GO Enrichment Analysis of Co-expressed Genes with
AT5G63500
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046460: neutral lipid biosynthetic process | 0.00E+00 |
| 2 | GO:0018316: peptide cross-linking via L-cystine | 0.00E+00 |
| 3 | GO:0009304: tRNA transcription | 0.00E+00 |
| 4 | GO:0080005: photosystem stoichiometry adjustment | 1.89E-06 |
| 5 | GO:0010190: cytochrome b6f complex assembly | 6.98E-05 |
| 6 | GO:0071806: protein transmembrane transport | 2.00E-04 |
| 7 | GO:0042371: vitamin K biosynthetic process | 2.00E-04 |
| 8 | GO:0071454: cellular response to anoxia | 2.00E-04 |
| 9 | GO:0071461: cellular response to redox state | 2.00E-04 |
| 10 | GO:0009658: chloroplast organization | 2.00E-04 |
| 11 | GO:0010362: negative regulation of anion channel activity by blue light | 2.00E-04 |
| 12 | GO:0015995: chlorophyll biosynthetic process | 3.65E-04 |
| 13 | GO:0007154: cell communication | 4.48E-04 |
| 14 | GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation | 4.48E-04 |
| 15 | GO:0000256: allantoin catabolic process | 4.48E-04 |
| 16 | GO:0080153: negative regulation of reductive pentose-phosphate cycle | 4.48E-04 |
| 17 | GO:0080185: effector dependent induction by symbiont of host immune response | 4.48E-04 |
| 18 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 4.48E-04 |
| 19 | GO:0009767: photosynthetic electron transport chain | 5.25E-04 |
| 20 | GO:0010136: ureide catabolic process | 7.29E-04 |
| 21 | GO:0009150: purine ribonucleotide metabolic process | 7.29E-04 |
| 22 | GO:0006696: ergosterol biosynthetic process | 7.29E-04 |
| 23 | GO:0006760: folic acid-containing compound metabolic process | 7.29E-04 |
| 24 | GO:0006071: glycerol metabolic process | 7.36E-04 |
| 25 | GO:0051415: interphase microtubule nucleation by interphase microtubule organizing center | 1.04E-03 |
| 26 | GO:0033014: tetrapyrrole biosynthetic process | 1.04E-03 |
| 27 | GO:0050482: arachidonic acid secretion | 1.04E-03 |
| 28 | GO:2001141: regulation of RNA biosynthetic process | 1.04E-03 |
| 29 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.04E-03 |
| 30 | GO:0090307: mitotic spindle assembly | 1.04E-03 |
| 31 | GO:0006145: purine nucleobase catabolic process | 1.04E-03 |
| 32 | GO:0016117: carotenoid biosynthetic process | 1.36E-03 |
| 33 | GO:0031122: cytoplasmic microtubule organization | 1.38E-03 |
| 34 | GO:0046656: folic acid biosynthetic process | 1.38E-03 |
| 35 | GO:0009902: chloroplast relocation | 1.38E-03 |
| 36 | GO:0042274: ribosomal small subunit biogenesis | 1.38E-03 |
| 37 | GO:0016120: carotene biosynthetic process | 1.76E-03 |
| 38 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.76E-03 |
| 39 | GO:0035434: copper ion transmembrane transport | 1.76E-03 |
| 40 | GO:0000741: karyogamy | 2.17E-03 |
| 41 | GO:0006555: methionine metabolic process | 2.17E-03 |
| 42 | GO:0046654: tetrahydrofolate biosynthetic process | 2.60E-03 |
| 43 | GO:0010019: chloroplast-nucleus signaling pathway | 2.60E-03 |
| 44 | GO:0019509: L-methionine salvage from methylthioadenosine | 2.60E-03 |
| 45 | GO:0034389: lipid particle organization | 2.60E-03 |
| 46 | GO:0009772: photosynthetic electron transport in photosystem II | 3.06E-03 |
| 47 | GO:1900056: negative regulation of leaf senescence | 3.06E-03 |
| 48 | GO:0006605: protein targeting | 3.55E-03 |
| 49 | GO:0009704: de-etiolation | 3.55E-03 |
| 50 | GO:0006644: phospholipid metabolic process | 3.55E-03 |
