GO Enrichment Analysis of Co-expressed Genes with
AT5G63100
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009715: chalcone biosynthetic process | 0.00E+00 |
| 2 | GO:0046838: phosphorylated carbohydrate dephosphorylation | 0.00E+00 |
| 3 | GO:0006114: glycerol biosynthetic process | 0.00E+00 |
| 4 | GO:0043686: co-translational protein modification | 3.64E-05 |
| 5 | GO:0000476: maturation of 4.5S rRNA | 3.64E-05 |
| 6 | GO:0000967: rRNA 5'-end processing | 3.64E-05 |
| 7 | GO:0034470: ncRNA processing | 9.09E-05 |
| 8 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 9.09E-05 |
| 9 | GO:0009629: response to gravity | 9.09E-05 |
| 10 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 2.33E-04 |
| 11 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 2.33E-04 |
| 12 | GO:0010027: thylakoid membrane organization | 3.08E-04 |
| 13 | GO:0015995: chlorophyll biosynthetic process | 3.63E-04 |
| 14 | GO:0016311: dephosphorylation | 3.83E-04 |
| 15 | GO:0031365: N-terminal protein amino acid modification | 4.01E-04 |
| 16 | GO:0009813: flavonoid biosynthetic process | 4.22E-04 |
| 17 | GO:0042549: photosystem II stabilization | 4.92E-04 |
| 18 | GO:0015979: photosynthesis | 5.34E-04 |
| 19 | GO:0031540: regulation of anthocyanin biosynthetic process | 7.90E-04 |
| 20 | GO:0000105: histidine biosynthetic process | 7.90E-04 |
| 21 | GO:0017004: cytochrome complex assembly | 8.97E-04 |
| 22 | GO:0032544: plastid translation | 8.97E-04 |
| 23 | GO:0006779: porphyrin-containing compound biosynthetic process | 1.12E-03 |
| 24 | GO:0006782: protoporphyrinogen IX biosynthetic process | 1.24E-03 |
| 25 | GO:0019684: photosynthesis, light reaction | 1.36E-03 |
| 26 | GO:0009089: lysine biosynthetic process via diaminopimelate | 1.36E-03 |
| 27 | GO:0005983: starch catabolic process | 1.49E-03 |
| 28 | GO:0019853: L-ascorbic acid biosynthetic process | 1.89E-03 |
| 29 | GO:0000162: tryptophan biosynthetic process | 2.04E-03 |
| 30 | GO:0009768: photosynthesis, light harvesting in photosystem I | 2.33E-03 |
| 31 | GO:0071369: cellular response to ethylene stimulus | 2.80E-03 |
| 32 | GO:0006012: galactose metabolic process | 2.80E-03 |
| 33 | GO:0009561: megagametogenesis | 2.96E-03 |
| 34 | GO:0009658: chloroplast organization | 3.13E-03 |
| 35 | GO:0000413: protein peptidyl-prolyl isomerization | 3.30E-03 |
| 36 | GO:0071554: cell wall organization or biogenesis | 4.00E-03 |
| 37 | GO:0032259: methylation | 5.45E-03 |
| 38 | GO:0018298: protein-chromophore linkage | 6.18E-03 |
| 39 | GO:0010218: response to far red light | 6.61E-03 |
| 40 | GO:0009637: response to blue light | 7.28E-03 |
| 41 | GO:0006631: fatty acid metabolic process | 8.21E-03 |
| 42 | GO:0010114: response to red light | 8.68E-03 |
| 43 | GO:0009926: auxin polar transport | 8.68E-03 |
| 44 | GO:0006364: rRNA processing | 1.07E-02 |
| 45 | GO:0010224: response to UV-B | 1.10E-02 |
| 46 | GO:0006096: glycolytic process | 1.20E-02 |
| 47 | GO:0006457: protein folding | 1.31E-02 |
| 48 | GO:0009790: embryo development | 1.80E-02 |
| 49 | GO:0006470: protein dephosphorylation | 2.23E-02 |
| 50 | GO:0042254: ribosome biogenesis | 2.80E-02 |
| 51 | GO:0006412: translation | 2.93E-02 |
| 52 | GO:0045454: cell redox homeostasis | 3.66E-02 |
| 53 | GO:0016042: lipid catabolic process | 4.16E-02 |
| 54 | GO:0009753: response to jasmonic acid | 4.46E-02 |
| 55 | GO:0009793: embryo development ending in seed dormancy | 4.73E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity | 0.00E+00 |
| 2 | GO:0043136: glycerol-3-phosphatase activity | 0.00E+00 |
| 3 | GO:0000121: glycerol-1-phosphatase activity | 0.00E+00 |
