Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G64420

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0080180: 2-methylguanosine metabolic process0.00E+00
2GO:0090070: positive regulation of ribosome biogenesis0.00E+00
3GO:0039694: viral RNA genome replication0.00E+00
4GO:0071426: ribonucleoprotein complex export from nucleus0.00E+00
5GO:0006364: rRNA processing1.08E-07
6GO:0006405: RNA export from nucleus5.68E-06
7GO:0006606: protein import into nucleus7.75E-06
8GO:0009451: RNA modification3.17E-05
9GO:0036228: protein targeting to nuclear inner membrane5.64E-05
10GO:0000469: cleavage involved in rRNA processing5.64E-05
11GO:0030490: maturation of SSU-rRNA5.64E-05
12GO:0010930: negative regulation of auxin mediated signaling pathway5.64E-05
13GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic5.64E-05
14GO:1902182: shoot apical meristem development5.64E-05
15GO:0000972: transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery5.64E-05
16GO:0042254: ribosome biogenesis7.20E-05
17GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)1.37E-04
18GO:0006421: asparaginyl-tRNA aminoacylation2.34E-04
19GO:0042780: tRNA 3'-end processing2.34E-04
20GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic2.34E-04
21GO:0045604: regulation of epidermal cell differentiation2.34E-04
22GO:0009793: embryo development ending in seed dormancy2.55E-04
23GO:0010501: RNA secondary structure unwinding2.80E-04
24GO:0007276: gamete generation3.41E-04
25GO:0048825: cotyledon development3.49E-04
26GO:0046345: abscisic acid catabolic process4.56E-04
27GO:0016973: poly(A)+ mRNA export from nucleus5.78E-04
28GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)8.44E-04
29GO:0048444: floral organ morphogenesis8.44E-04
30GO:0010077: maintenance of inflorescence meristem identity8.44E-04
31GO:0006400: tRNA modification9.85E-04
32GO:0045995: regulation of embryonic development9.85E-04
33GO:0001522: pseudouridine synthesis1.13E-03
34GO:0019827: stem cell population maintenance1.13E-03
35GO:0042255: ribosome assembly1.13E-03
36GO:0006997: nucleus organization1.29E-03
37GO:0009880: embryonic pattern specification1.29E-03
38GO:0032259: methylation1.40E-03
39GO:2000024: regulation of leaf development1.45E-03
40GO:0001708: cell fate specification1.45E-03
41GO:0006349: regulation of gene expression by genetic imprinting1.62E-03
42GO:0006913: nucleocytoplasmic transport1.97E-03
43GO:0010582: floral meristem determinacy2.16E-03
44GO:2000012: regulation of auxin polar transport2.36E-03
45GO:0009790: embryo development3.01E-03
46GO:0051301: cell division3.40E-03
47GO:0051302: regulation of cell division3.40E-03
48GO:0051028: mRNA transport4.58E-03
49GO:0006342: chromatin silencing5.09E-03
50GO:0009960: endosperm development5.09E-03
51GO:0010305: leaf vascular tissue pattern formation5.09E-03
52GO:0080156: mitochondrial mRNA modification5.88E-03
53GO:0048366: leaf development6.43E-03
54GO:0000910: cytokinesis7.29E-03
55GO:0009926: auxin polar transport1.29E-02
56GO:0009909: regulation of flower development1.71E-02
57GO:0006417: regulation of translation1.71E-02
58GO:0016569: covalent chromatin modification1.96E-02
59GO:0009553: embryo sac development2.00E-02
60GO:0008380: RNA splicing3.42E-02
RankGO TermAdjusted P value
1GO:0000166: nucleotide binding4.37E-10
2GO:0003723: RNA binding7.46E-09
3GO:0004004: ATP-dependent RNA helicase activity6.50E-07
4GO:0008026: ATP-dependent helicase activity1.13E-05
5GO:0004519: endonuclease activity2.07E-05
6GO:0017056: structural constituent of nuclear pore2.31E-05
7GO:0005487: nucleocytoplasmic transporter activity4.56E-05
8GO:0016274: protein-arginine N-methyltransferase activity5.64E-05
9GO:0016891: endoribonuclease activity, producing 5'-phosphomonoesters1.37E-04
10GO:0043021: ribonucleoprotein complex binding1.37E-04
11GO:0004816: asparagine-tRNA ligase activity2.34E-04
12GO:0042781: 3'-tRNA processing endoribonuclease activity2.34E-04
13GO:0008168: methyltransferase activity6.70E-04
14GO:0030515: snoRNA binding9.85E-04
15GO:0043022: ribosome binding1.13E-03
16GO:0005543: phospholipid binding1.97E-03
17GO:0001054: RNA polymerase I activity1.97E-03
18GO:0004521: endoribonuclease activity2.16E-03
19GO:0043130: ubiquitin binding3.18E-03
20GO:0005525: GTP binding5.73E-03
21GO:0005096: GTPase activator activity9.45E-03
22GO:0042393: histone binding1.18E-02
23GO:0003729: mRNA binding1.24E-02
24GO:0003899: DNA-directed 5'-3' RNA polymerase activity1.59E-02
25GO:0016787: hydrolase activity1.96E-02
26GO:0004386: helicase activity2.18E-02
RankGO TermAdjusted P value
1GO:0034455: t-UTP complex0.00E+00
2GO:0030688: preribosome, small subunit precursor0.00E+00
3GO:0019034: viral replication complex0.00E+00
4GO:0032153: cell division site0.00E+00
5GO:0005730: nucleolus6.02E-09
6GO:0005634: nucleus6.33E-09
7GO:0034399: nuclear periphery2.31E-05
8GO:0034388: Pwp2p-containing subcomplex of 90S preribosome5.64E-05
9GO:0044611: nuclear pore inner ring5.64E-05
10GO:0005635: nuclear envelope1.31E-04
11GO:0044613: nuclear pore central transport channel1.37E-04
12GO:0070545: PeBoW complex1.37E-04
13GO:0005643: nuclear pore6.92E-04
14GO:0080008: Cul4-RING E3 ubiquitin ligase complex7.88E-04
15GO:0030687: preribosome, large subunit precursor9.85E-04
16GO:0005736: DNA-directed RNA polymerase I complex1.45E-03
17GO:0005829: cytosol1.72E-03
18GO:0032040: small-subunit processome2.16E-03
19GO:0043234: protein complex2.97E-03
20GO:0009504: cell plate5.61E-03
21GO:0031965: nuclear membrane5.61E-03
22GO:0005819: spindle1.15E-02
23GO:0005739: mitochondrion1.76E-02
24GO:0005834: heterotrimeric G-protein complex1.88E-02
25GO:0009506: plasmodesma2.46E-02
26GO:0009524: phragmoplast2.49E-02
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Gene type



Gene DE type