| 51 | GO:0048564: photosystem I assembly | 3.55E-03 |
| 52 | GO:0018298: protein-chromophore linkage | 3.65E-03 |
| 53 | GO:0071482: cellular response to light stimulus | 4.06E-03 |
| 54 | GO:0022900: electron transport chain | 4.06E-03 |
| 55 | GO:0009821: alkaloid biosynthetic process | 4.60E-03 |
| 56 | GO:0046916: cellular transition metal ion homeostasis | 4.60E-03 |
| 57 | GO:0006783: heme biosynthetic process | 4.60E-03 |
| 58 | GO:0000373: Group II intron splicing | 4.60E-03 |
| 59 | GO:0019432: triglyceride biosynthetic process | 4.60E-03 |
| 60 | GO:1900426: positive regulation of defense response to bacterium | 5.15E-03 |
| 61 | GO:0009638: phototropism | 5.15E-03 |
| 62 | GO:0006779: porphyrin-containing compound biosynthetic process | 5.15E-03 |
| 63 | GO:0009098: leucine biosynthetic process | 5.15E-03 |
| 64 | GO:0010380: regulation of chlorophyll biosynthetic process | 5.15E-03 |
| 65 | GO:0045036: protein targeting to chloroplast | 5.74E-03 |
| 66 | GO:0051555: flavonol biosynthetic process | 5.74E-03 |
| 67 | GO:0009744: response to sucrose | 5.94E-03 |
| 68 | GO:0043085: positive regulation of catalytic activity | 6.34E-03 |
| 69 | GO:0006352: DNA-templated transcription, initiation | 6.34E-03 |
| 70 | GO:0009773: photosynthetic electron transport in photosystem I | 6.34E-03 |
| 71 | GO:0009644: response to high light intensity | 6.43E-03 |
| 72 | GO:0006790: sulfur compound metabolic process | 6.96E-03 |
| 73 | GO:0009725: response to hormone | 7.61E-03 |
| 74 | GO:0019253: reductive pentose-phosphate cycle | 8.28E-03 |
| 75 | GO:0010207: photosystem II assembly | 8.28E-03 |
| 76 | GO:0034605: cellular response to heat | 8.28E-03 |
| 77 | GO:0090351: seedling development | 8.97E-03 |
| 78 | GO:0015979: photosynthesis | 9.49E-03 |
| 79 | GO:0006289: nucleotide-excision repair | 1.04E-02 |
| 80 | GO:0007017: microtubule-based process | 1.12E-02 |
| 81 | GO:0006825: copper ion transport | 1.12E-02 |
| 82 | GO:0006810: transport | 1.13E-02 |
| 83 | GO:0016226: iron-sulfur cluster assembly | 1.27E-02 |
| 84 | GO:0080092: regulation of pollen tube growth | 1.27E-02 |
| 85 | GO:0009306: protein secretion | 1.43E-02 |
| 86 | GO:0070417: cellular response to cold | 1.52E-02 |
| 87 | GO:0010118: stomatal movement | 1.60E-02 |
| 88 | GO:0010197: polar nucleus fusion | 1.69E-02 |
| 89 | GO:0015986: ATP synthesis coupled proton transport | 1.78E-02 |
| 90 | GO:0009791: post-embryonic development | 1.87E-02 |
| 91 | GO:0007623: circadian rhythm | 1.98E-02 |
| 92 | GO:0019761: glucosinolate biosynthetic process | 2.06E-02 |
| 93 | GO:0007264: small GTPase mediated signal transduction | 2.06E-02 |
| 94 | GO:0030163: protein catabolic process | 2.16E-02 |
| 95 | GO:0009735: response to cytokinin | 2.43E-02 |
| 96 | GO:0016126: sterol biosynthetic process | 2.55E-02 |
| 97 | GO:0009816: defense response to bacterium, incompatible interaction | 2.66E-02 |
| 98 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 2.66E-02 |
| 99 | GO:0006950: response to stress | 2.87E-02 |
| 100 | GO:0000160: phosphorelay signal transduction system | 3.20E-02 |
| 101 | GO:0006811: ion transport | 3.31E-02 |
| 102 | GO:0010043: response to zinc ion | 3.42E-02 |
| 103 | GO:0007568: aging | 3.42E-02 |
| 104 | GO:0009910: negative regulation of flower development | 3.42E-02 |
| 105 | GO:0009637: response to blue light | 3.65E-02 |
| 106 | GO:0006508: proteolysis | 3.93E-02 |
