E-03
39	GO:0006820: anion transport	4.26E-03
40	GO:0010102: lateral root morphogenesis	4.64E-03
41	GO:0009553: embryo sac development	5.42E-03
42	GO:0009116: nucleoside metabolic process	6.32E-03
43	GO:0000398: mRNA splicing, via spliceosome	6.44E-03
44	GO:0003333: amino acid transmembrane transport	7.22E-03
45	GO:0061077: chaperone-mediated protein folding	7.22E-03
46	GO:0007005: mitochondrion organization	7.69E-03
47	GO:0008033: tRNA processing	9.68E-03
48	GO:0000413: protein peptidyl-prolyl isomerization	9.68E-03
49	GO:0015031: protein transport	9.75E-03
50	GO:0006635: fatty acid beta-oxidation	1.18E-02
51	GO:0009567: double fertilization forming a zygote and endosperm	1.36E-02
52	GO:0006970: response to osmotic stress	1.61E-02
53	GO:0006811: ion transport	1.99E-02
54	GO:0006865: amino acid transport	2.12E-02
55	GO:0008283: cell proliferation	2.63E-02
56	GO:0009644: response to high light intensity	2.78E-02
57	GO:0009965: leaf morphogenesis	2.85E-02
58	GO:0006364: rRNA processing	3.25E-02

Rank	GO Term	Adjusted P value
1	GO:0004641: phosphoribosylformylglycinamidine cyclo-ligase activity	0.00E+00
2	GO:0003735: structural constituent of ribosome	7.01E-70
3	GO:0003729: mRNA binding	3.66E-22
4	GO:0019843: rRNA binding	9.81E-09
5	GO:1990259: histone-glutamine methyltransferase activity	1.20E-04
6	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.60E-04
7	GO:0015266: protein channel activity	2.59E-04
8	GO:0015173: aromatic amino acid transmembrane transporter activity	2.77E-04
9	GO:0003723: RNA binding	2.98E-04
10	GO:0008649: rRNA methyltransferase activity	4.58E-04
11	GO:0008097: 5S rRNA binding	6.57E-04
12	GO:0004749: ribose phosphate diphosphokinase activity	6.57E-04
13	GO:0005275: amine transmembrane transporter activity	1.10E-03
14	GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity	1.35E-03
15	GO:0030515: snoRNA binding	1.89E-03
16	GO:0015288: porin activity	2.19E-03
17	GO:0003697: single-stranded DNA binding	2.28E-03
18	GO:0008308: voltage-gated anion channel activity	2.50E-03
19	GO:0001055: RNA polymerase II activity	3.16E-03
20	GO:0001054: RNA polymerase I activity	3.88E-03
21	GO:0044183: protein binding involved in protein folding	3.88E-03
22	GO:0001056: RNA polymerase III activity	4.26E-03
23	GO:0031072: heat shock protein binding	4.64E-03
24	GO:0051082: unfolded protein binding	5.58E-03
25	GO:0004812: aminoacyl-tRNA ligase activity	9.17E-03
26	GO:0003746: translation elongation factor activity	2.19E-02
27	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.93E-02
28	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	3.25E-02
29	GO:0003690: double-stranded DNA binding	3.33E-02

Rank	GO Term	Adjusted P value
1	GO:0043186: P granule	0.00E+00
2	GO:0022626: cytosolic ribosome	1.24E-47
3	GO:0005840: ribosome	6.72E-42
4	GO:0022625: cytosolic large ribosomal subunit	1.48E-35
5	GO:0022627: cytosolic small ribosomal subunit	2.24E-22
6	GO:0005829: cytosol	4.50E-12
7	GO:0005730: nucleolus	3.47E-11
8	GO:0005774: vacuolar membrane	3.11E-10
9	GO:0005737: cytoplasm	2.78E-09
10	GO:0015934: large ribosomal subunit	5.84E-09
11	GO:0016020: membrane	6.29E-08
12	GO:0015935: small ribosomal subunit	3.51E-07
13	GO:0009506: plasmodesma	1.70E-06
14	GO:0034719: SMN-Sm protein complex	2.75E-06
15	GO:0005739: mitochondrion	4.15E-06
16	GO:0005682: U5 snRNP	1.22E-05
17	GO:0005687: U4 snRNP	2.01E-05
18	GO:0097526: spliceosomal tri-snRNP complex	2.01E-05
19	GO:0005689: U12-type spliceosomal complex	4.28E-05
20	GO:0005742: mitochondrial outer membrane translocase complex	9.46E-05
21	GO:0005685: U1 snRNP	1.17E-04
22	GO:0030686: 90S preribosome	1.20E-04
23	GO:0071011: precatalytic spliceosome	1.41E-04
24	GO:0005686: U2 snRNP	1.67E-04
25	GO:0071013: catalytic step 2 spliceosome	1.96E-04
26	GO:0048471: perinuclear region of cytoplasm	1.96E-04
27	GO:0019013: viral nucleocapsid	2.59E-04
28	GO:0071010: prespliceosome	2.77E-04
29	GO:0034715: pICln-Sm protein complex	4.58E-04
30	GO:0005732: small nucleolar ribonucleoprotein complex	8.04E-04
31	GO:0031428: box C/D snoRNP complex	1.35E-03
32	GO:0000243: commitment complex	1.35E-03
33	GO:0005762: mitochondrial large ribosomal subunit	1.61E-03
34	GO:0071004: U2-type prespliceosome	2.19E-03
35	GO:0046930: pore complex	2.50E-03
36	GO:0005763: mitochondrial small ribosomal subunit	2.82E-03
37	GO:0005736: DNA-directed RNA polymerase I complex	2.82E-03
38	GO:0005666: DNA-directed RNA polymerase III complex	3.16E-03
39	GO:0015030: Cajal body	3.16E-03
40	GO:0016604: nuclear body	3.16E-03
41	GO:0005773: vacuole	3.40E-03
42	GO:0000418: DNA-directed RNA polymerase IV complex	3.51E-03
43	GO:0031307: integral component of mitochondrial outer membrane	4.26E-03
44	GO:0032040: small-subunit processome	4.26E-03
45	GO:0005665: DNA-directed RNA polymerase II, core complex	4.26E-03
46	GO:0005618: cell wall	5.80E-03
47	GO:0000419: DNA-directed RNA polymerase V complex	5.88E-03
48	GO:0005758: mitochondrial intermembrane space	6.32E-03
49	GO:0005741: mitochondrial outer membrane	7.22E-03
50	GO:0005886: plasma membrane	1.14E-02
51	GO:0009507: chloroplast	1.48E-02
52	GO:0005743: mitochondrial inner membrane	2.55E-02
53	GO:0005681: spliceosomal complex	3.66E-02
54	GO:0005747: mitochondrial respiratory chain complex I	3.74E-02
55	GO:0009706: chloroplast inner membrane	4.17E-02