co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G62930

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032211: negative regulation of telomere maintenance via telomerase	0.00E+00
2	GO:0015822: ornithine transport	0.00E+00
3	GO:0046085: adenosine metabolic process	0.00E+00
4	GO:0000066: mitochondrial ornithine transport	5.03E-05
5	GO:2001006: regulation of cellulose biosynthetic process	5.03E-05
6	GO:0071668: plant-type cell wall assembly	1.23E-04
7	GO:0006432: phenylalanyl-tRNA aminoacylation	1.23E-04
8	GO:0006406: mRNA export from nucleus	1.25E-04
9	GO:0006760: folic acid-containing compound metabolic process	2.11E-04
10	GO:0010452: histone H3-K36 methylation	2.11E-04
11	GO:1904278: positive regulation of wax biosynthetic process	2.11E-04
12	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	3.09E-04
13	GO:0006457: protein folding	5.97E-04
14	GO:0042254: ribosome biogenesis	5.99E-04
15	GO:0051568: histone H3-K4 methylation	6.44E-04
16	GO:0043248: proteasome assembly	6.44E-04
17	GO:0006120: mitochondrial electron transport, NADH to ubiquinone	7.68E-04
18	GO:0000054: ribosomal subunit export from nucleus	7.68E-04
19	GO:0000028: ribosomal small subunit assembly	1.03E-03
20	GO:0009808: lignin metabolic process	1.17E-03
21	GO:0048589: developmental growth	1.32E-03
22	GO:0010267: production of ta-siRNAs involved in RNA interference	1.47E-03
23	GO:0016441: posttranscriptional gene silencing	1.63E-03
24	GO:0016925: protein sumoylation	1.96E-03
25	GO:0000398: mRNA splicing, via spliceosome	2.07E-03
26	GO:0006094: gluconeogenesis	2.14E-03
27	GO:0010020: chloroplast fission	2.32E-03
28	GO:0010039: response to iron ion	2.50E-03
29	GO:0034976: response to endoplasmic reticulum stress	2.69E-03
30	GO:0010431: seed maturation	3.29E-03
31	GO:0016226: iron-sulfur cluster assembly	3.50E-03
32	GO:0042147: retrograde transport, endosome to Golgi	4.15E-03
33	GO:0006414: translational elongation	4.20E-03
34	GO:0000413: protein peptidyl-prolyl isomerization	4.37E-03
35	GO:0006606: protein import into nucleus	4.37E-03
36	GO:0031047: gene silencing by RNA	5.56E-03
37	GO:0010286: heat acclimation	6.33E-03
38	GO:0006886: intracellular protein transport	7.22E-03
39	GO:0009910: negative regulation of flower development	9.12E-03
40	GO:0000724: double-strand break repair via homologous recombination	9.42E-03
41	GO:0009853: photorespiration	9.73E-03
42	GO:0006839: mitochondrial transport	1.07E-02
43	GO:0046686: response to cadmium ion	1.09E-02
44	GO:0000154: rRNA modification	1.26E-02
45	GO:0006412: translation	1.42E-02
46	GO:0006096: glycolytic process	1.62E-02
47	GO:0016569: covalent chromatin modification	1.77E-02
48	GO:0009793: embryo development ending in seed dormancy	1.79E-02
49	GO:0007623: circadian rhythm	2.72E-02
50	GO:0008380: RNA splicing	3.08E-02
51	GO:0042742: defense response to bacterium	3.12E-02
52	GO:0006979: response to oxidative stress	3.14E-02
53	GO:0015031: protein transport	3.95E-02
54	GO:0016192: vesicle-mediated transport	4.48E-02
55	GO:0006810: transport	4.56E-02
56	GO:0045454: cell redox homeostasis	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0000064: L-ornithine transmembrane transporter activity	1.23E-04
2	GO:0004826: phenylalanine-tRNA ligase activity	1.23E-04
3	GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity	1.23E-04
4	GO:0003735: structural constituent of ribosome	1.29E-04
5	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	2.11E-04
6	GO:0008430: selenium binding	2.11E-04
7	GO:0008649: rRNA methyltransferase activity	2.11E-04
8	GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	3.09E-04
9	GO:0016616: oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	4.15E-04
10	GO:0005496: steroid binding	5.26E-04