| 4 | GO:0010349: L-galactose dehydrogenase activity | 0.00E+00 |
| 5 | GO:0016210: naringenin-chalcone synthase activity | 0.00E+00 |
| 6 | GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity | 3.64E-05 |
| 7 | GO:0050308: sugar-phosphatase activity | 3.64E-05 |
| 8 | GO:0042586: peptide deformylase activity | 3.64E-05 |
| 9 | GO:0019203: carbohydrate phosphatase activity | 3.64E-05 |
| 10 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 9.09E-05 |
| 11 | GO:0005504: fatty acid binding | 1.58E-04 |
| 12 | GO:0004751: ribose-5-phosphate isomerase activity | 1.58E-04 |
| 13 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 2.33E-04 |
| 14 | GO:0016851: magnesium chelatase activity | 2.33E-04 |
| 15 | GO:0080032: methyl jasmonate esterase activity | 3.14E-04 |
| 16 | GO:0045430: chalcone isomerase activity | 3.14E-04 |
| 17 | GO:2001070: starch binding | 4.92E-04 |
| 18 | GO:0080030: methyl indole-3-acetate esterase activity | 4.92E-04 |
| 19 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 7.50E-04 |
| 20 | GO:0004033: aldo-keto reductase (NADP) activity | 7.90E-04 |
| 21 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 1.01E-03 |
| 22 | GO:0019843: rRNA binding | 1.49E-03 |
| 23 | GO:0031072: heat shock protein binding | 1.62E-03 |
| 24 | GO:0031409: pigment binding | 2.04E-03 |
| 25 | GO:0043424: protein histidine kinase binding | 2.33E-03 |
| 26 | GO:0008168: methyltransferase activity | 3.01E-03 |
| 27 | GO:0016788: hydrolase activity, acting on ester bonds | 3.19E-03 |
| 28 | GO:0008483: transaminase activity | 4.75E-03 |
| 29 | GO:0016413: O-acetyltransferase activity | 4.95E-03 |
| 30 | GO:0016168: chlorophyll binding | 5.35E-03 |
| 31 | GO:0003993: acid phosphatase activity | 7.51E-03 |
| 32 | GO:0051082: unfolded protein binding | 1.37E-02 |
| 33 | GO:0015035: protein disulfide oxidoreductase activity | 1.40E-02 |
| 34 | GO:0030170: pyridoxal phosphate binding | 1.73E-02 |
| 35 | GO:0008017: microtubule binding | 2.09E-02 |
| 36 | GO:0000287: magnesium ion binding | 2.72E-02 |
| 37 | GO:0052689: carboxylic ester hydrolase activity | 3.46E-02 |
| 38 | GO:0004722: protein serine/threonine phosphatase activity | 3.91E-02 |
| 39 | GO:0003735: structural constituent of ribosome | 4.08E-02 |
| 40 | GO:0003924: GTPase activity | 4.25E-02 |
| 41 | GO:0016787: hydrolase activity | 4.38E-02 |
| 42 | GO:0009055: electron carrier activity | 4.46E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 4.22E-20 |
| 2 | GO:0009570: chloroplast stroma | 1.03E-09 |
| 3 | GO:0009941: chloroplast envelope | 4.31E-08 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 4.25E-07 |
| 5 | GO:0009534: chloroplast thylakoid | 1.53E-06 |
| 6 | GO:0009579: thylakoid | 2.57E-05 |
| 7 | GO:0009543: chloroplast thylakoid lumen | 1.21E-04 |
| 8 | GO:0010007: magnesium chelatase complex | 1.58E-04 |
| 9 | GO:0031977: thylakoid lumen | 5.98E-04 |
| 10 | GO:0009533: chloroplast stromal thylakoid | 6.87E-04 |
| 11 | GO:0009538: photosystem I reaction center | 7.90E-04 |
| 12 | GO:0055028: cortical microtubule | 1.24E-03 |
| 13 | GO:0010287: plastoglobule | 1.41E-03 |
| 14 | GO:0009508: plastid chromosome | 1.62E-03 |
| 15 | GO:0030076: light-harvesting complex | 1.89E-03 |
| 16 | GO:0009522: photosystem I | 3.64E-03 |
| 17 | GO:0005840: ribosome | 3.85E-03 |
| 18 | GO:0009295: nucleoid | 4.75E-03 |
| 19 | GO:0015934: large ribosomal subunit | 6.83E-03 |
| 20 | GO:0022626: cytosolic ribosome | 9.66E-03 |
| 21 | GO:0009706: chloroplast inner membrane | 1.37E-02 |
| 22 | GO:0009705: plant-type vacuole membrane | 2.02E-02 |
| 23 | GO:0009536: plastid | 2.52E-02 |
| 24 | GO:0005874: microtubule | 3.14E-02 |