| 107 | GO:0030001: metal ion transport | 4.01E-02 |
| 108 | GO:0046777: protein autophosphorylation | 4.06E-02 |
| 109 | GO:0055114: oxidation-reduction process | 4.22E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity | 0.00E+00 |
| 2 | GO:0046905: phytoene synthase activity | 0.00E+00 |
| 3 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 4 | GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity | 0.00E+00 |
| 5 | GO:0045436: lycopene beta cyclase activity | 0.00E+00 |
| 6 | GO:0004848: ureidoglycolate hydrolase activity | 1.03E-08 |
| 7 | GO:0016851: magnesium chelatase activity | 1.60E-05 |
| 8 | GO:0048038: quinone binding | 1.77E-04 |
| 9 | GO:0004325: ferrochelatase activity | 2.00E-04 |
| 10 | GO:0051996: squalene synthase activity | 2.00E-04 |
| 11 | GO:0030941: chloroplast targeting sequence binding | 2.00E-04 |
| 12 | GO:0046906: tetrapyrrole binding | 2.00E-04 |
| 13 | GO:0004046: aminoacylase activity | 4.48E-04 |
| 14 | GO:0004150: dihydroneopterin aldolase activity | 4.48E-04 |
| 15 | GO:0004310: farnesyl-diphosphate farnesyltransferase activity | 4.48E-04 |
| 16 | GO:0003862: 3-isopropylmalate dehydrogenase activity | 4.48E-04 |
| 17 | GO:0102083: 7,8-dihydromonapterin aldolase activity | 4.48E-04 |
| 18 | GO:0004180: carboxypeptidase activity | 7.29E-04 |
| 19 | GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity | 7.29E-04 |
| 20 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 7.29E-04 |
| 21 | GO:0032947: protein complex scaffold | 7.29E-04 |
| 22 | GO:0016491: oxidoreductase activity | 7.95E-04 |
| 23 | GO:0009882: blue light photoreceptor activity | 1.04E-03 |
| 24 | GO:0047627: adenylylsulfatase activity | 1.04E-03 |
| 25 | GO:0000254: C-4 methylsterol oxidase activity | 1.04E-03 |
| 26 | GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 1.38E-03 |
| 27 | GO:0001053: plastid sigma factor activity | 1.38E-03 |
| 28 | GO:0051861: glycolipid binding | 1.38E-03 |
| 29 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.38E-03 |
| 30 | GO:0016987: sigma factor activity | 1.38E-03 |
| 31 | GO:0043015: gamma-tubulin binding | 1.38E-03 |
| 32 | GO:0005506: iron ion binding | 1.55E-03 |
| 33 | GO:0004623: phospholipase A2 activity | 1.76E-03 |
| 34 | GO:0051011: microtubule minus-end binding | 1.76E-03 |
| 35 | GO:0000293: ferric-chelate reductase activity | 2.17E-03 |
| 36 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 2.41E-03 |
| 37 | GO:0008237: metallopeptidase activity | 2.50E-03 |
| 38 | GO:0004144: diacylglycerol O-acyltransferase activity | 2.60E-03 |
| 39 | GO:0015631: tubulin binding | 2.60E-03 |
| 40 | GO:0019899: enzyme binding | 3.06E-03 |
| 41 | GO:0016621: cinnamoyl-CoA reductase activity | 3.06E-03 |
| 42 | GO:0005375: copper ion transmembrane transporter activity | 4.06E-03 |
| 43 | GO:0046914: transition metal ion binding | 4.06E-03 |
| 44 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 4.60E-03 |
| 45 | GO:0016844: strictosidine synthase activity | 5.15E-03 |
| 46 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 6.34E-03 |
| 47 | GO:0001054: RNA polymerase I activity | 6.34E-03 |
| 48 | GO:0051537: 2 iron, 2 sulfur cluster binding | 6.43E-03 |
| 49 | GO:0001056: RNA polymerase III activity | 6.96E-03 |
| 50 | GO:0031072: heat shock protein binding | 7.61E-03 |
| 51 | GO:0000155: phosphorelay sensor kinase activity | 7.61E-03 |
| 52 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 8.01E-03 |