11	GO:0031386: protein tag	5.26E-04
12	GO:0042162: telomeric DNA binding	8.97E-04
13	GO:0008143: poly(A) binding	8.97E-04
14	GO:0035064: methylated histone binding	1.03E-03
15	GO:0043621: protein self-association	1.04E-03
16	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.11E-03
17	GO:0001055: RNA polymerase II activity	1.47E-03
18	GO:0001054: RNA polymerase I activity	1.79E-03
19	GO:0001056: RNA polymerase III activity	1.96E-03
20	GO:0000049: tRNA binding	1.96E-03
21	GO:0003723: RNA binding	2.17E-03
22	GO:0000166: nucleotide binding	2.53E-03
23	GO:0004298: threonine-type endopeptidase activity	3.29E-03
24	GO:0003756: protein disulfide isomerase activity	3.93E-03
25	GO:0008233: peptidase activity	5.75E-03
26	GO:0003746: translation elongation factor activity	9.73E-03
27	GO:0003697: single-stranded DNA binding	9.73E-03
28	GO:0050661: NADP binding	1.07E-02
29	GO:0051287: NAD binding	1.33E-02
30	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.44E-02
31	GO:0003779: actin binding	1.80E-02
32	GO:0019843: rRNA binding	2.16E-02
33	GO:0008565: protein transporter activity	2.46E-02
34	GO:0005515: protein binding	3.56E-02
35	GO:0020037: heme binding	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0097361: CIA complex	0.00E+00
2	GO:0000306: extrinsic component of vacuolar membrane	0.00E+00
3	GO:0005829: cytosol	6.61E-06
4	GO:0022626: cytosolic ribosome	4.10E-05
5	GO:0005697: telomerase holoenzyme complex	1.23E-04
6	GO:0005853: eukaryotic translation elongation factor 1 complex	2.11E-04
7	GO:0005840: ribosome	2.19E-04
8	GO:1990726: Lsm1-7-Pat1 complex	3.09E-04
9	GO:0016593: Cdc73/Paf1 complex	4.15E-04
10	GO:0032586: protein storage vacuole membrane	4.15E-04
11	GO:0000445: THO complex part of transcription export complex	4.15E-04
12	GO:0030904: retromer complex	6.44E-04
13	GO:0031902: late endosome membrane	8.91E-04
14	GO:0000347: THO complex	8.97E-04
15	GO:0005688: U6 snRNP	1.03E-03
16	GO:0019773: proteasome core complex, alpha-subunit complex	1.17E-03
17	GO:0046540: U4/U6 x U5 tri-snRNP complex	1.17E-03
18	GO:0000502: proteasome complex	1.28E-03
19	GO:0005763: mitochondrial small ribosomal subunit	1.32E-03
20	GO:0005736: DNA-directed RNA polymerase I complex	1.32E-03
21	GO:0005666: DNA-directed RNA polymerase III complex	1.47E-03
22	GO:0071011: precatalytic spliceosome	1.47E-03
23	GO:0005834: heterotrimeric G-protein complex	1.59E-03
24	GO:0008541: proteasome regulatory particle, lid subcomplex	1.79E-03
25	GO:0071013: catalytic step 2 spliceosome	1.79E-03
26	GO:0005732: small nucleolar ribonucleoprotein complex	1.96E-03
27	GO:0005665: DNA-directed RNA polymerase II, core complex	1.96E-03
28	GO:0009508: plastid chromosome	2.14E-03
29	GO:0005623: cell	2.30E-03
30	GO:0005750: mitochondrial respiratory chain complex III	2.32E-03
31	GO:0005753: mitochondrial proton-transporting ATP synthase complex	2.50E-03
32	GO:0000419: DNA-directed RNA polymerase V complex	2.69E-03
33	GO:0045271: respiratory chain complex I	3.08E-03
34	GO:0005839: proteasome core complex	3.29E-03
35	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	5.18E-03
36	GO:0005737: cytoplasm	6.02E-03
37	GO:0009295: nucleoid	6.33E-03
38	GO:0000932: P-body	6.85E-03
39	GO:0005730: nucleolus	1.21E-02
40	GO:0005856: cytoskeleton	1.26E-02
41	GO:0031966: mitochondrial membrane	1.37E-02
42	GO:0016607: nuclear speck	1.65E-02
43	GO:0005747: mitochondrial respiratory chain complex I	1.65E-02
44	GO:0012505: endomembrane system	1.80E-02
45	GO:0009706: chloroplast inner membrane	1.84E-02
46	GO:0005622: intracellular	2.74E-02
47	GO:0005774: vacuolar membrane	2.97E-02
48	GO:0022627: cytosolic small ribosomal subunit	3.32E-02
49	GO:0005874: microtubule	4.22E-02
50	GO:0022625: cytosolic large ribosomal subunit	4.48E-02