| 53 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 8.28E-03 |
| 54 | GO:0003887: DNA-directed DNA polymerase activity | 9.68E-03 |
| 55 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 9.79E-03 |
| 56 | GO:0051536: iron-sulfur cluster binding | 1.04E-02 |
| 57 | GO:0004176: ATP-dependent peptidase activity | 1.19E-02 |
| 58 | GO:0022891: substrate-specific transmembrane transporter activity | 1.35E-02 |
| 59 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 1.69E-02 |
| 60 | GO:0008080: N-acetyltransferase activity | 1.69E-02 |
| 61 | GO:0010181: FMN binding | 1.78E-02 |
| 62 | GO:0050662: coenzyme binding | 1.78E-02 |
| 63 | GO:0004872: receptor activity | 1.87E-02 |
| 64 | GO:0004518: nuclease activity | 2.06E-02 |
| 65 | GO:0005200: structural constituent of cytoskeleton | 2.35E-02 |
| 66 | GO:0008483: transaminase activity | 2.35E-02 |
| 67 | GO:0042802: identical protein binding | 2.52E-02 |
| 68 | GO:0016168: chlorophyll binding | 2.66E-02 |
| 69 | GO:0030247: polysaccharide binding | 2.87E-02 |
| 70 | GO:0008236: serine-type peptidase activity | 2.98E-02 |
| 71 | GO:0016788: hydrolase activity, acting on ester bonds | 3.13E-02 |
| 72 | GO:0004222: metalloendopeptidase activity | 3.31E-02 |
| 73 | GO:0016740: transferase activity | 3.47E-02 |
| 74 | GO:0004185: serine-type carboxypeptidase activity | 4.37E-02 |
| 75 | GO:0005198: structural molecule activity | 4.75E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 2.50E-26 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 6.71E-17 |
| 3 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 5.88E-06 |
| 4 | GO:0009570: chloroplast stroma | 1.78E-04 |
| 5 | GO:0031969: chloroplast membrane | 3.04E-04 |
| 6 | GO:0080085: signal recognition particle, chloroplast targeting | 4.48E-04 |
| 7 | GO:0008274: gamma-tubulin ring complex | 4.48E-04 |
| 8 | GO:0033281: TAT protein transport complex | 7.29E-04 |
| 9 | GO:0009528: plastid inner membrane | 7.29E-04 |
| 10 | GO:0010007: magnesium chelatase complex | 7.29E-04 |
| 11 | GO:0042651: thylakoid membrane | 8.95E-04 |
| 12 | GO:0000923: equatorial microtubule organizing center | 1.04E-03 |
| 13 | GO:0030286: dynein complex | 1.38E-03 |
| 14 | GO:0055035: plastid thylakoid membrane | 1.76E-03 |
| 15 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 2.17E-03 |
| 16 | GO:0009534: chloroplast thylakoid | 2.34E-03 |
| 17 | GO:0009840: chloroplastic endopeptidase Clp complex | 2.60E-03 |
| 18 | GO:0031359: integral component of chloroplast outer membrane | 3.06E-03 |
| 19 | GO:0009707: chloroplast outer membrane | 3.65E-03 |
| 20 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 4.06E-03 |
| 21 | GO:0005811: lipid particle | 4.06E-03 |
| 22 | GO:0000922: spindle pole | 4.60E-03 |
| 23 | GO:0005736: DNA-directed RNA polymerase I complex | 4.60E-03 |
| 24 | GO:0005666: DNA-directed RNA polymerase III complex | 5.15E-03 |
| 25 | GO:0016324: apical plasma membrane | 5.74E-03 |
| 26 | GO:0043234: protein complex | 9.68E-03 |
| 27 | GO:0005875: microtubule associated complex | 9.68E-03 |
| 28 | GO:0015935: small ribosomal subunit | 1.19E-02 |
| 29 | GO:0009941: chloroplast envelope | 1.25E-02 |
| 30 | GO:0010287: plastoglobule | 1.36E-02 |
| 31 | GO:0009543: chloroplast thylakoid lumen | 1.43E-02 |
| 32 | GO:0009523: photosystem II | 1.87E-02 |
| 33 | GO:0010319: stromule | 2.35E-02 |
| 34 | GO:0005777: peroxisome | 3.22E-02 |